Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	CRIP1	Gene	0	471.69	42.59	162.87	56.68	22.25	56.87	235.40	241.38	54.92	45.34	20.80	31.82	122.63	727.12	124.35	116.15	54.69	37.97	51.56	49.01	41.45	386.17	70.52	78.15	174.87	207.60	58.68	160.52	148.91
2	496700	Transcript	0	24.03	0.00	9.16	3.29	0.23	3.70	9.91	11.33	0.24	1.76	0.11	0.54	0.34	152.71	5.12	18.06	2.63	1.64	1.68	1.35	1.39	12.11	1.69	2.04	5.47	7.02	2.90	6.62	4.17
3	409393	Transcript	1	32.68	0.00	106.34	8.63	0.00	16.92	66.54	33.49	12.91	8.63	6.86	1.33	2.52	269.96	0.00	43.83	11.10	0.00	0.00	0.00	9.47	49.74	14.82	2.99	69.86	235.90	6.81	124.51	126.24
4	392531	Transcript	1	32.91	0.00	32.39	0.00	0.00	3.45	7.27	12.09	3.11	1.88	1.27	0.00	1.78	134.91	0.00	26.55	7.45	0.00	0.00	3.31	0.00	24.79	10.05	5.32	49.89	26.22	7.36	30.55	57.94
5	330233	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
6	460900	Transcript	0	43.05	5.15	1.92	1.67	0.12	5.18	5.34	20.41	5.08	2.50	0.42	1.58	9.06	78.27	9.04	5.58	6.07	2.70	1.42	4.88	1.94	35.06	1.57	8.35	10.21	10.43	0.62	3.16	6.31
7	461556	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
8	ER1a	ExonRegion	0	9.33	0.00	4.23	1.33	0.45	1.42	3.38	6.10	0.10	0.72	0.22	0.68	0.26	35.50	2.56	7.59	0.40	1.98	0.72	0.21	0.54	6.53	1.24	0.82	3.11	5.98	1.79	7.58	2.75
9	E1_Ab	KnownBoundary	1	78.80	0.00	71.43	41.63	0.00	5.26	48.80	52.90	0.00	3.87	0.00	0.00	4.27	544.45	36.67	40.93	2.05	0.00	0.00	0.00	2.05	72.68	13.89	8.73	54.71	115.83	24.15	192.58	25.95
10	ER1b	ExonRegion	1	232.44	6.70	176.14	45.48	8.67	14.90	147.11	93.45	4.61	14.67	15.83	7.47	14.55	893.57	82.78	280.15	28.09	18.23	34.03	3.65	12.67	172.99	63.80	18.97	144.59	265.01	114.43	331.94	203.85
11	E1_Ac	KnownBoundary	0	655.86	18.42	345.99	93.39	28.15	56.90	410.52	215.64	16.75	55.01	56.25	23.40	35.67	1499.51	180.98	847.15	77.34	52.01	97.11	14.56	51.30	511.75	171.34	48.45	412.65	810.43	361.30	591.79	579.39
12	ER1c	ExonRegion	0	439.14	9.62	357.10	49.06	10.23	43.01	347.26	138.65	17.67	50.58	42.32	13.40	26.62	1030.87	63.54	465.42	62.82	16.33	24.52	11.60	36.80	367.63	117.83	34.93	273.94	559.81	140.16	350.67	416.61
13	E1_Da	KnownBoundary	0	32.80	0.00	24.59	9.06	0.00	3.41	7.72	6.82	0.00	0.00	0.00	0.00	0.00	147.47	0.00	16.52	2.45	0.00	0.00	3.23	1.60	8.56	2.17	0.00	5.30	8.33	4.62	2.29	7.53
14	E1a_E1f	KnownJunction	1	32.91	0.00	32.39	0.00	0.00	3.45	7.27	12.09	3.11	1.88	1.27	0.00	1.78	134.91	0.00	26.55	7.45	0.00	0.00	3.31	0.00	24.79	10.05	5.32	49.89	26.22	7.36	30.55	57.94
15	E1a_E1g	KnownJunction	1	32.68	0.00	106.34	8.63	0.00	16.92	66.54	33.49	12.91	8.63	6.86	1.33	2.52	269.96	0.00	43.83	11.10	0.00	0.00	0.00	9.47	49.74	14.82	2.99	69.86	235.90	6.81	124.51	126.24
16	E1a_E1i	NovelJunction	0	31.85	4.75	52.57	0.00	0.00	4.91	4.58	4.68	0.00	0.00	0.00	0.00	0.00	81.36	0.00	9.64	1.73	4.62	0.00	0.00	0.00	6.81	0.00	2.27	17.05	41.33	11.43	2.29	0.00
17	ER1d	ExonRegion	0	38.72	0.00	14.08	5.25	0.00	5.97	16.45	16.57	0.37	2.79	0.00	0.40	0.42	269.92	7.68	28.54	4.87	1.29	2.64	2.49	2.24	17.68	2.13	3.27	7.84	8.07	4.02	5.66	5.59
18	E1_Ad	KnownBoundary	0	18.82	0.00	13.30	0.00	0.00	6.91	27.41	4.58	0.00	7.79	0.00	0.00	0.00	257.73	17.94	41.46	10.53	0.00	0.00	4.13	3.21	4.13	9.60	4.79	12.16	8.33	7.40	10.83	9.90
19	ER1e	ExonRegion	0	69.62	2.57	18.28	32.85	1.59	12.93	112.91	28.87	13.58	10.04	3.88	2.83	52.64	312.12	16.64	59.27	13.72	8.70	13.05	5.95	15.77	45.20	30.85	9.29	26.23	62.20	13.75	125.73	30.38
20	E1_Ae	KnownBoundary	1	34.86	0.00	10.24	85.41	0.00	3.64	77.93	13.29	4.23	7.59	5.60	1.48	36.78	156.63	0.00	46.21	5.81	0.00	0.00	8.27	14.96	37.68	17.88	10.89	19.44	51.24	12.03	121.14	23.93
21	E1_Af	KnownBoundary	1	29.67	4.85	3.09	0.00	0.00	5.83	60.93	7.46	6.70	0.00	3.23	3.40	24.52	41.41	0.00	3.75	0.00	0.00	0.00	0.00	6.10	19.59	9.85	9.15	9.58	28.28	0.00	95.43	5.38
22	E1_Ag	KnownBoundary	0	266.32	4.85	128.01	124.67	50.84	65.26	303.47	82.36	99.31	35.99	10.57	20.03	184.06	514.08	63.98	105.95	37.03	0.00	8.09	11.33	57.32	203.66	120.17	15.91	66.45	253.41	26.59	403.48	94.35
23	ER1f	ExonRegion	0	230.42	3.28	61.71	80.44	14.94	55.67	362.83	85.61	68.53	29.60	13.69	13.61	189.01	485.72	61.61	145.52	30.05	30.02	22.63	12.65	57.06	203.71	103.07	22.59	83.62	214.53	21.98	443.37	87.24
24	ER1g	ExonRegion	0	240.99	3.75	243.57	139.99	43.05	59.60	363.70	91.66	70.86	29.60	13.94	18.73	194.02	510.41	56.41	150.58	41.93	29.44	14.55	10.04	53.59	216.84	122.19	23.36	98.01	242.93	43.17	467.01	122.33
25	ER1h	ExonRegion	0	168.14	13.79	1256.33	384.00	171.40	38.33	329.58	71.22	42.11	40.46	36.58	81.97	244.20	653.62	109.34	129.63	119.18	23.99	38.42	10.23	24.70	145.29	209.88	17.03	93.74	362.83	221.36	395.19	342.32
26	E1_Db	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
27	E1b_E1i	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
28	ER1i	ExonRegion	0	35.47	1.79	13.99	7.56	2.57	10.82	26.75	10.00	4.99	8.65	2.29	2.10	6.44	57.71	19.34	23.65	7.62	4.15	4.35	3.19	3.20	24.41	6.02	8.32	5.22	11.82	2.42	14.39	4.82
29	E1_Ah	KnownBoundary	0	201.79	25.79	184.30	129.42	34.34	99.68	383.11	82.51	72.57	97.59	29.83	21.66	86.68	149.38	157.06	176.25	103.43	9.25	15.96	22.08	51.06	302.25	68.90	72.26	59.06	130.63	25.35	206.64	54.41
30	ER1j	ExonRegion	0	118.28	25.95	64.12	13.29	6.27	49.42	158.87	66.54	41.53	40.95	14.70	16.47	46.69	139.56	90.09	83.18	62.65	24.12	19.68	30.70	21.03	149.62	27.66	42.18	56.80	70.98	21.14	80.15	40.97
31	E1_Ai	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
32	ER1k	ExonRegion	0	1724.13	174.69	200.19	78.73	41.65	340.49	1712.04	1053.24	305.66	279.02	130.54	188.61	670.75	2686.12	629.12	759.68	283.86	175.36	237.17	193.10	247.90	1259.33	397.16	232.44	905.48	1232.99	324.08	904.79	863.36
33	E1_Dc	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
34	E1c_E1j	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
35	ER1l	ExonRegion	0	107.51	10.41	2.78	0.72	0.42	13.96	51.47	51.55	11.96	10.21	1.94	4.09	19.41	167.56	23.98	30.37	12.27	10.34	5.55	9.62	8.94	64.54	14.06	17.30	33.04	29.95	2.58	21.37	24.46
36	E1_Aj	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
37	ER1m	ExonRegion	0	4190.72	369.70	91.75	42.08	22.46	318.78	951.43	2158.52	376.58	238.12	77.34	123.28	788.46	4369.74	795.19	498.51	257.20	269.04	466.00	439.16	296.01	2728.21	281.01	655.38	1414.19	1150.10	100.12	648.01	775.73
38	E1_Dd	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
39	E1d_E1k	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
40	ER1n	ExonRegion	0	43.05	5.15	1.92	1.67	0.12	5.18	5.34	20.41	5.08	2.50	0.42	1.58	9.06	78.27	9.04	5.58	6.07	2.70	1.42	4.88	1.94	35.06	1.57	8.35	10.21	10.43	0.62	3.16	6.31
41	E1_Ak	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
42	ER1o	ExonRegion	0	2764.37	234.98	174.15	83.85	22.14	212.83	709.32	1305.61	185.08	104.43	75.56	166.84	660.45	4609.25	463.48	316.12	232.44	119.72	152.77	240.91	135.44	3580.68	332.00	418.90	520.72	571.55	226.74	459.85	658.62
43	E1e_E2a	KnownJunction	0	2670.86	233.07	299.33	135.89	51.73	307.06	1263.07	1483.57	265.76	191.82	166.81	248.28	820.31	4850.39	848.50	487.37	298.25	179.93	290.65	245.45	182.42	4278.32	511.46	363.08	675.19	1018.40	507.66	798.93	853.53
44	Ix	Intron	0	3.74	0.00	0.00	0.00	0.00	2.40	0.00	3.86	0.78	0.00	0.00	0.64	0.00	9.02	1.92	0.87	0.52	0.79	0.00	0.00	0.00	2.52	2.53	3.01	0.00	2.20	0.00	0.57	0.00
45	Ix_SR1	SilentIntronRegion	0	3.80	0.00	0.00	0.00	0.00	2.43	0.00	3.91	0.80	0.00	0.00	0.65	0.00	9.14	1.94	0.88	0.53	0.80	0.00	0.00	0.00	2.55	2.56	3.05	0.00	2.23	0.00	0.58	0.00
46	E2_Aa	NovelBoundary	0	5.31	4.07	0.00	0.00	0.00	3.38	2.92	2.09	0.00	1.60	0.00	1.36	0.00	19.52	0.00	0.00	2.52	0.00	0.00	0.00	1.64	6.13	2.02	2.81	0.00	2.19	0.00	0.00	0.00
47	ER2a	ExonRegion	0	3672.56	219.40	1579.61	482.92	184.51	365.48	1542.26	2039.53	428.71	243.86	120.39	253.77	868.60	5537.31	710.91	393.69	310.96	224.22	227.72	338.13	295.92	3218.01	461.96	627.46	1216.25	1301.06	454.12	915.29	935.99
48	E2_Da	KnownBoundary	0	5228.12	321.39	2483.24	1003.40	420.89	421.47	1907.25	2472.62	672.06	314.53	156.65	302.01	1178.72	6557.87	1123.17	378.13	469.72	269.70	169.94	571.37	416.71	3215.35	474.96	997.66	2229.28	1975.04	444.25	1335.36	1199.05
49	ER2b	ExonRegion	0	3291.60	461.49	1130.71	616.75	242.51	255.75	898.00	1411.95	271.01	315.79	131.95	142.22	665.37	4644.34	994.05	397.38	191.88	360.89	623.79	405.93	237.93	2058.81	315.06	638.30	1377.45	1218.98	251.50	757.59	718.95
50	ER2c	ExonRegion	0	346.17	45.17	69.01	56.67	13.70	20.28	90.71	122.43	13.76	47.64	21.42	15.77	49.36	581.42	126.01	73.39	20.03	47.08	81.46	33.03	17.47	230.75	37.07	60.23	113.99	115.91	25.18	46.86	56.04
51	ER2d	ExonRegion	0	84.67	13.14	19.08	25.59	0.00	6.87	22.17	18.41	2.81	10.83	5.95	1.24	5.20	80.73	19.60	2.53	2.00	4.09	9.05	0.00	1.43	59.49	4.52	10.76	18.58	35.36	0.00	6.52	12.75