Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	TIMM9	Gene	0	400.80	216.10	171.31	591.31	297.86	208.58	485.35	504.75	252.69	246.25	193.14	221.33	291.62	139.27	426.03	207.31	85.83	153.39	506.38	466.83	242.92	159.43	196.27	191.49	226.04	140.10	231.61	217.05	337.71
2	216463	Transcript	0	89.08	47.60	186.81	307.10	129.57	49.95	156.05	152.77	50.24	46.29	38.73	102.76	121.22	43.24	122.18	30.48	39.01	20.94	75.30	93.91	44.88	37.86	46.23	34.73	33.64	50.48	107.99	83.17	199.19
3	395159	Transcript	0	20.07	14.24	7.84	20.32	13.86	11.74	23.41	13.32	12.24	10.77	9.59	13.22	13.46	7.16	22.44	6.04	4.32	1.81	15.03	22.81	10.73	7.57	6.13	9.63	7.48	6.21	21.60	10.18	17.35
4	407021	Transcript	0	334.38	141.25	16.83	109.69	53.14	238.73	505.28	424.68	246.80	242.07	116.23	150.49	245.51	91.91	255.76	275.01	61.44	153.74	386.20	443.15	290.98	124.39	110.91	144.84	253.94	142.49	90.36	148.33	289.01
5	ER1a	ExonRegion	1	11.26	0.00	4.16	32.58	14.18	5.38	6.80	9.73	7.37	5.46	4.60	7.29	9.05	5.77	12.89	5.41	1.62	8.17	10.16	12.89	13.01	3.37	26.55	2.27	13.97	33.73	14.29	28.02	17.48
6	E1a_E2a	KnownJunction	0	8.26	0.00	0.00	0.00	0.00	5.56	5.66	4.83	5.54	9.55	5.69	3.04	1.24	4.25	7.57	17.14	1.28	13.87	8.09	31.18	0.00	4.28	1.97	3.05	17.47	5.45	4.87	4.09	4.56
7	E1a_E3a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	3.45	0.00	2.24	2.80	5.07	0.00	1.87	1.82	2.39	0.00	0.00	0.00	4.62	0.00	0.00	3.53	0.00	4.28	3.05	3.64	0.00	2.04	0.00	6.17
8	E1a_E4b	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	2.40	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.48	1.87	0.00	5.42	0.00	0.00	0.00	0.00
9	I1	Intron	0	0.00	0.00	0.00	0.00	1.67	0.47	0.00	1.89	0.57	1.48	0.41	0.85	0.00	0.93	1.58	0.85	0.00	0.66	8.75	0.00	0.49	0.62	3.09	0.00	2.45	1.08	0.00	3.91	0.68
10	I1_SR1	SilentIntronRegion	0	0.00	0.00	0.00	0.00	1.77	0.50	0.00	2.00	0.61	1.57	0.43	0.89	0.00	0.98	1.67	0.90	0.00	0.68	9.24	0.00	0.52	0.65	3.27	0.00	2.58	1.14	0.00	4.13	0.72
11	E2_Aa	NovelBoundary	0	0.00	0.00	1.54	0.00	0.00	0.00	0.00	0.00	0.00	1.64	0.00	0.00	0.00	1.09	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.93	0.00	0.00	0.00	1.71	0.00
12	ER2a	ExonRegion	0	298.49	81.69	364.78	1299.25	606.40	156.44	412.32	379.48	175.86	180.68	135.54	221.66	270.47	94.75	263.32	229.69	90.09	122.87	261.95	269.85	217.82	153.40	214.73	80.08	164.47	208.45	234.28	279.50	408.42
13	E2_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.97	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
14	E2a_E3a	KnownJunction	0	55.62	30.05	151.46	257.11	119.67	41.25	127.99	143.23	35.69	33.87	27.08	76.26	98.91	31.15	111.82	17.52	35.27	19.14	40.46	70.71	36.50	23.43	43.64	19.98	22.73	41.76	89.60	76.97	165.07
15	E2a_E4b	NovelJunction	0	8.55	3.97	26.46	16.82	6.04	0.00	7.95	12.39	5.02	0.00	6.20	4.88	19.55	5.47	8.37	0.00	0.97	5.14	8.09	23.49	0.00	0.00	0.00	7.96	6.90	2.19	9.69	0.00	17.79
16	E2a_E5a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	1.88	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.11	0.00
17	E2_Db	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.66	0.00	0.00	0.00	0.00	1.37	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.58	0.00
18	E2b_E3a	NovelJunction	0	3.01	0.00	2.59	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.13	0.00	0.00	2.51	0.00	0.00	4.29	0.00	0.00	0.00
19	E2b_E3b	KnownJunction	0	51.49	21.81	16.37	19.63	18.57	16.80	56.18	24.19	21.56	19.45	20.50	29.55	35.09	14.36	51.23	9.41	6.46	0.00	0.00	40.77	19.85	19.35	13.30	21.35	17.01	13.39	56.06	19.90	40.44
20	ER2b	ExonRegion	0	0.43	2.63	2.24	26.33	3.99	0.82	2.42	5.52	1.35	0.87	3.09	1.73	0.26	0.91	0.00	0.00	0.00	0.00	3.62	11.80	0.57	1.44	1.45	0.00	1.14	1.57	1.10	0.98	2.95
21	E3_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	4.68	2.86	0.00	1.49	0.00	0.00	1.27	0.00	2.24	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.67	0.00	0.00	0.00	0.00
22	E3_Ab	NovelBoundary	0	2.24	0.00	0.00	10.57	0.00	0.00	0.00	2.29	5.51	0.00	0.00	0.00	0.00	1.91	0.00	0.00	0.00	0.00	0.00	3.64	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.69
23	ER3a	ExonRegion	0	122.54	65.15	222.17	357.10	139.48	58.65	184.11	162.32	64.79	58.71	50.38	129.25	143.54	55.33	132.55	43.44	42.74	22.74	110.13	117.11	53.25	52.28	48.82	49.48	44.55	59.20	126.38	89.38	233.31
24	ER3b	ExonRegion	0	684.53	174.46	69.19	358.68	138.69	283.84	553.25	720.15	312.91	243.63	149.90	214.43	320.78	153.70	342.66	241.35	81.57	158.52	419.08	670.65	313.65	345.18	117.03	240.38	270.37	140.24	123.09	156.01	326.52
25	E3_Da	NovelBoundary	0	2.42	0.00	0.00	0.00	0.00	0.00	0.00	0.00	19.43	9.07	0.00	1.14	1.24	0.97	8.37	0.00	3.67	0.00	16.18	0.00	1.76	0.00	0.00	0.00	0.00	0.00	0.00	6.47	0.00
26	E3a_E4b	KnownJunction	0	1002.28	432.98	47.74	286.87	184.95	797.12	1464.87	1384.79	947.32	722.30	296.86	458.40	792.96	273.97	918.66	835.67	189.17	371.68	1181.05	1379.84	1026.67	373.28	333.86	447.24	700.31	404.38	181.20	414.40	902.36
27	E3a_E5a	NovelJunction	0	49.19	0.00	3.96	10.57	0.00	33.57	82.73	31.10	38.37	36.99	4.65	4.64	12.55	6.12	8.37	24.17	5.60	33.78	48.55	88.16	36.34	13.66	10.93	6.94	22.62	10.47	7.16	17.03	18.49
28	E3a_E6a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.20	0.00	0.00	1.87	1.21	0.00	0.00	0.00	0.00	4.62	0.00	3.72	0.00	0.00	0.00	2.81	1.44	3.22	0.00	0.00	2.97
29	I3	Intron	0	1.14	2.34	0.44	1.46	0.40	1.54	0.78	0.79	3.22	2.21	1.07	0.74	0.66	0.74	2.10	1.30	1.59	0.98	5.22	1.25	3.70	0.15	0.33	1.32	0.55	0.42	0.67	0.97	1.27
30	I3_SR1	SilentIntronRegion	0	1.11	2.41	0.45	1.55	0.42	1.52	0.79	0.84	3.06	2.17	1.04	0.73	0.59	0.76	1.90	1.24	1.34	0.92	5.27	1.19	3.66	0.16	0.34	1.24	0.56	0.41	0.71	0.92	1.22
31	I3_AR1	ActiveIntronRegion	0	2.14	0.00	1.12	0.00	0.00	1.37	0.40	0.00	6.97	4.33	5.95	0.33	3.90	0.91	11.57	2.53	7.08	5.46	18.71	1.50	7.13	0.00	1.81	2.15	0.00	0.00	0.00	3.26	2.59
32	I3_AR2	ActiveIntronRegion	0	1.48	1.34	0.26	0.00	0.00	2.10	0.77	0.00	5.66	2.82	0.92	0.98	1.61	0.38	4.69	2.37	5.59	1.64	2.54	2.29	4.04	0.00	0.04	2.68	0.59	0.65	0.00	1.58	2.12
33	E4_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	5.18	0.00	0.00	0.00	0.00	0.00	27.11	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.90
34	E4_Ab	NovelBoundary	0	3.01	8.24	0.00	0.00	0.00	0.00	0.00	0.00	1.55	1.96	0.00	1.54	0.00	0.00	8.37	3.82	1.89	0.00	8.09	0.00	6.06	2.19	0.00	0.00	0.00	2.06	0.00	0.00	0.00
35	ER4a	ExonRegion	0	334.38	141.25	16.83	109.69	53.14	238.73	505.28	424.68	246.80	242.07	116.23	150.49	245.51	91.91	255.76	275.01	61.44	153.74	386.20	443.15	290.98	124.39	110.91	144.84	253.94	142.49	90.36	148.33	289.01
36	ER4b	ExonRegion	0	596.52	381.61	76.84	289.65	148.28	497.29	1361.70	684.13	520.49	661.79	547.97	583.15	780.99	274.88	879.56	648.78	215.43	371.89	1086.06	958.66	576.10	220.64	477.13	350.17	591.79	428.56	451.13	592.09	1017.93
37	E4_Da	NovelBoundary	0	3.01	0.00	0.00	0.00	0.00	1.92	0.00	0.00	10.05	2.00	3.61	0.00	0.00	0.00	0.00	3.82	8.06	0.00	24.05	0.00	7.90	0.00	0.00	5.68	1.93	0.00	0.00	0.00	1.72
38	E4a_E5a	KnownJunction	0	427.05	324.40	102.75	408.31	211.63	328.00	747.28	404.75	333.27	457.26	504.22	564.84	634.63	243.63	813.22	295.29	209.65	240.42	881.63	889.51	361.27	172.45	488.02	316.30	316.87	409.62	779.65	670.92	913.58
39	E4a_E6a	NovelJunction	0	4.72	9.31	0.00	0.00	0.00	0.00	2.29	12.04	0.00	3.71	1.20	3.67	9.36	0.00	25.91	10.63	1.40	0.00	8.09	15.96	3.89	1.99	6.80	2.81	6.97	4.38	12.67	5.48	18.39
40	E5_Aa	NovelBoundary	0	0.00	4.85	1.22	0.00	0.00	1.53	0.00	0.00	6.15	0.00	4.84	3.10	0.00	0.84	9.97	0.00	0.92	0.00	16.18	3.80	5.90	0.00	0.00	0.00	0.00	0.00	0.00	4.58	1.98
41	ER5a	ExonRegion	0	669.12	328.29	514.82	994.06	722.22	352.98	829.19	743.64	460.27	448.29	365.90	442.42	564.62	257.81	733.27	302.34	165.55	254.84	826.39	944.62	391.16	219.13	375.10	369.44	433.21	237.45	702.64	501.34	671.24
42	E5_Da	NovelBoundary	0	2.95	12.80	3.11	0.00	6.78	5.37	0.00	4.83	1.37	3.20	0.00	3.86	5.29	3.06	25.71	7.65	1.94	0.00	24.28	15.13	6.82	0.00	2.36	16.33	1.48	4.12	20.28	2.29	2.05
43	E5a_E6a	KnownJunction	0	726.58	399.82	565.82	1387.55	658.16	358.97	1163.12	818.20	413.03	517.57	425.61	428.55	573.48	265.79	833.95	310.20	116.44	200.86	898.04	842.21	372.10	252.86	338.54	343.52	364.49	208.22	496.58	393.20	559.97
44	I5	Intron	0	6.87	10.00	1.67	15.83	8.35	6.07	7.47	6.69	10.34	7.92	1.86	5.53	3.23	4.70	9.42	7.48	5.74	6.17	14.79	9.19	10.26	2.18	1.55	6.59	4.99	2.35	9.00	4.53	2.10
45	I5_AR1	ActiveIntronRegion	0	7.93	10.12	2.06	21.25	6.03	5.25	7.22	9.55	10.56	7.31	2.65	4.56	3.04	6.32	8.84	8.34	6.61	5.47	9.86	10.50	11.94	2.86	2.01	7.17	6.00	2.50	11.76	5.41	1.65
46	I5_AR2	ActiveIntronRegion	0	1.07	0.00	0.00	0.00	0.00	1.37	0.00	0.00	3.93	0.00	0.00	0.00	0.00	6.80	0.00	5.06	4.01	0.00	0.00	0.00	5.71	6.31	0.00	0.00	0.00	4.71	0.00	4.08	0.00
47	I5_SR1	SilentIntronRegion	0	5.42	10.28	1.21	9.04	12.29	7.30	8.36	2.89	10.41	9.14	0.86	7.15	3.60	2.56	10.81	6.47	4.81	7.49	22.73	7.79	8.30	1.30	0.98	6.15	3.86	2.27	5.30	3.43	2.88
48	E6_Aa	NovelBoundary	0	0.00	8.14	0.00	20.71	6.04	8.44	5.61	11.10	19.70	17.06	2.75	4.43	5.70	9.66	24.32	21.80	7.27	0.00	48.55	10.50	12.03	2.38	0.00	18.84	5.15	5.49	7.01	2.25	2.94
49	I5_AR3	ActiveIntronRegion	0	7.14	4.82	0.00	0.00	0.66	7.15	0.00	1.84	5.77	4.33	0.00	3.38	2.60	0.79	2.24	4.39	0.53	2.73	5.73	2.81	3.52	0.00	0.00	1.00	0.00	0.00	5.74	1.85	0.27
50	ER6a	ExonRegion	0	538.78	346.51	156.91	650.98	308.31	263.18	594.92	727.44	335.25	314.80	251.04	255.73	342.61	189.30	617.20	233.34	99.72	200.42	748.27	610.73	301.38	201.54	237.15	276.58	279.78	130.29	257.23	216.62	348.36
51	E6_Da	KnownBoundary	0	14.75	36.94	9.07	46.81	34.48	21.22	35.42	10.05	29.14	17.22	7.72	22.95	16.81	9.53	54.41	10.33	10.11	9.25	97.11	44.16	30.56	1.94	13.64	13.28	7.12	0.00	7.45	13.88	21.10
52	ER6b	ExonRegion	0	8.27	18.29	4.90	15.00	19.04	17.58	11.63	10.26	13.82	11.99	5.18	8.38	5.04	6.20	16.09	8.72	6.50	5.44	41.48	15.86	11.77	1.93	3.65	7.52	4.29	3.68	7.64	9.66	8.65