Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	AL354696.6	Gene	0	3.89	4.31	4.11	6.51	5.48	4.88	12.54	26.94	8.63	4.66	5.18	13.90	5.01	3.45	4.40	4.46	5.54	5.68	8.02	6.25	8.30	4.91	12.02	3.27	4.88	3.73	10.81	5.74	15.09
2	499512	Transcript	0	8.68	6.51	8.47	13.99	7.98	8.41	34.41	76.99	17.48	10.23	7.44	31.12	12.93	5.41	6.25	7.28	10.79	7.43	16.11	15.61	12.75	11.11	24.46	5.24	11.80	8.45	17.48	14.00	41.36
3	ER1a	ExonRegion	0	16.73	8.90	18.69	43.38	44.49	15.98	72.91	113.56	25.22	17.41	14.56	59.44	19.23	9.13	11.11	17.56	25.83	24.05	37.72	30.44	21.66	22.80	66.50	7.50	15.72	15.46	46.87	28.18	74.83
4	E1_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.97	0.00	0.00	0.00	0.00	0.00	1.17	0.00	0.00	7.86	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.99
5	E1a_E2a	KnownJunction	0	5.25	4.65	24.32	30.20	0.00	13.74	48.69	31.65	20.40	14.90	4.46	37.80	26.69	1.37	16.34	3.14	13.48	0.00	24.28	3.72	15.12	0.00	33.39	0.00	14.21	21.07	17.15	30.87	76.49
6	E1a_E3a	NovelJunction	0	0.00	0.00	0.00	0.00	6.48	0.00	0.00	6.72	0.00	0.00	0.00	4.73	0.00	0.00	0.00	0.00	2.07	4.62	0.00	0.00	0.00	0.00	2.46	0.00	0.00	0.00	0.00	0.00	1.55
7	E2_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	9.97	0.00	0.00	0.00	8.09	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
8	ER2a	ExonRegion	0	9.74	4.50	8.80	17.79	3.38	4.45	21.38	88.64	14.36	6.35	2.01	19.24	9.85	4.69	5.46	4.78	5.79	10.98	4.97	20.09	8.66	18.61	5.58	4.30	10.43	2.64	5.16	5.09	28.58
9	E2_Da	NovelBoundary	0	3.01	0.00	0.00	8.63	6.63	1.84	4.98	2.19	1.49	0.00	0.00	1.17	0.00	5.10	0.00	0.00	4.95	9.25	40.46	23.57	1.48	6.17	2.17	3.05	1.59	1.63	0.00	0.00	3.90
10	E2a_E3a	KnownJunction	1	16.28	14.54	0.00	0.00	0.00	1.96	37.93	180.80	26.31	13.98	4.18	25.90	10.64	13.25	0.00	9.72	9.77	4.62	16.18	33.41	12.51	20.81	1.92	11.90	23.34	1.85	5.07	4.22	26.84
11	ER3a	ExonRegion	0	10.76	9.51	3.69	3.06	5.30	18.39	56.27	112.19	28.30	16.37	22.47	57.08	21.95	6.77	7.27	13.05	16.75	8.57	16.27	19.04	25.53	13.44	57.12	7.84	16.12	16.35	35.02	24.98	78.56
12	E3a_E4a	KnownJunction	0	0.00	0.00	0.97	0.00	0.00	1.50	0.00	2.44	2.44	0.00	1.30	11.99	0.00	0.00	0.00	0.00	0.92	0.00	8.09	0.00	0.00	0.00	2.46	2.63	0.00	0.00	6.86	2.29	0.00
13	I3	Intron	0	0.51	1.96	0.27	1.17	2.22	1.37	1.94	3.38	2.39	1.76	1.47	5.59	0.49	0.78	0.80	1.49	2.69	1.80	1.22	1.40	2.57	0.36	2.96	1.41	0.62	0.54	1.36	1.10	2.47
14	I3_SR1	SilentIntronRegion	0	0.67	2.34	0.21	1.42	2.37	1.51	1.76	4.03	2.03	1.30	1.82	6.11	0.55	1.00	0.94	1.86	3.32	2.48	0.91	0.91	2.90	0.56	3.93	1.42	0.86	0.68	0.51	1.11	2.54
15	I3_AR1	ActiveIntronRegion	0	0.29	1.70	0.52	0.98	2.60	1.23	3.04	2.97	4.10	3.07	0.90	6.10	0.52	0.53	0.75	1.13	2.06	0.78	1.96	2.70	2.54	0.00	1.61	1.86	0.27	0.40	3.90	1.45	2.90
16	I3	Intron	0	1.00	9.65	1.10	7.77	3.58	7.69	4.41	6.37	15.26	6.82	5.18	7.66	7.64	2.80	7.36	5.36	7.56	7.21	5.85	2.65	12.11	1.43	6.36	8.40	1.74	1.33	7.45	1.13	19.96
17	I3_AR1	ActiveIntronRegion	0	0.27	1.29	0.27	1.29	0.88	0.99	3.48	2.58	2.02	1.52	0.32	4.25	0.63	0.24	0.41	0.18	1.49	1.04	0.29	4.57	2.54	0.00	0.32	0.39	0.00	1.12	0.66	0.52	1.50
18	I3_SR2	SilentIntronRegion	0	0.10	0.79	0.08	0.00	0.00	1.28	0.30	0.81	2.20	1.31	0.58	1.68	0.10	0.04	0.45	0.49	2.56	0.88	0.47	0.44	1.60	0.18	0.35	1.58	0.35	0.15	0.45	0.16	1.01
19	I3_AR2	ActiveIntronRegion	0	2.25	22.79	1.04	27.89	6.16	18.62	8.90	15.27	30.57	19.27	16.89	21.58	22.81	11.07	19.52	17.49	18.81	18.74	14.78	7.01	28.88	3.79	15.95	30.07	4.80	3.97	20.40	2.91	40.60
20	I3_SR3	SilentIntronRegion	1	3.19	33.06	9.64	21.09	10.22	22.31	9.65	24.72	48.74	18.82	17.91	26.72	25.69	8.03	22.98	12.57	14.77	18.82	20.38	8.18	35.82	4.34	25.70	25.22	5.15	2.84	30.91	2.15	70.23
21	I3_AR3	ActiveIntronRegion	1	4.35	46.01	4.30	34.19	18.95	36.76	19.48	25.25	75.06	28.96	22.06	27.16	36.12	12.04	36.04	23.53	33.47	35.79	29.34	8.74	55.92	6.70	30.34	35.46	8.13	5.49	33.10	4.50	104.47
22	I3	Intron	0	0.07	0.22	0.17	0.00	0.17	0.42	0.07	0.13	0.73	0.40	0.28	2.01	0.04	0.03	0.32	0.25	0.66	0.66	0.22	0.16	1.46	0.31	0.62	0.22	0.00	0.16	1.00	0.61	0.91
23	I3_AR1	ActiveIntronRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.18	0.00	0.77	0.97	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.43	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
24	I3_SR1	SilentIntronRegion	0	0.00	1.97	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.44	0.00	1.24	1.30	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.43	0.00	0.00	0.00	0.00	0.00	0.00	0.98	0.00
25	I3_SR2	SilentIntronRegion	0	0.07	0.19	0.18	0.00	0.17	0.43	0.07	0.13	0.74	0.38	0.29	2.03	0.02	0.03	0.32	0.26	0.68	0.67	0.22	0.17	1.47	0.31	0.63	0.23	0.00	0.16	1.02	0.61	0.93
26	Ix	Intron	0	0.57	1.90	0.11	0.95	0.97	1.73	0.54	1.34	3.91	0.86	0.08	1.80	0.47	1.29	3.24	1.81	1.59	0.38	1.70	0.86	2.08	0.00	0.24	2.14	0.57	1.04	0.73	1.73	1.82
27	Ix_SR1	SilentIntronRegion	0	0.51	1.94	0.12	1.06	1.08	1.83	0.60	1.50	4.28	0.66	0.09	2.01	0.53	1.31	3.60	2.02	1.68	0.28	1.29	0.67	2.32	0.00	0.27	2.38	0.63	0.71	0.81	1.81	2.02
28	Ix_AR1	ActiveIntronRegion	0	1.13	1.56	0.00	0.00	0.00	0.87	0.00	0.00	0.67	2.70	0.00	0.00	0.00	1.21	0.00	0.00	0.76	1.29	5.42	2.66	0.00	0.00	0.00	0.00	0.00	4.14	0.00	1.09	0.00
29	Ix	Intron	0	1.02	4.30	0.15	3.21	0.00	1.80	0.54	0.99	2.22	1.29	0.71	1.58	0.29	1.31	1.32	1.04	3.73	1.69	2.00	1.08	2.08	0.16	0.32	1.09	0.68	0.19	0.11	2.24	0.85
30	Ix_AR1	ActiveIntronRegion	0	0.92	8.27	0.00	0.00	0.00	0.40	0.34	0.63	3.97	1.50	0.56	1.88	0.60	1.83	0.80	1.41	3.62	1.31	3.73	1.70	1.71	0.00	0.36	1.46	2.12	0.27	0.31	2.31	1.51
31	Ix_AR2	ActiveIntronRegion	0	0.00	3.28	0.00	0.00	0.00	2.32	0.00	0.00	3.16	0.00	0.74	0.77	0.00	0.00	5.60	2.53	3.26	0.00	9.90	5.09	1.43	0.00	3.16	0.00	1.07	0.00	0.00	0.00	2.01
32	Ix_AR3	ActiveIntronRegion	0	0.00	4.78	0.00	0.00	0.00	2.75	0.00	0.00	1.94	1.44	0.00	0.00	0.00	0.45	5.60	2.88	3.51	0.00	0.00	1.02	4.28	0.00	3.62	0.00	0.91	0.00	0.00	1.48	0.92
33	Ix_SR2	SilentIntronRegion	0	0.71	4.27	0.18	3.15	0.00	1.64	0.44	0.40	2.83	1.20	0.92	0.88	0.00	1.02	1.01	1.58	3.39	1.69	1.40	0.61	3.18	0.00	0.26	0.71	0.43	0.00	0.00	3.15	1.17
34	Ix	Intron	0	0.59	1.68	0.78	2.08	2.70	2.04	2.11	3.10	3.17	1.64	1.16	2.39	0.72	1.03	1.76	1.82	2.19	1.21	3.48	1.89	3.17	0.37	0.37	1.56	0.64	0.62	0.96	1.18	1.59
35	Ix_SR1	SilentIntronRegion	0	0.59	1.68	0.78	2.08	2.70	2.04	2.11	3.11	3.18	1.64	1.16	2.40	0.72	1.03	1.77	1.83	2.19	1.21	3.48	1.90	3.18	0.37	0.37	1.56	0.64	0.62	0.96	1.18	1.59
36	Ix	Intron	0	0.00	0.00	0.47	0.00	0.69	0.78	0.28	0.00	0.00	0.41	0.00	1.57	0.00	0.38	0.00	0.35	0.63	0.82	0.90	0.78	1.41	0.25	0.26	0.30	0.20	0.00	0.00	0.23	0.00
37	Ix_SR1	SilentIntronRegion	0	0.00	0.00	0.47	0.00	0.69	0.78	0.29	0.00	0.00	0.41	0.00	1.57	0.00	0.39	0.00	0.35	0.64	0.82	0.91	0.78	1.42	0.26	0.26	0.31	0.20	0.00	0.00	0.23	0.00
38	E4_Aa	NovelBoundary	1	73.44	21.33	71.53	16.61	45.10	43.13	19.62	32.05	123.36	59.28	19.20	46.99	37.83	66.03	25.31	63.49	222.53	4.62	0.00	14.56	45.00	33.84	18.32	60.95	36.48	29.91	7.01	45.11	52.99
39	ER4a	ExonRegion	0	2.02	3.50	2.82	3.49	2.70	2.87	3.66	9.66	5.33	2.58	3.09	6.36	2.19	2.67	3.59	2.70	3.01	3.78	5.22	2.59	5.74	2.11	4.25	2.50	2.78	1.79	6.24	2.38	4.25