Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	SOCS4	Gene	0	79.56	115.41	31.97	114.73	75.30	124.42	91.31	58.46	63.08	92.13	78.99	102.84	49.70	65.43	130.86	83.65	51.42	57.19	190.19	57.88	149.32	34.16	40.05	46.83	71.58	33.01	107.90	35.66	47.19
2	339298	Transcript	0	33.73	20.04	27.44	20.01	17.14	36.28	33.23	37.73	13.83	35.19	25.98	17.29	14.76	22.94	9.21	29.85	13.07	11.65	34.39	25.08	54.97	25.21	27.44	4.82	22.24	20.14	29.27	12.14	13.68
3	395472	Transcript	0	84.26	17.45	6.33	14.67	3.68	36.47	25.23	73.18	7.57	37.13	23.88	14.21	10.24	28.63	38.19	34.08	15.90	24.87	12.03	17.74	50.58	37.24	21.67	5.62	18.77	45.94	5.72	11.55	13.87
4	ER1a	ExonRegion	0	5.08	3.66	15.60	19.36	8.87	3.88	10.69	6.72	0.79	6.92	3.89	6.26	2.23	3.12	0.11	16.46	3.81	10.71	1.03	1.26	10.24	6.09	1.89	0.00	3.93	8.08	0.89	4.95	2.12
5	E1_Ab	KnownBoundary	0	18.52	4.85	41.08	59.75	17.68	5.18	29.58	25.58	1.55	12.38	19.27	19.40	4.36	7.58	0.00	25.17	7.92	9.25	16.18	9.59	19.97	11.91	4.92	0.00	12.46	18.32	15.56	7.46	12.28
6	ER1b	ExonRegion	0	117.19	27.41	46.14	120.58	53.10	49.24	59.01	134.57	15.46	51.24	47.01	36.70	25.61	52.44	45.34	69.13	31.52	44.44	59.42	29.00	71.54	77.02	43.73	5.05	32.27	63.98	42.70	57.21	39.09
7	E1_Da	NovelBoundary	0	8.32	0.00	0.95	0.00	0.00	1.46	0.00	0.00	0.00	7.59	0.00	0.00	0.00	0.00	0.00	0.00	5.11	0.00	0.00	0.00	5.41	0.00	0.00	0.00	0.00	0.00	2.09	0.00	0.00
8	E1a_E2a	KnownJunction	0	62.82	22.10	3.99	0.00	6.63	39.33	44.23	58.97	19.61	35.59	11.29	16.17	26.97	34.54	16.54	40.47	15.26	14.64	24.28	30.76	44.52	42.30	41.96	2.87	33.76	25.19	29.27	6.47	19.31
9	E1a_E3a	KnownJunction	0	168.52	31.61	12.66	29.33	7.37	72.94	50.46	146.36	15.13	72.10	47.77	25.33	20.48	57.25	65.18	68.16	31.81	47.01	24.05	34.07	101.16	74.48	43.34	11.25	37.54	91.88	11.43	23.09	27.73
10	I1	Intron	0	2.10	1.84	0.63	1.30	1.70	2.74	1.19	0.42	0.87	2.27	1.28	1.03	0.28	1.74	0.67	2.54	1.56	0.89	3.52	1.04	3.25	0.30	0.16	0.39	0.45	0.17	0.64	0.76	0.14
11	I1_SR1	SilentIntronRegion	0	0.92	0.00	2.92	0.00	0.92	1.51	0.80	2.37	0.00	1.89	2.55	0.53	0.00	0.43	4.33	0.47	1.55	1.33	2.40	1.18	0.95	0.95	0.62	0.00	0.00	0.00	0.00	2.14	0.00
12	I1_AR1	ActiveIntronRegion	0	2.68	2.79	1.25	0.90	0.95	2.48	1.21	0.92	0.21	3.06	2.53	1.04	0.20	1.65	1.84	2.41	2.24	1.06	4.89	0.34	2.00	1.39	0.72	0.27	0.25	0.00	0.00	1.01	0.00
13	I1_SR2	SilentIntronRegion	0	2.07	1.79	0.45	1.41	1.84	2.83	1.20	0.26	1.00	2.17	1.04	1.05	0.31	1.81	0.35	2.65	1.46	0.85	3.38	1.14	3.53	0.12	0.06	0.42	0.50	0.20	0.75	0.67	0.17
14	E2_Aa	NovelBoundary	0	5.25	8.14	4.29	0.00	0.00	5.64	5.55	4.43	5.21	8.87	9.24	6.30	1.24	5.65	0.00	9.87	1.96	0.00	8.09	16.37	17.05	2.33	4.97	0.00	1.82	8.75	2.53	1.98	1.58
15	ER2a	ExonRegion	0	45.01	40.92	30.38	31.35	19.89	46.23	49.63	40.26	21.81	57.55	56.73	24.46	19.54	28.34	20.19	39.29	18.58	16.61	55.61	27.93	72.18	29.46	49.83	11.04	34.56	34.37	48.81	28.29	23.86
16	E2_Da	NovelBoundary	0	2.65	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.43	0.00	0.00	8.07	0.00	1.17	0.00	0.00	2.79	0.00	0.00	0.00	1.64	0.00	0.00	0.00	0.00	0.00	4.97	5.84	0.00
17	E2a_E3a	KnownJunction	0	22.00	13.48	59.80	29.33	33.16	55.67	28.38	44.99	13.09	40.70	32.01	22.26	10.32	25.75	0.00	23.18	14.63	4.62	56.65	40.36	92.94	23.00	16.06	5.38	16.71	12.92	38.12	8.85	9.41
18	I2_SR2	SilentIntronRegion	0	1.60	2.97	0.00	1.01	0.00	1.54	0.69	0.00	0.79	3.57	3.93	1.10	0.48	0.00	2.53	1.37	0.97	0.84	0.00	1.03	2.06	0.00	0.00	0.33	0.00	0.00	0.00	0.00	0.21
19	E3_Aa	NovelBoundary	0	0.00	17.45	1.49	0.00	0.00	9.44	0.00	0.00	0.00	5.99	7.81	1.54	0.00	2.28	0.00	0.00	2.25	4.62	0.00	0.00	1.93	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
20	ER3a	ExonRegion	0	80.07	121.95	31.76	117.73	78.31	130.71	94.65	56.87	66.67	95.72	81.84	108.41	51.96	67.67	138.33	86.17	53.58	59.22	200.76	60.46	155.99	33.13	40.35	49.85	74.87	32.25	113.22	35.51	48.69
21	ER3b	ExonRegion	0	0.00	3.28	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.17	0.00	3.09	0.00	0.00	11.20	0.00	0.00	2.73	0.00	1.41	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00