Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	AL161662.2	Gene	0	4.82	9.00	8.25	3.61	3.04	8.70	2.75	4.85	10.46	10.14	4.19	6.26	4.00	13.38	6.97	9.14	9.66	13.21	8.49	3.14	5.67	4.23	4.90	8.61	6.20	9.87	7.15	10.54	6.96
2	380590	Transcript	0	20.46	29.62	38.48	35.54	30.67	55.38	30.63	25.31	51.12	17.73	9.41	25.29	10.72	17.01	73.36	34.34	55.17	62.06	16.58	15.34	21.19	38.23	17.90	25.82	10.17	27.96	20.49	24.39	18.92
3	IG42	Intergenic	0	1.84	2.63	7.62	1.67	1.82	4.28	0.94	1.46	3.67	5.97	2.05	3.99	1.88	7.94	1.11	7.84	5.41	7.72	5.87	1.13	2.92	2.81	2.82	3.55	3.62	6.03	2.85	6.67	2.37
4	IG42_AR8	ActiveIntergenicRegion	0	1.23	3.63	5.66	0.00	1.38	4.31	0.32	3.11	0.32	6.24	2.21	4.41	1.58	7.85	1.39	6.31	4.20	8.20	4.50	1.27	1.53	1.84	4.67	1.91	1.57	4.71	3.10	4.91	1.26
5	IG42_SR4	SilentIntergenicRegion	0	1.48	0.04	6.85	1.06	1.69	1.73	1.63	2.38	1.96	4.50	0.78	2.71	0.61	7.34	0.08	5.60	4.58	7.26	3.62	0.74	1.94	1.20	2.04	2.51	1.78	2.54	0.81	2.90	0.94
6	IG42_AR7	ActiveIntergenicRegion	0	2.07	2.76	4.59	0.00	5.24	1.75	1.16	1.24	2.36	8.31	0.70	3.98	1.33	9.94	1.35	6.17	1.03	7.42	8.77	2.78	1.67	0.99	2.76	7.54	3.65	1.59	1.07	6.34	1.94
7	IG42_AR6	ActiveIntergenicRegion	0	1.85	2.14	6.47	0.92	2.07	3.17	1.23	1.61	2.75	6.07	0.42	5.61	0.67	7.19	0.00	9.25	6.21	7.78	7.68	1.09	1.54	2.74	2.79	3.58	2.51	5.14	1.77	7.75	1.81
8	IG42_SR3	SilentIntergenicRegion	0	1.26	4.32	6.88	1.29	1.63	5.34	0.77	1.08	5.02	5.14	2.04	3.20	2.67	8.58	1.90	7.45	5.76	5.99	5.83	0.77	4.67	4.33	2.60	2.62	3.48	8.76	3.45	8.56	1.93
9	IG42_AR5	ActiveIntergenicRegion	0	3.98	0.15	12.06	0.00	0.00	3.50	0.43	0.70	3.81	7.22	3.99	2.83	4.07	10.12	0.00	8.46	7.27	12.43	11.16	2.40	4.18	2.54	1.73	8.94	7.23	8.56	1.59	10.49	5.13
10	IG42_AR4	ActiveIntergenicRegion	0	4.18	0.00	12.40	0.00	0.00	3.47	2.02	0.00	6.26	4.61	4.53	4.83	2.35	6.18	0.00	3.13	9.49	5.72	4.53	0.00	4.21	0.77	1.03	0.31	6.53	3.74	1.66	10.63	10.29
11	IG42_SR2	SilentIntergenicRegion	0	2.14	0.00	13.96	0.00	0.00	3.36	1.57	0.00	8.36	2.25	2.64	3.99	1.30	8.77	0.00	2.53	9.46	5.46	2.51	0.00	2.85	2.20	0.00	0.00	4.92	6.99	4.27	8.33	12.97
12	IG42_AR3	ActiveIntergenicRegion	0	2.45	2.82	13.46	0.00	0.00	4.12	0.00	0.00	7.54	1.44	1.53	3.71	1.30	8.68	0.00	2.53	9.44	5.46	0.00	0.00	2.04	3.61	0.00	0.92	8.17	7.86	7.33	5.36	11.70
13	IG42_AR2	ActiveIntergenicRegion	0	3.55	3.31	13.35	8.75	3.51	5.13	0.06	0.00	5.76	7.77	4.16	3.92	1.90	8.12	1.97	11.57	7.21	11.55	3.44	0.99	4.55	4.66	3.48	4.48	7.39	6.12	2.90	8.94	3.76
14	IG42_AR1	ActiveIntergenicRegion	0	2.32	3.19	14.10	6.40	0.00	10.03	0.92	1.04	6.55	6.81	6.55	5.24	2.60	6.63	3.11	11.69	6.40	8.95	6.76	1.15	2.73	3.24	2.01	4.41	5.25	9.50	9.62	4.30	4.09
15	IG42_SR1	SilentIntergenicRegion	0	1.47	3.32	4.61	0.00	0.00	7.19	0.57	1.22	5.35	6.99	3.00	4.82	4.70	6.44	1.03	8.47	5.74	7.94	2.99	1.06	3.09	2.48	5.46	2.31	6.40	9.10	4.55	4.53	3.99
16	ER1a	ExonRegion	0	4.85	9.26	8.61	3.48	3.02	8.70	2.71	5.00	10.79	10.59	4.28	6.49	4.14	13.98	5.74	9.41	10.15	11.95	8.46	3.13	5.92	4.23	5.08	8.95	6.49	10.17	6.89	10.82	7.21
17	E1_Da	NovelBoundary	0	33.80	23.07	155.74	10.14	0.00	29.81	32.56	27.12	189.32	47.42	18.00	123.94	93.40	102.92	88.50	17.44	509.86	0.00	0.00	34.24	35.42	16.63	11.48	36.01	28.60	68.06	21.57	62.41	75.17
18	E1a_E2a	KnownJunction	0	52.26	75.62	105.49	97.06	85.48	148.83	85.59	68.93	138.44	41.02	21.42	67.41	26.72	34.96	183.97	89.66	155.02	136.91	32.15	39.45	56.60	106.23	47.18	66.34	23.26	69.48	42.49	57.11	47.31
19	I1	Intron	0	2.40	6.44	8.08	2.47	0.42	6.17	2.96	3.66	16.55	11.09	4.72	5.69	3.41	7.93	3.26	4.28	9.15	7.12	14.06	3.57	3.20	2.49	5.31	10.77	5.80	8.27	8.53	13.93	6.53
20	I1_AR1	ActiveIntronRegion	0	2.41	6.45	8.09	2.48	0.42	6.18	2.96	3.66	16.58	11.11	4.73	5.70	3.42	7.94	3.27	4.29	9.16	7.13	14.08	3.57	3.21	2.49	5.31	10.78	5.81	8.29	8.55	13.95	6.54
21	Ix	Intron	0	0.00	8.21	0.00	4.57	0.00	4.38	0.00	2.35	2.86	3.68	0.00	0.00	0.00	1.44	0.00	3.16	0.00	6.14	10.18	1.76	0.00	0.00	1.15	2.74	0.91	1.00	0.00	5.20	2.57
22	Ix_SR2	SilentIntronRegion	0	0.00	8.53	0.00	4.75	0.00	4.55	0.00	2.44	2.98	3.83	0.00	0.00	0.00	1.50	0.00	3.29	0.00	6.31	10.58	1.83	0.00	0.00	1.20	2.85	0.91	1.04	0.00	5.40	2.67
23	E2_Aa	NovelBoundary	0	151.24	143.10	343.53	82.61	60.13	155.35	130.91	128.50	430.93	268.71	103.79	258.97	177.85	207.85	183.57	159.88	734.91	13.49	8.09	114.70	217.20	88.58	127.41	167.96	140.78	273.71	111.17	262.67	218.05
24	ER2a	ExonRegion	0	4.27	3.97	1.34	6.07	3.52	8.62	3.59	2.01	4.12	1.57	2.53	1.98	1.31	2.09	30.38	3.96	0.35	37.31	9.14	3.45	1.05	4.23	1.43	2.17	0.76	4.24	12.10	5.23	2.25