Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	MTFMT	Gene	0	37.12	35.35	42.38	72.19	118.51	75.37	57.49	43.85	35.54	47.23	45.81	35.62	55.29	42.88	52.78	38.14	33.06	25.42	58.35	21.93	59.47	34.84	34.87	51.08	46.10	40.12	67.92	58.78	25.29
2	220058	Transcript	0	74.59	60.53	81.51	134.48	236.00	150.79	120.02	94.82	49.73	97.18	94.96	75.73	101.16	87.43	96.82	79.57	57.95	55.06	113.58	39.43	122.93	73.49	71.57	92.72	94.64	73.50	150.20	112.53	45.78
3	ER1a	ExonRegion	0	45.47	11.48	28.35	80.84	153.92	27.25	25.93	29.91	4.39	20.83	9.54	13.32	36.93	25.38	22.52	18.67	12.29	21.98	14.08	20.13	15.37	33.29	20.24	20.03	15.83	30.16	12.10	44.16	13.37
4	E1_Da	NovelBoundary	0	8.79	0.00	1.45	0.00	0.00	1.96	0.00	2.34	0.00	0.00	0.00	0.00	2.96	1.31	0.00	7.50	3.71	0.00	0.00	0.00	1.48	0.00	4.88	2.75	0.00	0.00	1.89	0.00	0.00
5	E1a_E2a	KnownJunction	0	68.31	45.28	25.14	21.57	32.27	93.81	35.70	86.99	18.36	37.95	28.38	28.73	87.35	61.95	72.55	59.82	32.41	67.04	16.18	31.67	75.21	39.38	31.27	52.88	68.04	65.27	16.45	34.33	36.02
6	E1a_E3a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.04	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.62	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
7	E2_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.86	0.00	0.00	0.00	0.00	0.00	0.00	3.05	1.89	0.00	0.00	0.00	0.00
8	ER2a	ExonRegion	0	90.54	58.71	84.78	98.62	205.07	132.92	112.30	110.41	25.68	85.13	73.68	64.87	110.97	92.28	65.23	79.67	60.53	59.66	87.59	44.45	93.09	68.38	77.85	75.74	94.51	81.84	80.70	111.53	46.20
9	E2_Da	NovelBoundary	0	2.83	3.49	2.67	0.00	7.22	0.00	0.00	0.00	1.37	0.00	3.10	1.63	4.30	1.84	0.00	0.00	3.69	0.00	8.09	0.00	0.00	0.00	0.00	3.05	0.00	0.00	0.00	0.00	0.00
10	E2a_E3a	KnownJunction	0	89.36	52.55	78.31	236.83	286.49	104.36	91.60	96.20	22.57	64.63	63.36	65.60	78.40	83.93	74.74	67.24	44.88	46.23	121.39	49.54	108.06	71.71	75.30	102.05	110.25	63.13	46.96	105.50	40.87
11	E2a_E4a	NovelJunction	0	5.72	0.00	2.67	10.14	26.67	5.06	0.00	16.17	1.25	0.00	0.00	2.68	0.00	4.05	0.00	6.58	0.00	0.00	0.00	0.00	5.70	2.19	4.53	2.45	5.27	0.00	0.00	0.00	0.00
12	E2a_E5a	NovelJunction	0	2.42	0.00	0.00	0.00	0.00	3.64	2.23	0.00	0.00	0.00	0.00	0.00	0.00	1.37	0.00	0.00	0.00	0.00	0.00	0.00	5.62	0.00	0.00	0.00	1.63	0.00	0.00	1.66	0.00
13	I2_SR1	SilentIntronRegion	0	1.87	2.12	0.82	1.76	0.30	1.01	0.49	0.34	0.34	0.62	0.22	0.95	1.28	2.69	1.19	2.29	2.11	1.46	0.39	0.34	2.36	0.00	0.22	1.32	0.88	0.58	0.56	1.92	0.82
14	E3_Aa	NovelBoundary	0	3.01	0.00	0.00	0.00	0.00	1.57	0.00	2.54	0.00	0.00	0.00	0.00	0.00	0.89	9.97	0.00	2.99	0.00	0.00	0.00	2.01	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
15	ER3a	ExonRegion	0	94.45	77.29	92.03	225.44	326.27	212.17	177.42	145.85	42.51	117.53	124.58	85.66	103.76	104.86	94.76	101.09	67.89	58.87	118.92	40.13	155.89	86.34	97.76	100.84	127.00	93.77	149.43	128.00	47.97
16	E3_Da	NovelBoundary	0	3.01	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.48	0.00	0.00	0.00	0.00	16.18	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
17	E3a_E4a	KnownJunction	0	134.90	128.65	117.08	195.42	562.22	397.03	284.30	195.43	73.15	219.74	221.41	115.60	124.48	119.93	191.55	187.42	108.34	106.98	177.36	26.88	288.59	132.97	148.68	125.01	163.47	121.40	354.29	222.41	79.79
18	E3a_E5a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.28	0.00	0.00	0.00	1.00	0.00	0.00	1.28	0.00	0.00	2.98	1.97	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
19	E4_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	1.69	0.00	2.19	3.87	1.72	0.00	0.00	0.00	0.97	0.00	0.00	2.09	4.62	16.18	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
20	ER4a	ExonRegion	0	102.93	53.80	123.02	163.79	282.74	181.11	144.90	127.96	45.80	117.70	127.12	93.31	87.95	91.91	97.11	74.40	68.37	49.65	135.20	38.04	153.65	86.02	85.57	112.47	113.56	114.90	191.28	146.78	51.86
21	E4_Da	NovelBoundary	0	5.60	0.00	0.00	10.57	0.00	1.53	0.00	2.29	1.43	1.52	1.61	4.07	0.00	1.88	0.00	6.50	6.75	0.00	0.00	0.00	0.00	0.00	0.00	3.05	0.00	0.00	0.00	5.71	0.00
22	E4a_E5a	KnownJunction	0	82.82	57.69	81.05	147.53	196.00	174.80	135.89	103.41	49.12	85.40	91.90	97.38	82.22	80.67	77.34	61.73	47.27	32.62	64.74	17.86	127.79	97.67	76.19	81.65	81.83	89.65	176.18	133.49	32.02
23	E5_Aa	NovelBoundary	0	2.89	9.31	0.00	0.00	0.00	1.61	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.98	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
24	ER5a	ExonRegion	0	66.76	53.03	91.01	129.41	167.80	134.32	122.30	85.51	29.70	77.64	81.30	75.82	86.66	84.50	86.15	67.70	54.59	57.64	97.60	25.26	115.93	81.22	84.63	90.18	72.07	73.97	116.69	102.16	38.66
25	E5_Da	NovelBoundary	0	2.30	3.78	0.00	0.00	0.00	0.00	0.00	4.98	1.49	2.04	3.20	0.00	2.77	1.15	0.00	0.00	3.06	0.00	0.00	0.00	4.09	0.00	0.00	0.00	0.00	5.28	0.00	2.20	2.91
26	E5a_E6a	KnownJunction	0	72.97	40.43	122.58	112.59	202.49	130.14	123.64	110.08	49.33	88.64	67.03	55.78	90.34	100.81	147.90	81.47	57.65	78.60	97.11	33.33	115.12	83.28	58.56	98.28	97.14	62.65	116.04	81.46	51.77
27	E5a_E7a	NovelJunction	0	0.00	0.00	1.40	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.29	0.00
28	E6_Aa	NovelBoundary	0	2.71	0.00	0.00	0.00	0.00	3.57	0.00	0.00	1.49	0.00	0.00	0.00	1.53	2.02	0.00	2.91	2.54	0.00	0.00	0.00	0.00	0.00	0.00	2.45	0.00	0.00	0.00	0.00	0.00
29	ER6a	ExonRegion	0	101.75	52.49	101.95	177.17	218.81	138.84	116.17	113.99	51.40	107.81	119.74	81.98	112.69	90.82	120.35	67.01	62.53	59.45	149.75	47.20	130.16	86.53	64.66	129.23	113.74	91.72	196.61	148.30	65.14
30	E6_Da	NovelBoundary	0	2.65	0.00	0.00	0.00	0.00	3.38	2.63	0.00	1.77	1.92	4.75	0.00	1.97	3.23	8.57	6.50	2.39	27.74	0.00	0.00	0.00	0.00	0.00	2.93	0.00	0.00	0.00	0.00	0.00
31	E6a_E7a	KnownJunction	0	70.90	82.50	69.71	81.32	228.13	141.61	132.40	60.47	44.28	130.66	142.36	99.09	132.31	106.82	102.05	66.17	54.63	70.12	178.03	61.03	143.35	87.37	80.08	88.53	84.18	72.18	214.99	158.88	63.65
32	E6a_E8a	NovelJunction	0	0.00	0.00	0.00	10.78	0.00	0.00	0.00	0.00	0.00	2.04	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.87	0.00	0.00	0.00	0.00	0.00
33	I6	Intron	0	1.60	2.70	0.68	2.07	1.64	4.36	1.60	0.62	2.78	1.49	1.32	1.11	0.59	2.54	7.03	4.77	3.80	1.87	5.22	0.78	3.33	0.13	0.35	2.79	1.10	0.76	0.79	1.02	0.05
34	I6_AR1	ActiveIntronRegion	0	1.36	3.51	0.76	0.65	2.22	5.49	2.74	1.34	4.38	1.18	1.40	0.45	1.70	2.09	11.92	2.70	3.66	2.62	7.25	1.50	4.53	0.00	0.49	1.76	0.65	0.43	1.99	0.89	0.00
35	I6_SR1	SilentIntronRegion	0	1.69	2.41	0.66	2.58	1.44	3.96	1.19	0.36	2.20	1.61	1.29	1.35	0.19	2.71	5.27	5.52	3.86	1.60	4.50	0.52	2.90	0.18	0.30	3.17	1.26	0.88	0.36	1.07	0.07
36	E7_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	5.26	0.00	0.00	2.59	3.75	1.23	0.00	0.00	2.50	7.57	0.00	5.27	0.00	24.28	0.00	2.05	0.00	0.00	2.93	7.16	2.02	0.00	8.36	0.00
37	ER7a	ExonRegion	0	64.06	59.34	97.85	144.12	225.62	168.46	169.50	92.80	87.39	115.14	117.41	100.38	154.09	118.09	89.54	99.63	79.87	45.22	135.72	52.26	142.95	71.49	93.50	110.36	103.36	92.75	215.56	132.71	70.00
38	E7_Da	NovelBoundary	0	0.00	0.00	0.00	10.57	7.37	3.53	0.00	2.44	5.91	3.52	0.00	4.79	12.16	2.86	26.71	3.82	6.69	9.25	32.37	0.00	13.76	0.00	2.51	0.00	0.00	0.00	0.00	0.00	0.00
39	E7a_E8a	KnownJunction	0	84.82	72.13	115.03	237.48	431.50	208.34	159.63	118.14	121.78	137.25	101.96	99.85	167.25	107.50	149.29	137.16	78.33	73.72	161.85	80.30	157.11	85.23	94.56	119.99	144.12	73.77	298.83	142.16	50.54
40	E7a_E9a	NovelJunction	0	0.00	0.00	0.00	21.57	0.00	3.91	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.86	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.16	0.00
41	I7	Intron	0	3.41	4.21	1.74	5.46	5.41	7.61	4.32	1.53	5.31	5.10	1.15	1.45	0.58	3.91	12.84	3.68	12.19	4.00	7.96	0.95	5.82	0.25	0.50	10.12	2.97	1.74	2.41	4.06	1.66
42	I7_SR1	SilentIntronRegion	0	3.42	4.22	1.74	5.47	5.42	7.63	4.34	1.53	5.33	5.11	1.16	1.46	0.58	3.93	12.88	3.69	12.23	4.01	7.98	0.96	5.84	0.25	0.50	10.15	2.97	1.74	2.41	4.07	1.67
43	E8_Aa	NovelBoundary	0	3.01	4.65	0.00	21.14	0.00	21.83	0.00	8.86	5.27	9.39	1.27	0.00	0.00	2.97	47.44	7.57	27.53	0.00	24.28	0.00	0.00	0.00	0.00	16.03	1.86	4.38	0.00	2.07	8.09
44	ER8a	ExonRegion	0	48.37	86.71	67.35	181.41	265.76	149.18	106.03	67.34	75.64	102.53	104.30	88.10	121.92	94.88	118.76	75.86	61.24	38.73	143.46	54.22	127.58	68.70	61.79	118.83	112.56	56.56	185.60	96.07	42.24
45	E8_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.02	0.00	3.29	0.95	4.62	8.09	0.00	0.00	0.00	0.00	2.99	0.00	0.00	0.00	0.00	0.00
46	E8a_E9a	KnownJunction	0	34.45	70.39	68.54	17.47	167.27	123.74	74.44	50.71	69.40	116.64	114.68	103.40	108.65	100.08	96.07	85.83	72.32	56.25	193.99	35.23	104.17	53.38	49.45	116.82	83.04	44.85	141.99	92.51	32.45
47	E9_Aa	NovelBoundary	0	0.00	0.00	1.40	0.00	0.00	0.00	0.00	0.00	0.00	1.56	0.00	0.00	0.00	0.00	7.77	0.00	0.00	0.00	0.00	0.00	2.05	0.00	0.00	0.00	1.67	1.89	12.62	0.00	0.00
48	ER9a	ExonRegion	0	15.17	26.50	21.93	35.14	59.67	45.39	28.22	16.70	34.98	26.88	25.51	18.54	33.67	21.81	39.96	21.78	22.05	13.25	37.89	12.83	35.79	16.33	16.56	33.42	24.21	20.87	39.67	32.59	15.69