Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	MLEC	Gene	0	111.11	295.83	346.06	123.81	383.05	297.21	70.45	159.44	275.82	319.61	342.73	251.53	233.89	380.63	75.91	177.32	181.01	326.64	244.64	79.98	259.28	171.95	342.50	291.96	280.86	300.68	467.09	390.61	200.65
2	228506	Transcript	0	183.15	276.85	293.19	172.60	349.24	322.93	115.65	222.73	244.64	313.36	340.22	260.68	210.95	473.80	84.99	173.77	180.46	386.32	271.90	127.77	272.60	315.85	351.87	222.33	281.91	287.58	264.52	408.60	151.54
3	ER1a	ExonRegion	0	56.27	39.68	55.63	51.11	105.43	65.95	34.50	37.06	20.23	68.85	41.51	54.92	39.50	95.07	22.85	65.67	39.26	144.93	46.93	31.89	52.79	83.75	105.68	30.79	39.29	77.56	43.48	112.09	37.17
4	E1_Da	NovelBoundary	0	11.80	3.49	6.50	0.00	0.00	16.92	2.17	0.00	5.42	3.56	1.61	3.07	1.62	4.99	0.00	3.06	3.42	0.00	8.09	4.13	2.05	6.66	2.27	0.00	1.63	3.91	0.00	6.87	0.00
5	E1a_E2a	KnownJunction	0	98.27	115.18	159.41	161.12	206.03	193.64	92.00	141.09	91.94	162.06	205.18	153.40	127.25	300.75	62.79	122.86	114.77	201.12	88.79	92.21	182.10	171.86	236.15	101.75	147.30	166.68	144.02	228.48	69.72
6	E1a_E5a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.04	0.00	0.00	1.56	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.47	0.00	0.00	0.00	0.00	0.00	0.00	0.00
7	I1	Intron	0	7.44	4.90	3.65	1.50	3.85	6.39	0.91	1.92	2.60	6.21	3.36	3.41	0.86	7.38	1.75	5.47	5.90	7.41	5.24	1.72	3.27	0.52	1.16	1.48	2.71	2.12	0.56	8.91	0.78
8	I1_AR1	ActiveIntronRegion	0	6.94	2.93	3.86	1.06	3.17	5.30	0.60	2.10	1.28	5.51	2.60	2.46	0.34	6.33	0.02	3.39	4.77	7.26	4.19	1.95	1.91	0.64	1.01	0.38	2.44	1.39	0.43	8.22	0.04
9	I1_SR1	SilentIntronRegion	0	8.50	2.58	3.41	5.16	1.04	6.23	0.24	3.06	1.18	3.38	1.26	3.95	1.38	4.95	1.58	6.41	4.12	4.40	6.28	0.66	2.64	0.00	1.52	0.51	2.43	2.60	0.44	9.12	1.12
10	I1_AR2	ActiveIntronRegion	0	4.57	5.26	2.28	0.94	6.53	8.78	1.05	2.95	2.34	6.59	4.21	3.95	1.21	7.62	3.98	6.70	4.54	6.56	8.34	1.29	3.86	0.47	1.83	0.85	2.35	2.51	1.68	9.27	0.70
11	I1_SR2	SilentIntronRegion	0	5.50	5.51	2.83	0.00	3.22	4.80	0.68	1.75	2.24	5.50	4.51	2.90	0.91	6.57	3.44	3.37	4.28	5.06	5.20	1.44	3.61	0.00	0.96	1.64	1.37	1.15	0.16	6.15	0.00
12	I1_AR3	ActiveIntronRegion	0	8.64	4.21	3.62	1.69	5.96	6.56	1.10	1.55	3.39	7.80	4.42	4.13	0.90	9.13	1.73	6.99	7.82	9.50	6.33	2.05	4.69	0.34	1.37	2.13	3.45	3.22	0.35	10.71	0.75
13	I1_SR3	SilentIntronRegion	0	8.62	3.78	4.22	0.00	13.86	9.08	1.71	1.24	4.32	14.53	3.08	4.38	0.90	7.04	10.23	10.67	7.16	11.21	2.95	5.25	2.85	1.10	0.00	4.16	4.07	6.66	1.11	10.42	2.66
14	I1_AR4	ActiveIntronRegion	0	9.75	8.19	3.78	3.20	5.18	7.11	2.10	1.75	4.00	6.33	4.20	3.86	0.74	10.02	2.71	5.37	8.31	8.09	7.22	2.15	2.09	0.65	0.81	2.75	3.57	2.61	0.63	8.67	2.64
15	I1_AR5	ActiveIntronRegion	0	5.87	9.90	4.71	1.57	0.00	5.55	0.00	0.81	1.41	3.71	1.58	4.65	1.42	4.65	1.20	4.62	6.82	7.55	1.28	0.60	3.32	0.16	1.19	0.94	1.96	1.24	1.03	9.58	1.83
16	I1_SR4	SilentIntronRegion	0	8.40	9.05	4.41	0.00	2.77	9.41	1.42	1.43	6.02	8.39	3.11	4.18	1.84	7.98	2.39	10.54	7.35	8.21	2.63	1.56	6.18	1.83	0.89	3.94	2.85	2.32	1.04	9.61	0.92
17	I1_AR6	ActiveIntronRegion	0	7.44	2.43	5.14	0.00	0.00	7.85	0.86	1.15	4.81	7.53	4.44	1.40	0.69	10.05	2.92	6.48	4.48	8.33	6.36	1.46	3.67	0.08	2.56	0.99	5.64	1.67	0.00	12.19	2.82
18	E2_Aa	NovelBoundary	0	13.04	17.45	1.10	0.00	0.00	3.49	0.00	2.39	6.43	3.99	7.69	4.01	0.00	5.67	7.37	7.65	10.69	4.62	0.00	0.00	2.05	0.00	0.00	2.99	3.22	4.21	0.00	12.94	6.80
19	ER2a	ExonRegion	0	201.82	234.46	226.92	214.03	424.49	265.06	108.87	245.24	155.87	304.60	306.30	262.86	189.75	440.16	54.38	160.72	158.90	345.14	234.99	119.54	241.04	298.08	339.01	170.02	272.40	237.06	198.04	362.34	129.58
20	E2_Da	NovelBoundary	0	0.00	0.00	0.92	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.84	0.00	0.00	0.95	4.62	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	6.83	0.00
21	E2a_E3a	KnownJunction	0	268.62	307.82	476.50	243.09	522.14	338.06	160.49	310.89	238.56	322.12	392.84	323.55	220.11	542.90	42.46	181.07	166.39	490.48	323.25	150.51	361.15	394.82	417.69	245.96	365.93	294.99	289.09	431.12	149.15
22	E2a_E4a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.51	3.12	1.97	0.00	0.00	0.00	4.62	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
23	E2a_E5a	NovelJunction	0	8.49	0.00	1.17	0.00	13.85	5.56	8.01	7.02	2.89	3.67	2.97	0.00	3.95	12.67	8.17	0.00	2.81	0.00	0.00	0.00	1.72	2.09	4.33	2.45	2.92	0.00	0.00	0.00	3.73
24	E3_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	7.61	1.31	4.07	0.00	0.00	1.62	0.91	0.00	0.00	0.95	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.04	0.00
25	ER3a	ExonRegion	0	215.91	371.64	438.08	142.66	434.52	364.33	156.07	293.98	284.67	439.55	500.89	374.41	288.26	615.70	97.05	193.14	275.35	433.46	361.71	135.67	326.12	358.14	463.29	271.26	378.50	367.96	380.53	618.26	219.96
26	E3_Da	NovelBoundary	0	0.00	9.70	4.06	0.00	0.00	0.00	0.00	0.00	0.00	2.04	1.61	0.00	0.00	0.00	0.00	0.00	0.00	4.62	0.00	0.00	0.00	0.00	0.00	3.05	0.00	0.00	0.00	2.29	0.00
27	E3a_E4a	KnownJunction	0	278.82	453.82	264.62	186.36	322.15	620.83	199.79	332.44	482.98	515.42	502.01	352.79	367.20	696.45	153.48	255.20	285.26	572.03	501.73	207.33	469.05	459.09	444.23	302.49	405.33	413.91	321.44	552.16	225.28
28	E3a_E5a	NovelJunction	0	2.71	17.26	2.67	0.00	13.26	7.40	0.00	0.00	3.75	7.23	1.49	2.50	1.46	6.76	0.00	0.00	0.00	4.62	0.00	0.00	15.84	8.65	2.22	0.00	1.93	3.91	0.00	11.10	3.43
29	I3	Intron	0	1.16	0.00	0.91	0.00	0.00	0.00	0.00	1.00	0.00	0.00	0.00	0.00	0.00	0.49	0.00	0.97	0.00	0.00	1.73	0.00	0.77	0.00	0.00	0.00	0.78	0.00	0.00	2.65	0.00
30	I3_AR1	ActiveIntronRegion	0	1.19	0.00	0.93	0.00	0.00	0.00	0.00	1.02	0.00	0.00	0.00	0.00	0.00	0.50	0.00	0.99	0.00	0.00	1.77	0.00	0.79	0.00	0.00	0.00	0.79	0.00	0.00	2.71	0.00
31	E4_Aa	NovelBoundary	0	5.66	0.00	0.97	0.00	0.00	1.80	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.24	0.00	0.00	3.33	0.00	0.00	0.00	0.00	0.00	0.00	2.93	0.00	0.00	0.00	1.84	0.00
32	ER4a	ExonRegion	0	271.81	370.01	316.27	228.21	324.32	443.45	147.60	322.35	373.94	405.77	427.99	314.98	262.15	674.77	102.94	233.13	224.51	485.13	352.62	192.92	345.55	544.24	409.26	327.49	365.49	401.50	240.22	485.11	185.87
33	E4_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	3.91	0.00	0.00	0.00	2.00	6.45	0.00	0.00	3.94	0.00	0.00	2.48	0.00	24.28	0.00	0.00	0.00	0.00	0.00	0.00	1.93	0.00	0.00	0.00
34	E4a_E5a	KnownJunction	0	149.82	286.59	333.81	202.53	404.09	304.41	73.35	162.34	257.42	269.03	326.34	248.97	157.47	510.42	149.69	167.61	171.61	470.95	283.24	140.75	204.40	368.52	397.00	236.81	269.02	313.53	253.51	485.22	133.24
35	I4	Intron	0	4.66	2.14	0.50	0.00	2.42	2.52	0.20	0.55	0.69	2.86	0.47	1.16	0.06	3.18	0.81	0.67	2.44	3.00	4.27	0.55	1.98	0.00	0.72	0.85	0.57	1.63	0.91	2.66	0.46
36	I4_AR1	ActiveIntronRegion	0	1.87	2.52	0.00	0.00	1.32	2.56	0.00	0.80	0.30	0.81	0.56	0.56	0.00	0.56	1.49	0.00	2.05	1.57	0.87	0.00	0.76	0.00	0.00	0.58	1.55	0.85	0.00	2.21	0.00
37	I4_SR1	SilentIntronRegion	0	6.08	2.03	0.00	0.00	4.39	2.96	0.00	0.16	0.85	3.17	1.14	0.81	0.00	3.38	0.00	1.79	2.64	1.84	5.32	2.48	3.47	0.00	0.00	1.42	0.32	1.06	0.77	4.20	1.05
38	I4_AR2	ActiveIntronRegion	0	5.01	2.08	0.83	0.00	2.03	2.35	0.33	0.61	0.76	3.37	0.20	1.48	0.11	3.92	0.91	0.46	2.49	3.88	4.93	0.00	1.80	0.00	1.20	0.73	0.36	2.09	1.24	2.24	0.39
39	E5_Aa	NovelBoundary	0	5.54	0.00	2.37	0.00	10.91	1.73	0.00	1.89	1.16	2.04	0.00	0.00	0.00	0.97	0.00	0.00	3.20	0.00	0.00	0.00	1.60	0.00	0.00	3.05	0.00	0.00	0.00	0.00	0.00
40	ER5a	ExonRegion	0	106.97	312.44	367.48	124.27	399.99	310.67	68.17	159.19	296.16	332.81	358.92	260.26	246.81	388.00	79.34	184.54	188.12	333.62	253.84	79.09	271.19	164.18	354.54	314.35	293.94	315.05	510.37	402.64	213.85
41	IG46_SR1	SilentIntergenicRegion	0	0.48	1.53	1.79	1.62	4.41	0.01	0.45	0.00	0.71	2.65	1.88	4.56	3.36	1.67	0.00	0.56	2.64	1.88	3.93	0.00	2.30	0.95	0.41	1.94	1.47	0.97	4.10	6.85	0.46
42	IG46_AR1	ActiveIntergenicRegion	0	0.00	3.28	4.49	0.00	0.00	1.83	0.00	0.00	4.49	5.05	0.00	6.18	1.30	2.87	0.00	0.00	6.01	2.73	8.30	0.00	4.28	1.80	0.00	0.72	1.43	4.71	10.99	5.43	1.34
43	IG46_SR2	SilentIntergenicRegion	0	0.00	3.28	4.49	0.00	0.00	2.75	1.08	0.00	4.49	4.33	0.00	7.09	1.30	3.63	0.00	0.00	5.34	5.28	13.28	0.00	4.28	1.80	0.00	2.15	1.43	4.71	9.52	6.41	1.34
44	IG46_SR3	SilentIntergenicRegion	0	0.98	1.76	1.13	0.00	2.24	1.24	1.23	0.42	2.35	3.07	2.19	3.21	0.29	2.68	0.00	0.00	1.53	0.21	7.87	0.63	0.76	0.89	0.42	1.76	1.64	2.44	3.68	5.01	0.76
45	IG46_AR2	ActiveIntergenicRegion	0	2.00	1.38	1.46	0.67	2.28	1.54	1.51	2.59	2.11	3.69	2.53	6.52	3.04	2.33	0.00	2.88	1.81	0.57	4.48	1.03	2.80	1.01	0.68	4.19	2.08	3.67	1.72	5.88	0.64
46	IG46_SR4	SilentIntergenicRegion	0	0.96	0.20	1.09	0.75	1.98	1.02	0.56	0.72	1.96	1.83	1.75	5.38	0.94	2.42	0.52	1.25	1.42	0.78	2.14	0.88	2.01	0.50	0.71	2.85	0.59	0.88	1.94	4.49	1.19