Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	RDH11	Gene	0	281.87	318.89	132.61	331.70	214.20	271.33	211.94	230.82	209.52	201.84	219.33	178.73	241.30	261.33	270.66	161.98	249.83	162.04	202.26	211.70	231.97	244.59	206.60	267.59	194.95	121.33	247.73	206.16	202.47
2	381346	Transcript	0	347.59	258.70	164.50	409.34	231.81	255.04	233.60	312.04	162.36	220.99	217.66	203.39	228.17	301.62	225.18	182.59	280.87	183.86	163.67	204.79	224.13	301.40	249.66	216.68	207.39	165.88	222.94	245.94	210.70
3	428130	Transcript	0	0.00	4.17	2.19	0.00	5.75	3.57	2.40	1.84	3.05	7.79	3.20	3.40	2.55	1.09	0.00	7.50	9.21	0.00	0.00	3.14	5.86	7.29	2.46	0.00	1.86	4.29	17.69	0.00	3.14
4	ER1a	ExonRegion	0	130.35	46.06	64.23	425.10	251.76	74.84	112.33	98.67	32.42	113.01	89.65	100.84	112.20	87.65	66.53	120.72	156.98	110.16	35.46	67.21	73.50	104.76	178.50	48.29	61.93	144.05	138.33	134.67	137.18
5	E1_Ab	KnownBoundary	0	325.78	164.82	223.44	1016.56	440.79	238.88	329.39	246.29	116.45	284.09	193.00	275.09	339.87	247.53	223.84	305.08	514.72	227.58	145.44	230.98	216.11	239.39	510.62	134.88	164.76	370.05	247.39	452.82	452.45
6	ER1b	ExonRegion	1	127.96	92.74	147.50	399.69	188.48	131.44	136.21	101.26	58.73	120.92	91.39	146.27	177.09	133.67	100.43	89.68	245.56	86.29	70.55	119.74	99.22	102.39	188.38	64.27	89.19	160.54	134.50	254.58	260.51
7	E1a_E2a	KnownJunction	0	44.59	25.01	17.39	19.63	0.00	46.62	26.32	49.47	8.16	19.93	25.28	18.70	49.68	38.29	0.00	7.19	35.38	43.15	16.18	37.79	32.25	45.07	20.19	37.68	27.47	8.33	7.50	43.63	26.71
8	E1a_E3a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.00	0.00	0.00	0.00	0.00	0.00	0.00	1.72	2.48	0.00	0.00	0.00	0.00	0.00	0.00	0.00
9	E1a_E5a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.24	0.00	0.00	0.00	0.00	0.00	0.00	0.00
10	E1a_E6a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.05	0.00	0.00	0.00	0.00	0.00
11	I1	Intron	0	2.03	1.79	0.67	1.02	0.46	2.02	0.52	1.13	1.37	1.95	0.56	0.55	0.21	1.79	1.39	2.66	3.21	1.66	2.49	0.33	2.03	0.38	0.43	0.87	1.25	0.45	0.09	4.09	0.66
12	I1_AR1	ActiveIntronRegion	0	4.39	1.80	0.00	1.00	0.00	1.30	1.13	0.88	1.10	1.42	0.50	0.74	0.00	1.46	0.00	5.31	1.90	3.55	1.23	0.00	0.80	0.00	0.25	0.00	0.76	0.66	0.00	3.78	0.00
13	I1_SR1	SilentIntronRegion	0	1.47	2.11	0.90	0.81	0.33	2.40	0.42	1.40	1.20	2.01	0.56	0.61	0.26	1.78	1.82	2.01	3.43	1.09	2.61	0.37	1.90	0.36	0.49	1.16	1.02	0.35	0.00	4.15	0.75
14	I1_AR2	ActiveIntronRegion	0	0.00	0.00	0.00	7.31	0.00	6.19	2.02	0.00	4.83	2.31	0.00	0.00	0.00	2.72	0.00	0.00	2.80	1.91	0.00	0.00	2.71	1.26	0.00	0.00	2.86	1.57	0.00	4.73	2.01
15	I1_AR3	ActiveIntronRegion	0	0.00	0.00	0.00	7.31	0.00	2.75	2.02	0.00	4.49	2.89	0.00	0.00	0.00	2.15	0.00	0.00	2.00	0.00	7.92	0.00	5.53	1.80	0.00	0.00	5.72	0.79	0.00	3.26	0.17
16	I1_AR4	ActiveIntronRegion	0	3.70	0.00	0.00	1.26	0.00	0.00	0.97	0.00	3.80	3.14	0.00	0.00	0.00	3.16	0.00	5.85	3.21	3.01	6.24	0.00	5.02	2.55	0.00	0.00	5.52	0.00	0.00	2.42	1.67
17	I1_AR5	ActiveIntronRegion	0	3.78	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.61	5.02	0.00	0.00	0.00	3.33	0.00	7.23	2.29	3.64	0.00	0.00	3.53	1.80	0.00	1.13	0.00	0.00	0.00	3.03	2.68
18	I1_AR6	ActiveIntronRegion	0	0.58	0.00	0.09	0.00	0.00	0.00	0.00	0.00	3.50	4.00	1.37	0.00	0.00	1.54	0.00	2.92	3.78	0.94	2.61	0.00	4.22	0.90	0.00	2.15	0.93	0.18	0.00	2.63	2.68
19	I1_AR7	ActiveIntronRegion	0	1.98	0.00	0.49	2.20	3.00	0.84	0.00	0.00	2.14	1.46	0.86	0.00	0.40	2.17	1.42	2.06	4.30	2.47	3.49	0.85	4.41	0.55	0.56	0.16	3.36	0.93	1.13	5.06	0.54
20	E2_Aa	NovelBoundary	0	2.24	0.00	0.00	17.04	0.00	0.00	4.92	0.00	2.80	3.99	1.58	1.36	0.00	4.21	0.00	0.00	7.90	4.62	0.00	0.00	0.00	4.72	1.97	0.00	3.26	0.00	0.00	1.71	2.91
21	ER2a	ExonRegion	0	257.16	132.03	23.47	75.40	39.06	182.43	151.16	222.46	73.92	152.80	106.27	120.86	165.83	206.70	111.92	152.35	184.12	158.82	79.41	206.55	163.18	229.58	150.31	152.03	139.19	81.39	70.80	116.62	130.84
22	E2_Da	NovelBoundary	0	8.55	24.53	2.32	0.00	0.00	19.41	16.65	2.54	25.18	1.72	12.78	6.42	0.00	19.87	17.74	36.87	47.49	28.13	0.00	0.00	5.09	2.48	0.00	5.26	5.80	12.62	2.19	9.53	8.65
23	E2a_E3a	KnownJunction	0	246.32	210.38	33.39	156.38	29.47	291.56	353.30	217.23	113.71	337.94	261.18	268.43	324.56	266.83	235.99	231.56	388.51	262.90	234.68	262.74	244.47	148.77	417.74	195.90	175.90	311.17	223.19	341.57	448.19
24	E2a_E4a	NovelJunction	1	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.72	0.00	1.87	0.00	0.00	0.00	0.00	0.00	4.62	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	18.60	0.00
25	I2	Intron	0	10.93	12.29	3.01	23.66	6.59	12.17	5.13	4.69	5.63	9.10	4.46	5.37	0.29	11.80	8.01	15.38	10.97	11.41	12.46	4.20	7.70	0.81	1.63	5.16	5.14	1.65	1.92	7.33	1.60
26	I2_AR1	ActiveIntronRegion	0	11.00	12.36	3.02	23.80	6.63	12.24	5.16	4.72	5.66	9.15	4.49	5.40	0.29	11.86	8.05	15.46	11.04	11.48	12.53	4.22	7.75	0.82	1.64	5.19	5.17	1.66	1.93	7.37	1.61
27	E3_Aa	NovelBoundary	0	21.59	21.72	2.52	0.00	7.37	19.49	16.19	4.43	5.06	13.02	7.05	7.89	0.00	20.21	0.00	25.86	35.97	9.25	8.09	13.89	13.12	1.99	1.87	17.29	7.05	1.76	0.00	18.69	0.00
28	ER3a	ExonRegion	0	336.29	189.62	198.52	372.43	276.51	241.78	201.61	282.57	105.48	241.81	250.21	198.47	223.43	324.36	160.77	149.56	283.40	191.50	161.77	253.72	173.14	276.58	302.28	241.62	227.65	229.16	295.12	310.31	261.22
29	E3_Da	NovelBoundary	0	8.67	0.00	4.86	0.00	0.00	12.78	0.00	1.99	1.19	3.87	0.00	6.45	0.00	6.65	22.12	3.29	11.30	13.87	0.00	0.00	8.74	2.43	0.00	0.00	1.59	0.00	0.00	12.13	3.37
30	E3a_E4a	KnownJunction	0	480.38	198.17	243.00	687.41	385.23	258.06	219.36	359.41	111.27	196.65	206.07	190.30	162.57	358.03	189.35	152.84	252.08	149.11	121.39	259.84	183.50	339.88	234.97	262.11	242.84	99.86	147.95	172.31	123.01
31	I3	Intron	0	6.10	1.83	0.38	4.90	2.22	6.42	1.38	3.56	3.83	4.93	1.49	1.61	1.18	8.13	5.43	9.21	15.29	8.70	6.18	2.42	4.22	1.23	0.41	6.37	4.56	0.18	1.88	3.53	1.60
32	I3_AR1	ActiveIntronRegion	0	6.13	1.84	0.38	4.92	2.23	6.44	1.38	3.57	3.84	4.95	1.50	1.62	1.19	8.17	5.45	9.25	15.36	8.74	6.21	2.43	4.24	1.24	0.41	6.40	4.58	0.18	1.88	3.54	1.61
33	E4_Aa	NovelBoundary	0	8.26	0.00	3.51	0.00	6.93	9.05	2.75	2.29	12.73	11.14	0.00	1.45	0.00	7.62	8.37	0.00	16.70	13.87	32.37	11.25	0.00	2.14	0.00	5.68	3.30	0.00	0.00	2.29	0.00
34	ER4a	ExonRegion	0	439.37	247.84	174.84	486.88	260.99	272.36	218.53	365.29	135.81	256.74	244.92	240.56	216.64	413.78	193.51	196.12	332.76	220.91	196.25	244.39	202.48	377.01	256.02	276.25	261.76	187.59	236.58	284.85	210.68
35	E4_Da	NovelBoundary	0	8.26	0.00	0.00	0.00	0.00	1.96	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.33	0.00	0.00	3.26	4.62	0.00	0.00	2.01	2.19	0.00	0.00	1.44	0.00	0.00	0.00	0.00
36	E4a_E5a	KnownJunction	0	445.75	270.78	145.63	415.64	178.91	300.42	255.41	417.73	170.47	228.29	260.07	239.18	260.49	409.08	243.97	215.04	345.09	245.69	202.31	294.57	240.54	345.57	285.94	243.15	252.05	177.36	217.28	260.02	283.02
37	E4a_E6a	KnownJunction	0	0.00	4.17	2.19	0.00	5.75	3.57	2.40	1.84	3.05	7.79	3.20	3.40	2.55	1.09	0.00	7.50	9.21	0.00	0.00	3.14	5.86	7.29	2.46	0.00	1.86	4.29	17.69	0.00	3.14
38	E4a_E7a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	5.80	0.00	0.00	0.00	0.00
39	I4	Intron	0	4.78	2.48	0.72	2.46	0.84	1.65	0.86	2.21	1.10	2.23	0.51	1.11	1.00	3.02	1.26	1.70	6.40	3.33	2.46	2.13	2.20	1.08	0.15	2.40	1.72	1.62	0.00	1.82	3.61
40	I4_AR1	ActiveIntronRegion	0	4.79	2.49	0.72	2.47	0.84	1.65	0.87	2.21	1.11	2.23	0.51	1.11	1.00	3.03	1.27	1.71	6.42	3.34	2.47	2.13	2.21	1.09	0.16	2.41	1.72	1.62	0.00	1.82	3.62
41	E5_Aa	NovelBoundary	0	2.42	19.00	2.04	0.00	0.00	6.52	0.00	0.00	1.28	2.04	0.00	1.42	0.00	1.86	0.00	0.00	8.58	9.25	0.00	4.05	1.89	2.48	0.00	2.33	3.56	0.00	0.00	4.18	0.00
42	ER5a	ExonRegion	0	482.55	275.49	217.10	358.08	203.27	316.74	269.38	420.13	169.90	286.07	281.25	273.95	262.66	403.69	234.75	206.10	354.77	220.10	185.67	254.91	265.18	436.74	339.33	244.08	295.16	220.42	254.74	321.40	246.10
43	E5_Da	NovelBoundary	0	0.00	0.00	2.39	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.61	1.75	0.00	1.04	0.00	0.00	1.26	0.00	15.96	0.00	0.00	2.48	0.00	0.00	1.82	0.00	0.00	3.82	0.00
44	E5a_E6a	KnownJunction	0	451.71	307.14	293.52	545.27	312.43	284.92	319.60	455.46	170.99	286.81	231.60	240.99	253.64	378.63	246.36	218.10	318.42	197.78	153.53	200.46	282.58	426.03	282.74	245.54	249.36	203.76	235.81	343.77	190.16
45	E5a_E7a	NovelJunction	0	2.89	8.82	0.00	10.78	7.37	0.00	2.63	12.89	0.00	0.00	0.00	0.00	0.00	1.75	8.37	0.00	1.26	4.62	0.00	0.00	1.68	4.47	0.00	0.00	0.00	0.00	3.68	0.00	1.32
46	I5_SR2	SilentIntronRegion	0	1.76	1.32	0.34	0.00	0.00	0.56	0.00	0.74	0.80	0.30	1.46	0.38	0.27	1.39	1.89	1.52	0.31	3.16	0.65	1.13	1.46	0.74	0.00	0.00	0.59	0.00	0.00	1.67	0.41
47	E6_Aa	NovelBoundary	0	2.42	4.85	1.54	0.00	0.00	5.72	0.00	0.00	0.00	1.48	0.00	1.36	1.40	1.06	0.00	3.21	1.10	0.00	0.00	3.56	0.00	4.57	0.00	0.00	0.00	0.00	0.00	0.00	1.75
48	ER6a	ExonRegion	0	436.90	285.13	255.64	490.79	240.16	264.19	253.42	429.51	160.03	242.20	258.01	226.45	294.58	362.37	230.95	214.45	291.72	213.48	180.79	261.54	236.74	397.64	326.17	281.03	269.28	184.37	255.95	288.93	213.91
49	E6_Da	NovelBoundary	0	0.00	0.00	1.10	0.00	0.00	1.96	2.92	0.00	3.11	0.00	0.00	0.00	1.40	8.82	23.32	0.00	4.64	9.25	8.09	3.14	9.75	0.00	0.00	2.45	5.00	0.00	2.53	0.00	3.80
50	E6a_E7a	KnownJunction	0	412.07	327.69	235.40	349.64	265.56	283.04	324.18	442.47	227.02	284.97	231.66	240.60	306.18	363.06	263.10	249.46	274.48	226.68	169.94	289.45	243.43	397.79	292.59	337.48	275.77	164.32	232.73	357.61	209.80
51	I6_SR1	SilentIntronRegion	0	6.51	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.32	6.14	0.72	0.00	0.00	3.56	3.33	1.51	2.72	2.34	1.94	0.00	0.00	1.09	0.00	3.87	2.60	0.95	0.00	1.98	0.00
52	I6_AR5	ActiveIntronRegion	0	1.53	1.81	0.80	2.99	0.29	2.62	1.20	0.33	2.90	3.27	1.91	1.39	0.62	3.15	6.31	1.92	5.16	2.20	4.38	0.45	3.06	0.43	0.22	2.56	1.28	0.56	1.09	2.53	0.80
53	I6_SR3	SilentIntronRegion	0	0.95	1.43	0.00	0.00	0.00	3.05	0.00	0.82	1.00	2.56	0.00	0.00	0.86	0.60	0.00	2.20	1.32	2.56	5.67	0.00	0.63	0.00	0.00	0.00	3.17	0.00	0.00	0.00	0.00
54	I6_AR7	ActiveIntronRegion	0	0.00	4.83	1.13	0.00	0.82	1.63	0.00	0.00	0.94	2.19	2.01	0.84	0.44	1.30	6.68	2.09	4.29	2.60	4.32	0.00	3.61	0.00	0.31	0.36	2.41	2.92	0.93	3.03	0.68
55	E7_Aa	NovelBoundary	0	8.20	0.00	0.00	0.00	13.85	1.96	0.00	0.00	10.90	5.07	0.00	1.36	0.00	5.81	0.00	2.91	15.08	0.00	0.00	0.00	3.17	2.48	0.00	2.63	5.68	0.00	0.00	4.22	1.55
56	ER7a	ExonRegion	0	409.22	252.41	213.91	356.39	254.81	216.54	248.13	396.51	175.44	194.46	191.26	207.48	242.95	313.57	212.61	189.45	287.92	188.72	152.38	205.55	194.31	370.31	279.85	281.39	234.36	121.70	233.64	245.37	174.82
57	E7_Da	KnownBoundary	0	399.74	187.31	228.47	565.11	369.31	233.66	264.22	427.44	212.35	181.59	217.01	210.69	225.14	310.88	381.10	162.71	310.52	174.02	193.99	251.65	164.81	292.82	271.32	311.52	270.39	143.50	267.77	265.37	229.81
58	ER7b	ExonRegion	0	227.59	394.04	102.01	302.64	212.69	298.29	211.26	168.22	268.02	190.77	225.75	161.99	251.88	229.06	334.31	152.98	229.09	145.58	241.38	206.81	258.83	193.89	161.76	302.35	178.44	83.82	268.54	169.85	197.06
59	IG17_AR2	ActiveIntergenicRegion	0	0.00	0.00	0.00	0.00	0.00	0.50	0.00	0.00	2.25	0.00	0.00	0.00	0.00	0.00	0.51	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.17	0.00	0.00	0.00	0.00