Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	TRAPPC6B	Gene	0	26.41	37.06	19.02	45.17	70.83	44.27	33.77	13.34	16.91	32.52	26.40	25.91	13.46	37.18	26.74	45.11	23.04	38.22	74.55	56.79	46.44	17.67	21.71	22.99	25.41	19.80	32.66	32.31	26.20
2	469361	Transcript	0	3.18	2.23	2.85	8.84	10.96	4.25	2.07	1.35	1.87	3.97	1.08	1.68	0.94	3.27	2.27	6.72	3.98	6.44	4.80	4.36	4.96	1.54	1.05	2.24	2.35	2.65	2.04	3.99	1.79
3	416830	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
4	330149	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
5	347691	Transcript	0	17.22	35.48	7.10	63.84	66.32	49.07	27.29	14.58	21.65	18.85	27.74	32.83	22.90	27.98	36.28	25.02	18.89	23.12	64.74	75.09	42.40	10.94	15.42	16.63	31.44	12.27	9.69	22.78	18.12
6	IG27_AR3	ActiveIntergenicRegion	0	2.44	4.32	6.82	3.63	3.21	3.38	9.18	4.42	2.19	9.40	2.90	2.85	1.20	2.77	2.22	2.62	2.23	2.33	5.65	2.56	0.92	3.74	5.40	2.36	3.59	8.50	8.03	20.25	1.51
7	IG27_SR2	SilentIntergenicRegion	0	0.58	2.66	4.41	0.50	1.42	0.41	2.40	3.66	2.16	4.74	1.68	1.99	0.62	1.21	1.01	0.27	1.00	0.67	2.20	1.34	0.59	1.24	1.43	1.12	2.57	4.69	5.83	14.99	2.29
8	IG27_AR2	ActiveIntergenicRegion	0	0.00	0.00	0.83	0.00	0.00	0.68	1.00	1.82	0.56	2.14	0.00	0.61	0.00	0.67	2.28	2.11	0.00	0.00	1.58	1.36	0.00	0.00	0.90	1.07	1.42	2.33	2.72	4.04	0.00
9	ER1a	ExonRegion	0	5.04	0.36	7.48	16.86	24.41	2.99	3.18	3.00	2.03	6.92	1.41	3.75	2.57	3.92	0.72	11.89	3.56	7.60	3.02	5.50	4.74	3.91	2.93	0.67	2.29	5.74	5.62	8.31	3.25
10	E1_Ab	KnownBoundary	1	44.48	9.60	11.93	203.83	244.34	32.80	33.36	30.31	16.57	57.88	13.32	28.67	18.31	23.29	8.37	119.03	2.36	79.37	24.28	45.48	44.60	45.41	36.15	8.02	23.53	52.48	55.76	90.18	22.32
11	E1_Ac	KnownBoundary	1	56.33	14.54	66.42	95.55	109.64	18.95	14.30	34.74	3.08	17.90	36.54	16.20	8.28	21.18	16.54	79.25	22.17	5.39	0.00	32.58	21.78	29.75	16.94	6.10	8.98	34.55	15.01	47.90	18.36
12	ER1b	ExonRegion	1	77.23	17.70	105.15	255.47	277.36	37.29	34.66	54.82	14.46	59.80	45.42	40.26	27.61	44.62	24.03	136.99	33.83	87.33	43.94	66.82	50.57	64.03	43.57	10.27	28.96	71.99	41.95	112.05	44.68
13	E1_Ad	KnownBoundary	1	28.25	31.90	67.00	89.94	115.54	19.91	28.32	10.05	7.10	31.28	23.54	14.19	4.52	22.71	0.00	37.25	20.96	9.12	0.00	39.70	14.40	41.57	23.10	6.10	10.84	46.00	5.07	59.80	22.98
14	ER1c	ExonRegion	1	84.94	40.65	161.72	343.69	360.54	42.10	45.10	51.09	14.04	54.32	67.84	39.12	26.95	69.16	35.00	116.10	50.46	83.92	108.62	80.81	51.17	78.19	65.10	26.08	48.78	125.73	48.99	140.59	65.26
15	ER1d	ExonRegion	1	99.90	48.48	92.83	117.30	171.76	73.92	66.89	60.10	21.62	89.76	63.61	62.66	31.02	104.04	34.26	124.56	57.05	95.44	106.24	114.26	62.50	86.97	88.73	46.23	72.21	124.14	74.58	150.82	82.51
16	E1_Da	NovelBoundary	0	2.95	0.00	1.42	18.55	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.60	0.00	0.00	0.00	0.00	1.28	0.00	0.00	3.39	0.00	0.00	0.00	0.00	0.00	0.00	3.78	0.00	0.00
17	E1a_E2a	KnownJunction	1	86.12	88.71	205.87	112.59	262.62	97.03	69.34	60.71	34.11	91.36	58.94	70.45	43.28	114.11	58.80	123.62	55.31	127.02	105.20	168.29	82.91	66.27	73.04	61.49	102.63	73.98	54.07	143.74	97.85
18	E1a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
19	I1_AR1	ActiveIntronRegion	0	3.51	3.89	0.39	0.00	0.00	0.80	0.45	0.00	0.00	3.34	0.27	0.78	0.00	0.20	0.00	0.55	1.67	1.72	0.71	0.06	1.78	0.00	0.95	0.00	0.00	1.41	0.00	3.75	0.00
20	E2_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	2.75	0.00	0.00	0.00	0.00	0.00	0.00	1.13	0.00	0.00	1.37	4.62	0.00	0.00	1.93	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
21	ER2a	ExonRegion	0	121.07	129.13	205.54	247.77	386.66	111.71	88.37	61.22	36.86	95.84	73.80	75.85	52.15	162.71	57.08	118.35	52.65	132.49	202.60	205.84	119.38	95.49	69.96	79.59	117.65	77.73	72.97	111.83	97.62
22	E2_Da	KnownBoundary	0	20.53	18.03	11.26	19.63	18.72	20.64	16.25	9.41	17.85	5.87	1.61	4.31	3.25	28.74	17.74	15.99	10.22	13.87	48.33	32.91	30.20	6.51	4.43	11.25	18.07	9.83	0.00	10.60	14.62
23	E2a_E2b	KnownJunction	0	81.69	114.40	120.69	178.38	317.73	82.53	83.59	35.63	31.49	76.06	92.50	57.50	52.26	141.43	25.11	124.23	48.71	88.62	153.76	129.01	84.59	98.06	68.95	91.16	70.92	58.62	52.13	75.04	74.35
24	E2a_E3a	NovelJunction	0	0.00	0.00	2.59	0.00	0.00	1.53	0.00	0.00	0.00	3.60	0.00	1.69	0.00	3.57	0.00	9.03	0.00	0.00	0.00	0.00	2.05	2.04	0.00	3.05	0.00	0.00	0.00	0.00	0.00
25	E2a_E4a	NovelJunction	0	0.00	0.00	3.94	0.00	14.00	0.00	0.00	0.00	0.00	2.04	0.00	0.00	0.00	2.53	0.00	0.00	2.25	4.62	0.00	8.10	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.91
26	ER2b	ExonRegion	0	4.49	6.31	1.06	2.36	3.48	5.65	3.03	1.06	3.57	3.53	0.63	1.29	0.25	4.09	6.09	8.28	5.37	9.01	11.38	4.76	5.85	0.70	0.22	3.89	3.32	2.20	0.50	3.67	2.11
27	E2_Ab	KnownBoundary	0	5.01	18.13	2.14	0.00	0.00	11.36	0.00	0.00	1.58	2.04	0.00	0.00	0.00	1.13	0.00	11.17	7.34	0.00	8.09	7.53	5.74	0.00	0.00	2.63	0.00	0.00	0.00	2.07	3.66
28	ER2c	ExonRegion	0	109.37	145.97	55.24	216.88	316.09	122.11	100.44	49.79	48.63	134.65	111.12	104.79	71.70	166.87	104.83	161.90	85.93	149.73	229.39	213.25	135.93	88.44	91.66	98.99	119.51	67.86	104.84	123.48	90.17
29	E2_Db	NovelBoundary	0	2.71	0.00	0.00	0.00	0.00	1.96	0.00	0.00	0.00	2.04	0.00	0.00	0.00	1.29	0.00	6.88	1.19	0.00	8.09	0.00	1.52	0.00	0.00	3.05	0.00	0.00	0.00	0.00	0.00
30	E2b_E3a	KnownJunction	1	99.63	168.21	26.34	69.88	147.22	128.03	89.26	44.09	49.09	134.26	87.31	78.37	62.45	138.99	116.00	51.64	50.13	155.02	258.28	151.17	133.49	70.15	92.88	88.77	100.36	67.20	123.90	148.54	86.66
31	E2b_E4a	KnownJunction	0	17.22	35.48	7.10	63.84	66.32	49.07	27.29	14.58	21.65	18.85	27.74	32.83	22.90	27.98	36.28	25.02	18.89	23.12	64.74	75.09	42.40	10.94	15.42	16.63	31.44	12.27	9.69	22.78	18.12
32	E3_Aa	NovelBoundary	0	8.91	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.84	0.00	0.00	0.00	0.00	0.00	0.00	1.13	0.00	8.09	0.00	7.98	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
33	ER3a	ExonRegion	0	84.21	131.87	40.70	84.27	159.71	107.11	114.13	32.77	40.29	121.79	92.46	98.79	48.84	146.29	63.34	118.97	58.66	116.12	202.80	167.97	123.79	72.65	81.97	81.00	116.12	63.16	135.32	123.48	85.60
34	E3_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.97	2.57	0.00	0.00	3.40	13.87	0.00	0.00	6.14	0.00	0.00	2.51	0.00	0.00	0.00	0.00	2.05
35	E3a_E4a	KnownJunction	0	85.71	121.87	55.16	167.16	248.17	130.95	157.51	29.16	50.34	144.68	93.07	116.74	56.81	141.69	77.54	177.63	86.64	121.49	226.59	205.42	140.59	58.00	74.56	98.82	110.21	77.67	98.60	133.40	91.55
36	E4_Aa	NovelBoundary	0	0.00	4.27	0.00	0.00	21.81	4.83	2.92	0.00	2.44	1.64	0.00	0.00	0.00	0.00	0.00	3.44	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	5.07	0.00	0.00
37	ER4a	ExonRegion	0	99.10	156.59	91.05	233.07	266.30	136.87	123.43	48.96	52.69	133.76	125.15	112.54	65.63	140.73	93.01	136.39	80.78	124.61	278.96	222.01	165.48	60.20	84.66	113.30	101.82	60.64	123.41	123.83	88.41
38	E4_Da	NovelBoundary	0	3.01	9.70	2.19	8.63	0.00	0.00	0.00	0.00	1.55	3.32	1.61	0.00	0.00	0.97	8.37	0.00	5.38	4.62	8.09	4.13	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
39	E4a_E5a	KnownJunction	0	85.23	120.90	91.89	191.53	353.54	134.36	121.81	47.68	32.37	139.53	134.00	104.97	59.71	126.09	102.05	107.40	75.11	143.84	258.96	151.84	141.07	63.59	85.74	73.75	88.77	44.76	92.29	98.98	78.08
40	I4	Intron	0	2.65	7.53	0.92	6.41	2.69	6.05	3.60	0.25	6.67	2.38	1.56	1.23	0.13	4.10	5.76	10.39	13.13	5.21	13.17	2.95	5.59	0.00	0.50	1.63	3.93	1.51	1.51	3.81	0.74
41	I4_SR1	SilentIntronRegion	0	1.50	4.39	0.00	2.21	0.00	4.89	0.64	0.00	4.48	0.25	0.63	0.61	0.00	2.10	2.71	0.43	4.59	1.07	10.40	2.76	1.00	0.00	0.00	0.38	2.15	0.28	1.28	1.14	0.00
42	I4_AR1	ActiveIntronRegion	0	0.00	13.14	0.00	7.31	0.00	7.79	2.02	0.00	1.12	0.00	0.00	1.24	0.00	0.91	0.93	0.00	2.00	0.00	4.53	0.00	0.00	0.00	0.00	0.00	1.43	0.00	0.00	0.00	0.00
43	I4_SR2	SilentIntronRegion	0	3.09	11.16	1.94	11.22	5.66	7.94	5.99	0.53	8.65	4.06	2.53	1.66	0.28	4.94	5.89	19.10	20.39	7.60	16.52	1.84	9.24	0.00	1.05	2.81	5.37	2.88	1.85	6.60	1.37
44	I4_AR2	ActiveIntronRegion	0	4.88	3.36	0.00	1.29	0.00	2.43	4.01	0.00	6.49	2.90	0.92	1.59	0.00	7.54	15.45	9.46	13.40	9.66	9.95	8.12	6.61	0.00	0.00	1.21	4.30	0.33	1.07	1.88	0.69
45	E5_Aa	NovelBoundary	0	0.00	6.98	0.00	0.00	13.71	4.91	2.92	0.00	4.75	3.75	1.23	0.00	0.00	6.76	7.57	31.98	19.52	4.62	8.09	3.80	13.60	0.00	0.00	5.32	7.05	0.00	17.00	4.13	2.91
46	ER5a	ExonRegion	0	73.90	155.09	28.84	128.31	220.47	195.62	137.78	36.90	70.75	113.69	104.34	97.31	45.73	121.78	110.27	163.22	81.23	129.06	323.23	223.79	208.95	37.15	62.07	83.86	79.73	36.20	133.63	78.06	89.53
47	E5_Da	KnownBoundary	1	30.32	67.48	23.02	98.57	231.96	136.47	127.42	7.17	68.88	46.62	44.73	57.38	17.29	60.64	89.69	63.88	73.16	60.36	161.85	164.57	158.68	24.55	36.59	31.04	25.61	13.35	70.52	15.14	79.60
48	ER5b	ExonRegion	0	1.91	5.30	1.73	6.55	14.72	10.63	7.31	0.76	5.35	3.50	2.07	3.20	1.56	4.36	6.79	6.64	4.78	6.35	16.54	9.99	10.09	0.72	2.74	2.98	2.05	1.15	5.20	2.63	4.21
49	ER5c	ExonRegion	0	0.00	0.00	0.00	7.31	4.98	4.12	0.00	0.00	0.00	1.44	1.19	0.00	0.00	1.81	0.00	0.00	3.01	2.73	0.00	2.81	4.28	0.00	0.00	2.15	1.43	0.00	0.00	0.00	0.00