Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	WDR89	Gene	0	7.24	23.49	10.77	30.25	14.88	27.61	19.09	8.29	29.32	26.11	31.79	18.09	17.63	9.99	17.62	14.69	12.72	12.19	33.95	14.87	19.17	5.49	11.31	16.67	9.22	6.73	24.30	7.69	18.29
2	267522	Transcript	0	2.71	4.56	5.08	9.27	0.00	15.92	13.39	0.00	0.00	11.26	19.30	3.22	6.85	7.05	0.00	17.59	0.00	9.89	8.09	22.74	29.08	0.00	4.48	8.02	5.49	0.00	2.34	2.29	1.35
3	400511	Transcript	0	1.18	0.04	0.00	1.65	0.00	0.64	1.12	0.00	0.92	0.00	0.72	0.00	0.25	0.40	0.20	1.14	1.15	0.66	2.26	0.63	0.60	0.00	0.00	0.28	0.00	0.00	0.00	0.00	0.21
4	394942	Transcript	0	1.07	1.64	1.87	4.88	2.49	5.73	2.69	0.31	0.37	6.02	5.95	3.30	1.52	1.51	0.93	7.59	1.34	2.73	6.79	4.22	7.37	0.60	3.01	0.36	2.62	4.19	10.99	0.54	1.79
5	IG35_AR3	ActiveIntergenicRegion	0	1.85	3.22	0.00	1.34	0.83	0.23	2.39	1.36	0.99	1.36	0.13	0.00	0.00	1.18	1.86	0.84	1.64	1.15	4.65	0.00	1.82	0.57	0.31	2.19	0.47	0.00	0.00	1.98	0.00
6	IG35_AR2	ActiveIntergenicRegion	0	0.83	2.96	0.00	5.14	1.90	1.34	1.55	2.74	3.93	3.49	0.60	0.72	0.00	1.41	3.93	1.93	2.14	2.10	3.63	0.00	2.78	0.00	0.70	0.84	0.00	0.00	0.00	0.70	1.82
7	IG35_SR1	SilentIntergenicRegion	0	1.61	2.19	0.56	0.00	0.00	2.63	0.00	1.69	0.56	4.90	0.77	0.00	0.16	1.17	0.00	0.00	2.90	4.95	0.28	0.00	1.07	0.00	0.00	0.49	0.00	0.00	0.00	1.26	0.00
8	IG35_AR1	ActiveIntergenicRegion	0	6.92	2.58	1.70	6.53	3.48	5.21	19.08	5.99	5.51	7.09	7.70	3.69	4.10	2.81	5.90	5.24	4.78	3.45	6.83	5.04	6.79	5.56	3.87	3.56	3.11	7.28	5.73	6.97	6.41
9	ER1a	ExonRegion	0	6.10	2.74	6.95	7.51	9.46	12.01	7.53	0.86	6.52	8.80	10.63	5.05	4.89	5.68	4.52	7.31	3.97	2.68	10.09	9.28	17.99	3.42	7.33	2.64	3.00	2.94	5.11	1.96	3.57
10	E1_Da	KnownBoundary	0	3.01	0.00	0.00	0.00	0.00	0.00	5.26	0.00	6.33	0.00	1.11	0.00	1.97	0.00	7.77	0.00	5.81	4.62	0.00	0.00	5.66	0.00	0.00	3.05	0.00	0.00	0.00	0.00	1.65
11	E1a_E2b	KnownJunction	0	2.71	4.56	5.08	9.27	0.00	15.92	13.39	0.00	0.00	11.26	19.30	3.22	6.85	7.05	0.00	17.59	0.00	9.89	8.09	22.74	29.08	0.00	4.48	8.02	5.49	0.00	2.34	2.29	1.35
12	ER1b	ExonRegion	0	2.36	0.09	0.00	3.29	0.00	1.29	2.23	0.00	1.83	0.00	1.45	0.00	0.50	0.81	0.40	2.28	2.29	1.33	4.53	1.27	1.21	0.00	0.00	0.56	0.00	0.00	0.00	0.00	0.42
13	E1_Db	NovelBoundary	0	3.01	0.00	0.00	0.00	0.00	1.88	0.00	0.00	1.89	0.00	1.58	1.51	0.00	0.00	0.00	2.98	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.78	0.00	0.00	1.98	0.00
14	E1b_E3b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
15	ER2a	ExonRegion	0	2.14	3.28	2.62	9.75	4.98	10.08	5.38	0.61	0.75	7.70	9.52	4.12	3.03	3.02	1.87	15.18	1.67	5.46	13.58	8.43	14.74	1.20	6.03	0.72	5.24	2.10	21.98	1.09	3.58
16	ER2b	ExonRegion	0	22.80	31.63	14.23	23.19	26.85	63.67	37.49	16.96	13.58	52.18	78.15	28.13	27.09	25.98	14.77	28.85	18.36	17.54	50.00	40.18	76.20	16.24	21.58	22.88	21.85	17.35	54.81	12.56	30.52
17	E2_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	1.50	0.00	0.00	4.26	5.99	1.61	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.13	1.56	0.00	0.00	0.00	0.00	4.29	0.00	0.00	0.00
18	E2a_E3a	KnownJunction	0	56.27	46.15	24.59	21.14	20.78	55.56	41.54	46.98	17.57	56.28	104.84	48.76	40.73	41.61	17.54	36.41	22.76	23.89	32.37	92.13	59.72	21.98	40.04	62.63	32.20	26.61	50.54	8.27	40.54
19	I2_SR1	SilentIntronRegion	0	0.38	0.95	0.30	0.00	0.00	1.14	0.36	0.33	3.86	3.81	1.13	1.35	1.43	0.37	2.56	0.83	2.32	0.84	1.53	0.00	1.10	0.00	0.21	1.22	0.27	0.19	0.65	1.30	0.74
20	I2_AR1	ActiveIntronRegion	0	0.42	2.50	0.16	0.00	0.47	1.36	0.98	0.35	6.42	3.23	2.02	1.56	2.04	0.18	5.69	2.19	3.40	1.57	4.31	0.53	1.78	0.00	0.21	2.34	0.80	0.00	1.60	1.03	2.34
21	I2_SR2	SilentIntronRegion	0	0.52	2.32	0.97	0.00	1.76	2.46	0.24	0.67	4.06	3.78	0.35	2.00	1.44	0.33	1.69	2.51	4.47	0.52	2.31	0.33	0.88	0.65	0.55	0.57	1.20	1.13	1.10	2.74	2.69
22	I2_AR2	ActiveIntronRegion	0	0.00	1.28	1.46	0.00	0.63	2.46	0.78	0.95	3.33	3.04	1.47	0.71	1.05	0.69	2.29	0.08	1.90	0.99	1.65	0.71	2.87	0.46	0.29	1.17	0.18	0.20	0.00	2.09	0.52
23	I2_AR3	ActiveIntronRegion	0	0.00	4.82	0.94	0.00	0.00	0.05	0.00	0.00	4.34	8.13	6.43	1.20	4.89	0.91	5.60	0.00	2.67	0.00	0.00	0.00	0.67	0.00	0.00	2.15	0.00	0.00	0.00	3.37	1.43
24	E3_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	1.80	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.27	0.00	0.00
25	ER3a	ExonRegion	0	47.16	37.23	23.56	14.63	14.94	54.53	40.31	39.28	13.48	53.90	104.73	51.95	40.27	39.00	16.80	49.77	26.04	29.11	36.21	82.45	63.24	21.63	34.96	65.25	34.30	26.72	58.61	16.30	37.58
26	ER3b	ExonRegion	0	2.15	2.96	2.97	10.53	5.79	6.44	4.55	1.32	1.83	4.97	10.18	4.42	3.82	2.32	2.15	3.76	2.61	2.37	6.00	5.32	5.92	1.27	2.40	3.46	2.74	1.31	7.44	1.22	3.59
27	E3_Da	KnownBoundary	0	4.72	13.19	3.21	61.47	48.93	50.03	13.67	0.00	12.03	26.76	76.33	19.61	29.14	13.63	8.37	7.19	16.66	13.87	48.55	29.77	18.49	7.44	6.80	5.14	1.40	0.00	62.62	8.67	32.45
28	ER3c	ExonRegion	0	11.62	46.89	19.46	54.41	24.73	49.45	34.52	15.80	61.97	48.76	53.98	33.43	33.07	17.52	35.70	26.09	23.91	23.20	64.96	23.98	29.78	9.52	20.64	31.72	15.97	12.18	42.28	14.86	34.63
29	ER3d	ExonRegion	0	0.00	0.00	1.12	0.00	0.00	1.37	0.00	0.00	0.00	4.33	2.38	2.47	0.00	0.00	0.00	0.00	1.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	6.29	0.00	0.00	0.00