Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	PIGH	Gene	0	115.94	73.30	46.92	161.19	114.15	97.76	175.52	172.47	90.83	122.79	83.49	87.59	95.17	84.78	166.60	102.01	137.88	96.30	151.71	211.00	121.12	118.48	64.71	108.27	71.89	48.49	104.58	107.60	117.64
2	216452	Transcript	0	150.82	73.14	53.82	146.36	105.88	105.98	204.09	229.82	69.88	133.06	91.59	103.85	106.87	95.20	159.54	119.46	154.01	110.76	166.45	225.80	131.15	157.58	86.48	108.28	87.75	71.71	99.70	145.34	148.21
3	IG15_SR2	SilentIntergenicRegion	0	0.54	0.00	0.00	0.00	0.00	0.00	1.08	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.15	1.32	1.03	1.72	3.67	1.46	0.00	0.00	0.00	0.00	1.65	0.00	2.08	0.61
4	IG15_AR1	ActiveIntergenicRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.89	0.00	0.00	0.00	0.00	0.00	0.00	1.63	0.00
5	ER1a	ExonRegion	0	67.00	22.69	21.86	90.68	75.60	41.22	107.37	76.31	25.98	44.06	18.78	29.21	43.56	24.71	60.39	48.71	70.51	55.57	33.94	81.04	73.90	84.66	35.21	29.19	24.01	51.55	24.74	93.70	78.25
6	E1_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	5.72	0.00	0.00	1.52	0.00	1.66	0.00	0.93	0.00	0.00	0.00	5.39	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
7	E1a_E2a	KnownJunction	0	145.93	60.01	16.87	38.18	31.54	114.11	287.68	197.67	52.01	142.61	84.84	100.12	113.84	65.32	166.03	120.33	208.10	119.05	145.66	201.70	141.39	98.60	111.21	45.64	58.31	134.84	92.98	247.98	218.85
8	E1a_E3a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.37	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
9	I1	Intron	0	1.16	1.54	0.68	1.20	0.45	2.02	1.50	0.96	2.45	3.52	0.58	0.84	0.72	1.64	5.51	2.50	6.58	2.90	2.08	1.43	2.55	0.40	0.13	2.12	1.44	1.14	0.99	1.36	1.25
10	I1_AR2	ActiveIntronRegion	0	4.53	0.00	1.00	0.00	0.00	0.00	3.54	0.00	0.62	2.44	0.00	0.00	0.00	3.31	9.71	0.17	6.99	7.46	5.83	3.37	0.00	0.00	0.00	1.24	1.43	0.00	0.00	1.52	0.00
11	I1_SR1	SilentIntronRegion	0	1.82	0.95	0.42	0.00	0.57	3.61	1.66	1.08	2.42	4.66	0.84	0.82	1.52	2.01	6.19	3.26	6.63	3.66	2.45	1.79	2.43	0.53	0.21	1.77	1.14	1.00	1.29	1.62	1.41
12	I1_AR3	ActiveIntronRegion	0	1.58	3.29	1.52	1.05	0.00	3.80	3.01	0.81	4.96	4.18	0.87	1.77	0.32	3.22	4.89	3.19	13.45	1.75	3.86	1.05	5.08	0.53	0.27	1.82	2.22	0.96	0.54	1.93	3.23
13	I1_AR4	ActiveIntronRegion	0	0.00	0.06	2.12	0.00	3.10	2.20	9.13	0.00	4.85	2.42	1.15	2.80	0.37	4.67	8.03	8.59	14.18	3.45	0.00	2.39	4.95	0.00	0.00	3.49	1.54	1.48	0.00	4.64	3.98
14	I1_AR5	ActiveIntronRegion	0	0.00	0.00	1.12	0.56	4.98	1.37	2.64	0.00	4.67	0.00	0.00	1.24	0.00	5.37	11.20	8.57	5.47	0.84	0.00	0.86	0.11	0.00	0.97	0.00	2.53	0.00	0.00	0.00	2.68
15	E2_Aa	NovelBoundary	0	2.60	0.00	2.87	0.00	6.48	1.65	2.92	6.92	5.51	0.00	0.00	0.00	0.00	3.12	9.97	2.91	10.13	4.62	0.00	4.13	8.06	0.00	0.00	5.50	1.67	1.59	0.00	2.11	0.00
16	I1_AR6	ActiveIntronRegion	0	0.00	0.00	0.00	0.00	0.00	1.37	0.00	1.84	1.12	2.89	0.00	0.00	0.00	0.45	5.60	0.00	2.00	0.00	0.00	0.00	1.43	0.30	0.00	0.00	1.43	0.00	0.00	0.00	0.00
17	I1_SR3	SilentIntronRegion	0	0.00	0.00	0.00	0.00	0.00	0.26	0.00	1.50	0.84	1.08	0.00	0.00	0.00	0.00	3.15	0.00	1.82	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
18	ER2a	ExonRegion	0	155.82	68.78	76.58	224.22	180.17	103.79	213.13	235.33	64.35	139.85	100.47	109.12	112.02	116.31	160.87	107.68	175.02	121.64	161.27	276.54	138.59	157.53	88.20	138.18	99.87	68.60	129.38	148.44	138.87
19	E2_Da	NovelBoundary	0	28.61	25.40	3.36	63.84	54.53	7.60	50.41	7.37	22.26	18.22	5.35	4.58	1.97	14.31	63.78	34.88	87.09	23.89	64.74	33.08	23.95	1.94	0.00	13.64	9.24	2.19	10.04	14.47	9.47
20	E2a_E3a	KnownJunction	0	143.81	70.10	82.54	162.85	191.44	142.27	223.14	313.03	70.77	143.72	105.09	121.35	117.66	138.57	195.33	186.35	154.95	107.11	169.72	281.26	174.36	207.16	81.02	152.47	118.62	47.55	111.82	107.30	145.52
21	E2a_E4a	NovelJunction	0	0.00	0.00	1.37	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.36	1.30	0.00	2.02	0.00	0.00	2.41	0.00	0.00	0.00	1.76	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.52
22	I2	Intron	1	11.08	17.59	2.50	8.78	3.32	7.67	17.00	15.02	6.33	11.98	3.24	1.01	1.06	7.63	16.52	10.72	18.27	13.36	25.63	17.58	7.95	0.98	0.74	9.95	3.69	1.50	3.49	7.98	2.55
23	I2_AR1	ActiveIntronRegion	0	14.76	26.64	3.41	10.97	4.98	11.92	20.05	13.15	8.15	16.20	3.96	1.42	1.98	9.92	19.49	14.59	30.45	17.69	38.29	27.43	9.82	1.84	0.46	10.97	4.74	1.20	4.67	9.56	3.42
24	I2_SR1	SilentIntronRegion	0	9.18	9.68	1.95	8.37	0.27	3.30	16.83	18.44	4.97	7.77	3.24	0.72	0.00	5.59	15.90	3.94	5.81	9.25	13.20	6.87	6.42	0.00	1.41	9.74	3.34	2.45	1.01	8.25	1.68
25	I2_AR3	ActiveIntronRegion	0	0.00	0.00	0.00	0.00	4.98	1.37	3.75	13.70	2.19	5.44	0.00	0.00	0.00	3.40	4.95	13.65	0.00	6.03	5.26	4.84	4.11	0.00	0.00	6.05	0.00	0.00	5.49	0.00	1.25
26	E3_Aa	NovelBoundary	1	15.99	4.17	9.62	27.18	12.82	28.39	38.05	18.11	15.38	12.26	5.95	7.56	0.00	14.65	0.00	9.72	47.97	23.37	16.18	29.69	9.06	2.14	0.00	8.13	10.53	6.05	2.53	6.16	2.97
27	ER3a	ExonRegion	0	193.73	104.06	75.46	173.07	119.91	116.72	217.89	312.22	82.55	159.79	123.73	134.16	137.65	122.46	161.28	151.12	175.25	131.13	196.98	274.17	145.20	210.28	109.74	131.55	136.54	75.83	116.30	147.96	160.53
28	E3_Da	NovelBoundary	0	8.32	4.46	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.04	0.00	1.14	0.00	3.37	8.37	0.00	4.88	0.00	8.09	19.52	5.09	0.00	0.00	3.05	1.44	0.00	0.00	5.26	0.00
29	E3a_E4a	KnownJunction	0	235.06	98.79	58.45	168.24	32.57	111.23	195.33	299.74	74.70	161.18	112.05	136.50	119.86	106.37	170.42	109.16	147.41	141.02	274.92	235.36	115.00	233.90	115.93	136.92	102.78	83.60	99.74	173.75	174.54
30	I3_SR1	SilentIntronRegion	0	1.82	5.47	0.47	4.06	0.00	1.17	1.14	2.09	0.95	1.23	0.67	0.35	0.00	1.92	2.61	2.11	5.50	2.18	1.81	7.59	0.40	0.51	0.00	1.22	0.40	0.00	0.00	1.85	0.57
31	I3_SR2	SilentIntronRegion	0	5.24	2.09	0.29	6.31	1.89	3.22	2.88	3.86	1.21	1.01	1.66	0.22	0.00	1.85	2.40	4.33	4.94	1.40	5.02	9.01	5.98	2.20	0.00	3.01	0.00	1.49	0.32	1.79	3.47
32	I3_AR2	ActiveIntronRegion	0	1.20	5.41	0.00	0.00	2.13	1.21	4.32	0.00	1.44	1.62	0.00	1.73	0.00	1.16	3.14	1.39	5.06	1.08	3.58	16.59	3.20	1.01	0.00	3.62	0.80	1.38	0.00	2.47	4.23
33	I3_SR3	SilentIntronRegion	0	2.35	0.32	0.92	0.00	0.68	1.14	1.39	4.07	0.62	1.80	0.16	0.84	0.54	2.25	5.98	1.37	4.71	1.95	1.77	2.45	1.97	1.00	0.00	2.68	0.99	0.22	0.00	5.18	0.92
34	E4_Aa	NovelBoundary	0	4.48	0.00	3.09	0.00	0.00	0.00	2.40	4.73	0.00	3.52	0.00	0.00	0.00	0.00	26.11	10.56	2.09	0.00	0.00	0.00	0.00	0.00	0.00	2.27	3.86	0.00	0.00	0.00	0.00
35	ER4a	ExonRegion	0	114.37	87.59	44.97	167.31	109.92	112.53	184.08	174.42	118.77	140.23	96.16	96.51	103.47	92.68	202.43	112.90	146.79	99.81	182.64	230.52	129.64	110.94	64.07	124.04	74.15	40.00	122.94	98.23	120.92