Order SeqName SeqType IsAE ABC_RG012 ABC_RG016 ABC_RG015 ABC_RG046 ABC_RG047 ABC_RG048 ABC_RG049 ABC_RG058 ABC_RG059 ABC_RG061 ABC_RG073 ABC_RG074 ABC_RG086 GCB_RG003 GCB_RG005 GCB_RG006 GCB_RG007 GCB_RG010 GCB_RG014 GCB_RG045 GCB_RG050 GCB_RG055 GCB_RG062 GCB_RG063 GCB_RG064 GCB_RG071 GCB_RG072 GCB_RG069 GCB_RG085 1 DRAM1 Gene 0 153.83 566.80 244.86 191.86 42.14 395.96 229.73 66.98 246.42 328.05 457.33 164.95 272.14 172.56 73.89 98.68 80.33 246.60 114.66 70.59 167.52 364.47 71.70 149.99 186.56 102.54 169.65 15.71 84.94 2 258534 Transcript 0 201.66 529.71 243.40 166.91 27.32 427.83 250.99 74.53 155.25 386.19 534.45 197.65 472.77 197.42 63.25 104.26 85.43 284.44 128.76 84.33 173.96 386.35 81.66 121.94 203.35 110.38 156.43 15.49 73.06 3 ER1a ExonRegion 0 36.36 43.45 33.05 41.40 10.02 58.46 39.09 7.78 10.80 50.21 51.07 24.24 43.45 24.07 8.98 17.78 9.46 53.31 17.14 10.09 22.30 89.88 12.17 15.38 23.74 24.55 13.05 2.72 11.14 4 E1_Da NovelBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.96 0.00 1.23 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5 E1a_E2a KnownJunction 0 84.00 289.59 116.53 64.28 14.74 314.54 182.00 34.39 61.18 280.38 336.88 110.18 228.10 118.45 51.42 76.04 38.81 190.85 56.65 49.62 131.16 262.44 52.16 97.62 106.27 81.58 32.95 8.76 46.02 6 E1a_E3a NovelJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.75 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.74 0.00 0.00 0.00 0.00 7 E1a_E7a NovelJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.04 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8 I1 Intron 0 1.27 2.89 1.02 0.58 0.24 1.81 0.36 0.09 2.54 3.02 1.24 0.94 2.10 0.33 1.99 0.14 1.30 0.76 0.67 0.22 1.83 0.61 0.00 0.97 0.71 0.51 0.09 0.26 0.50 9 I1_SR1 SilentIntronRegion 0 2.08 1.05 0.62 0.00 0.88 0.55 0.73 0.37 3.09 2.16 0.32 1.91 1.54 0.27 0.92 0.36 1.48 0.44 0.81 1.10 1.31 0.49 0.00 0.43 1.14 0.64 0.00 0.16 0.13 10 I1_AR1 ActiveIntronRegion 0 2.22 3.40 0.82 0.00 0.16 2.03 0.12 0.00 1.97 1.22 0.26 1.22 4.06 0.61 0.76 0.00 3.20 1.60 0.77 0.00 1.83 0.88 0.00 0.71 0.47 0.50 0.17 0.45 0.44 11 I1_SR2 SilentIntronRegion 0 0.98 3.23 1.14 0.78 0.11 2.06 0.31 0.04 2.50 3.44 1.57 0.69 1.97 0.30 2.39 0.11 1.00 0.72 0.62 0.06 1.95 0.60 0.00 1.12 0.65 0.48 0.10 0.26 0.58 12 E2_Aa NovelBoundary 0 3.01 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.55 3.91 4.46 0.00 0.00 0.95 0.00 3.82 0.00 0.00 0.00 0.00 2.01 2.38 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13 ER2a ExonRegion 0 192.91 425.40 174.80 120.12 23.74 567.44 311.05 70.15 110.09 436.68 588.05 184.02 465.62 189.16 70.42 102.42 77.24 298.96 109.09 112.05 232.27 371.26 87.94 118.03 197.40 98.76 168.02 12.25 68.61 14 E2_Da NovelBoundary 0 0.00 7.37 0.00 0.00 0.00 0.00 0.00 0.00 1.28 1.88 4.37 0.00 3.79 0.00 8.37 0.00 1.04 0.00 0.00 0.00 1.93 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15 E2a_E3a KnownJunction 0 293.45 616.70 227.00 172.12 39.35 694.53 323.89 127.50 168.92 538.11 664.04 210.87 651.66 225.66 60.79 162.71 107.19 414.32 121.39 122.15 288.39 459.87 91.36 149.54 260.12 129.17 187.11 23.00 97.09 16 E2a_E4a NovelJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.13 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.70 0.00 0.00 0.00 0.00 17 E2a_E5a NovelJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.52 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 18 I2 Intron 0 0.29 1.73 0.84 2.62 0.00 2.64 0.46 0.25 2.90 4.03 1.31 0.76 1.81 0.35 1.27 0.34 0.68 1.17 1.46 0.00 1.83 1.90 0.33 0.79 0.65 0.86 0.00 0.00 0.18 19 I2_SR1 SilentIntronRegion 0 0.29 1.73 0.84 2.63 0.00 2.65 0.46 0.25 2.91 4.04 1.31 0.76 1.81 0.35 1.27 0.34 0.68 1.18 1.47 0.00 1.83 1.90 0.33 0.79 0.66 0.86 0.00 0.00 0.18 20 E3_Aa NovelBoundary 0 2.54 4.85 1.35 0.00 0.00 0.00 2.57 0.00 6.24 1.80 0.00 0.00 1.66 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.55 21 ER3a ExonRegion 0 277.14 559.90 323.96 233.54 36.86 531.21 315.43 100.56 181.81 504.99 663.49 233.36 595.90 245.15 70.46 116.91 107.91 367.66 144.16 97.72 202.28 533.47 83.38 151.62 241.31 124.43 173.85 21.90 90.41 22 E3_Da NovelBoundary 0 18.70 13.28 5.41 0.00 5.45 50.91 20.77 5.08 29.26 21.73 18.28 1.11 33.60 7.33 9.97 0.00 2.16 5.27 7.87 4.13 9.15 28.59 4.68 8.73 12.54 1.59 2.24 2.29 8.65 23 E3a_E4a KnownJunction 0 246.15 308.21 320.13 131.36 21.07 397.53 189.21 89.63 116.27 358.35 481.29 190.03 491.74 196.48 35.28 87.67 75.02 258.02 113.29 71.37 140.87 488.26 72.10 120.59 211.82 70.51 118.53 7.91 70.35 24 E3a_E5a NovelJunction 0 0.00 13.57 4.34 10.78 0.00 22.02 15.79 2.44 1.52 27.68 22.97 1.69 15.60 6.27 0.00 3.37 0.00 27.74 0.00 4.05 7.22 11.33 4.83 5.62 3.75 0.00 0.00 0.00 0.00 25 E3a_E6a NovelJunction 0 38.69 137.96 34.33 10.78 12.97 160.07 68.31 21.30 68.94 66.63 102.05 31.51 65.03 39.51 24.32 17.59 11.68 33.13 16.18 27.95 45.24 71.95 6.70 13.52 32.54 10.94 36.58 1.84 25.12 26 E3a_E7a NovelJunction 0 2.48 30.35 4.98 0.00 0.00 12.47 5.84 0.00 4.60 3.75 18.13 5.63 8.28 4.28 8.37 6.12 0.00 0.00 8.09 0.00 1.64 2.19 2.02 0.00 1.93 2.19 0.00 0.00 0.00 27 I3 Intron 0 3.86 7.71 1.69 2.24 0.12 4.56 1.98 0.13 8.01 6.90 4.69 2.03 4.24 1.06 1.88 0.38 1.65 3.17 2.91 0.40 2.74 3.85 0.26 2.17 1.55 1.43 0.66 0.47 1.05 28 I3_SR1 SilentIntronRegion 0 3.86 7.71 1.69 2.24 0.12 4.56 1.99 0.13 8.01 6.90 4.69 2.03 4.24 1.06 1.88 0.38 1.65 3.17 2.92 0.40 2.74 3.85 0.26 2.17 1.55 1.43 0.66 0.47 1.05 29 Ix Intron 0 5.96 7.75 4.96 1.33 0.00 3.31 1.12 1.37 8.22 10.72 5.30 1.48 5.28 0.84 0.00 1.38 1.66 5.06 2.37 1.02 2.91 1.00 1.34 3.59 1.33 1.17 0.34 0.00 0.00 30 Ix_SR1 SilentIntronRegion 0 5.98 7.78 4.98 1.33 0.00 3.33 1.13 1.37 8.25 10.75 5.32 1.49 5.30 0.84 0.00 1.39 1.67 5.08 2.38 1.03 2.92 1.01 1.35 3.60 1.33 1.17 0.34 0.00 0.00 31 E4_Aa NovelBoundary 0 19.82 0.00 8.45 0.00 0.00 11.70 0.00 0.00 2.77 3.99 4.84 0.00 6.75 2.48 0.00 0.00 1.24 9.25 0.00 3.80 4.69 0.00 2.51 2.75 1.93 4.38 0.00 0.00 1.82 32 ER4a ExonRegion 0 231.75 491.15 321.28 167.90 26.47 320.82 239.27 100.37 138.96 380.64 537.69 220.71 558.90 224.93 60.79 87.64 95.89 327.64 120.72 80.81 131.23 511.71 89.57 108.75 193.71 131.52 135.07 20.57 82.71 33 E4_Da NovelBoundary 0 8.38 3.88 6.28 0.00 0.00 12.70 2.57 2.54 4.42 9.27 3.20 2.35 14.14 1.04 0.00 0.00 1.40 4.50 0.00 3.06 3.77 2.33 0.00 0.00 1.93 0.00 0.00 0.00 0.00 34 E4a_E5a KnownJunction 0 196.78 456.64 344.15 98.14 20.63 251.77 205.00 46.23 146.32 317.97 504.57 207.68 444.10 186.16 70.76 75.05 85.63 198.68 113.29 86.59 112.03 287.96 104.26 78.42 171.62 104.41 170.11 16.53 83.56 35 Ix Intron 0 1.42 10.04 1.11 2.51 0.00 5.24 2.12 0.43 7.81 6.80 1.44 1.25 3.17 0.56 3.69 0.87 1.74 1.35 2.74 0.21 3.17 0.56 0.14 0.75 0.83 0.30 0.71 0.00 1.54 36 Ix_SR1 SilentIntronRegion 0 1.42 10.05 1.11 2.51 0.00 5.25 2.12 0.43 7.81 6.81 1.44 1.25 3.18 0.56 3.69 0.87 1.74 1.35 2.74 0.21 3.17 0.56 0.14 0.75 0.84 0.30 0.71 0.00 1.54 37 Ix Intron 0 3.01 5.93 1.90 0.00 0.00 6.15 5.65 0.65 3.93 3.80 3.96 0.43 2.61 0.63 0.89 0.00 0.65 3.12 2.24 0.24 2.87 1.42 0.32 0.94 1.00 1.93 0.00 0.14 0.94 38 Ix_SR1 SilentIntronRegion 0 3.02 5.95 1.91 0.00 0.00 6.17 5.67 0.65 3.94 3.81 3.98 0.44 2.62 0.64 0.89 0.00 0.66 3.13 2.25 0.24 2.88 1.43 0.32 0.95 1.01 1.93 0.00 0.14 0.94 39 Ix Intron 0 1.76 5.17 1.96 1.26 0.00 8.21 1.89 0.97 6.63 7.10 4.81 1.95 3.56 0.74 1.99 1.27 0.70 2.82 3.74 0.16 5.43 0.74 0.21 1.01 1.42 1.29 1.18 0.19 1.88 40 Ix_SR1 SilentIntronRegion 0 1.76 5.19 1.96 1.26 0.00 8.23 1.89 0.97 6.64 7.12 4.82 1.95 3.57 0.74 2.00 1.27 0.70 2.83 3.75 0.16 5.44 0.74 0.21 1.01 1.43 1.29 1.18 0.19 1.88 41 Ix Intron 0 1.93 7.01 0.84 3.59 0.00 4.55 0.61 0.37 2.75 2.46 1.08 1.61 3.82 1.09 0.00 1.49 1.05 4.05 1.92 0.00 2.72 1.45 0.00 1.08 1.58 0.00 2.39 0.00 0.74 42 Ix_SR1 SilentIntronRegion 0 1.94 7.04 0.84 3.61 0.00 4.56 0.61 0.37 2.76 2.47 1.08 1.62 3.84 1.09 0.00 1.50 1.05 4.07 1.93 0.00 2.73 1.45 0.00 1.08 1.58 0.00 2.40 0.00 0.74 43 E5_Aa NovelBoundary 0 5.37 3.97 1.35 0.00 0.00 3.53 0.00 1.94 4.42 0.00 0.00 1.42 0.00 4.19 0.00 3.82 2.79 0.00 0.00 0.00 1.48 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 44 ER5a ExonRegion 0 186.26 605.59 327.55 157.16 23.05 413.24 233.04 63.72 159.58 415.19 544.77 235.09 582.66 210.83 71.67 96.00 105.74 317.65 152.04 92.47 168.43 356.21 84.41 112.73 200.35 116.14 139.35 12.13 80.21 45 E5_Da NovelBoundary 0 7.20 52.35 1.52 0.00 0.00 8.56 2.80 0.00 10.32 4.07 19.49 5.75 5.22 0.91 8.37 0.00 1.06 5.39 0.00 0.00 5.78 0.00 1.97 0.00 7.16 0.00 0.00 0.00 1.39 46 E5a_E6a KnownJunction 0 178.02 775.41 275.73 267.89 17.54 481.82 250.60 80.47 211.71 407.52 557.08 248.25 661.85 216.18 90.69 118.34 105.16 388.50 194.22 93.95 212.10 445.24 93.33 138.23 213.75 140.24 116.64 12.27 70.62 47 E5a_E7a NovelJunction 0 11.44 18.42 11.14 31.28 0.00 30.23 20.54 9.60 8.44 14.98 34.67 8.70 25.32 13.21 0.00 6.43 2.30 33.13 8.09 11.58 25.07 26.40 4.43 14.36 9.47 12.02 10.68 6.02 11.39 48 Ix Intron 0 3.22 11.05 5.43 3.58 0.00 5.16 2.02 1.38 5.19 4.33 5.36 1.85 2.27 2.82 1.37 1.86 1.49 5.38 3.19 0.00 1.07 0.45 0.45 1.61 3.22 1.18 4.58 0.00 1.01 49 Ix_SR1 SilentIntronRegion 0 3.25 11.16 5.49 3.62 0.00 5.19 2.04 1.39 5.23 4.37 5.41 1.87 2.29 2.85 1.39 1.88 1.51 5.43 3.23 0.00 1.08 0.46 0.46 1.63 3.25 1.19 4.62 0.00 1.02 50 I5 Intron 0 8.64 11.68 5.90 1.34 0.21 8.19 1.39 0.95 7.58 7.98 6.63 3.35 3.77 3.85 3.44 2.72 3.03 7.89 4.97 0.28 4.31 0.93 0.42 2.72 1.60 1.90 0.95 0.35 1.01 51 I5_SR1 SilentIntronRegion 0 2.61 3.94 5.24 0.00 0.00 4.31 0.00 1.60 2.83 5.28 2.49 1.18 2.59 1.97 0.00 1.30 1.04 1.68 2.22 0.00 4.22 0.31 0.00 3.74 0.50 0.82 0.00 0.28 0.23 52 I5_AR1 ActiveIntronRegion 0 6.82 9.42 4.33 2.43 0.66 9.40 1.21 1.09 8.84 7.27 6.36 2.75 1.62 3.05 2.26 2.03 2.48 9.27 5.42 0.93 4.28 0.78 0.00 2.08 1.94 1.93 2.16 0.63 0.41 53 I5_AR2 ActiveIntronRegion 0 0.33 9.85 1.52 0.00 0.00 13.46 2.74 3.26 17.37 13.51 5.98 3.39 1.30 3.07 6.61 9.02 3.24 16.24 9.17 0.00 6.33 3.88 0.00 1.99 4.10 7.62 1.31 0.63 1.93 54 I5_AR3 ActiveIntronRegion 0 2.14 14.13 0.00 0.00 0.00 13.27 0.20 2.76 20.34 9.89 9.04 1.30 3.77 4.76 5.60 5.06 3.61 12.83 7.69 0.00 6.35 2.79 0.00 0.00 7.00 11.00 0.00 0.00 2.68 55 I5_SR2 SilentIntronRegion 0 1.48 16.68 4.53 0.00 0.00 7.77 1.47 0.46 13.03 3.64 2.56 3.59 3.55 4.26 2.37 0.39 3.93 4.51 10.53 0.00 5.92 0.49 0.00 0.04 5.50 4.20 2.32 0.00 0.10 56 I5_AR4 ActiveIntronRegion 0 9.32 14.99 5.63 0.83 0.00 6.58 1.68 1.91 6.14 7.64 9.29 2.98 3.47 3.71 3.29 4.38 4.48 7.58 6.39 0.63 2.14 0.83 0.00 1.48 1.46 3.88 2.05 0.19 1.00 57 I5_SR3 SilentIntronRegion 0 11.29 12.39 6.65 1.50 0.15 8.39 1.69 0.61 7.54 9.16 6.98 3.89 5.14 4.75 4.73 2.95 3.04 8.69 4.97 0.00 4.99 1.13 0.87 3.09 1.41 1.18 0.33 0.29 1.36 58 I5_AR5 ActiveIntronRegion 0 5.12 16.38 8.35 0.00 0.00 9.54 0.87 0.00 8.52 5.63 5.94 4.95 3.23 2.45 2.00 1.08 4.21 5.02 2.08 0.00 2.79 0.39 0.00 4.20 1.86 2.39 0.40 0.35 1.31 59 E6_Aa NovelBoundary 0 2.60 12.22 6.00 0.00 0.00 7.56 2.92 0.00 8.95 1.72 10.38 9.04 1.21 2.30 7.97 13.08 5.65 4.62 8.09 0.00 3.13 2.38 0.00 0.00 5.27 0.00 0.00 0.00 0.00 60 ER6a ExonRegion 0 264.27 777.29 227.62 284.49 42.16 516.02 346.02 97.06 188.12 458.53 719.64 267.86 635.57 285.94 73.59 129.58 101.92 320.72 163.56 98.31 199.07 479.86 114.89 147.27 292.83 145.77 223.01 24.35 80.10 61 E6_Da NovelBoundary 0 3.01 26.76 2.77 0.00 0.00 3.41 0.00 0.00 8.92 1.76 0.00 3.89 4.01 1.13 0.00 3.52 1.40 4.62 0.00 0.00 1.85 0.00 0.00 0.00 1.67 0.00 0.00 0.00 0.00 62 E6a_E7a KnownJunction 0 270.98 839.98 184.99 203.83 26.97 547.58 364.11 75.10 199.83 499.92 775.81 251.89 525.50 248.22 66.17 168.14 106.99 286.40 234.46 100.81 220.49 329.58 94.07 158.87 312.40 151.40 346.59 20.89 65.23 63 I6 Intron 0 4.34 5.02 1.41 0.00 0.41 2.44 0.34 0.62 3.69 2.93 1.11 1.46 0.87 1.26 2.24 1.05 0.63 4.31 1.89 0.23 0.84 0.46 0.15 1.82 0.00 0.40 0.15 0.14 0.28 64 I6_AR1 ActiveIntronRegion 0 1.17 5.47 0.95 0.00 0.00 2.34 0.00 0.00 0.00 0.00 0.67 2.45 0.00 0.51 0.00 1.38 0.85 3.27 0.00 0.00 0.81 0.98 0.00 1.22 0.00 0.00 0.00 0.00 0.00 65 I6_SR1 SilentIntronRegion 0 0.43 0.00 0.00 0.00 0.00 1.37 0.00 0.00 0.00 0.43 0.00 0.00 0.00 1.27 0.00 0.25 0.00 0.00 0.00 0.00 0.00 0.36 0.00 0.00 0.00 0.00 0.00 0.00 0.00 66 I6_AR2 ActiveIntronRegion 0 2.92 2.19 1.17 0.00 0.23 2.21 0.00 1.42 3.27 2.78 0.00 0.11 0.89 0.52 0.00 1.92 0.00 1.49 0.00 0.00 0.00 0.00 0.00 1.40 0.00 0.67 0.00 0.00 0.49 67 I6_SR2 SilentIntronRegion 0 3.79 6.52 1.40 0.00 0.71 2.96 0.62 0.85 3.56 3.80 1.37 1.91 1.42 1.50 2.41 1.07 0.73 5.68 2.32 0.43 0.88 0.28 0.28 1.81 0.00 0.60 0.28 0.15 0.42 68 I6_AR3 ActiveIntronRegion 0 10.09 2.29 2.14 0.00 0.00 1.19 0.00 0.00 7.93 3.08 1.46 0.21 0.00 1.63 5.28 0.26 0.60 3.17 3.54 0.00 1.37 0.87 0.00 2.80 0.00 0.00 0.00 0.31 0.00 69 E7_Aa NovelBoundary 0 10.62 0.00 1.12 0.00 0.00 4.83 0.00 0.00 1.55 7.59 4.68 4.64 0.00 7.36 7.57 0.00 1.04 28.77 0.00 0.00 0.00 2.43 0.00 0.00 0.00 2.19 0.00 0.00 0.00 70 ER7a ExonRegion 0 163.57 696.92 287.42 227.60 52.53 466.89 264.13 75.96 324.62 371.99 523.45 185.26 261.01 195.24 91.25 117.15 93.66 275.04 133.89 80.38 200.92 406.88 81.94 188.10 218.22 116.46 209.34 18.04 103.76 71 IG46_SR1 SilentIntergenicRegion 0 0.00 1.24 0.00 0.00 0.00 2.10 0.78 0.00 2.23 0.74 0.90 0.71 12.90 0.00 0.00 2.22 0.83 0.00 0.00 0.00 0.55 1.91 0.00 0.83 1.03 0.61 1.42 0.00 0.00 72 IG46_AR1 ActiveIntergenicRegion 0 0.40 0.00 0.00 0.00 0.00 1.10 0.00 0.00 2.14 1.19 1.32 0.00 12.60 0.00 3.89 1.48 0.81 0.00 1.13 0.00 0.00 0.80 0.64 0.00 0.58 0.44 0.36 0.58 0.00 73 IG46_SR2 SilentIntergenicRegion 0 0.32 0.00 0.28 0.00 0.00 0.33 0.00 0.00 1.90 1.94 2.40 0.00 0.97 0.00 0.00 0.80 0.48 0.77 0.00 0.00 0.00 0.00 0.00 0.00 0.46 0.11 0.26 0.00 0.64