Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	TMEM218	Gene	0	133.67	38.85	82.80	190.06	116.23	54.52	129.49	132.92	33.21	62.83	40.64	47.95	58.65	34.71	81.44	58.07	45.92	49.86	28.85	94.57	54.82	63.46	39.75	40.54	61.08	39.02	63.33	49.79	39.28
2	279968	Transcript	0	161.75	31.37	152.29	227.87	283.07	66.66	184.01	178.99	44.65	46.90	32.04	62.26	79.34	38.72	117.66	76.23	47.96	54.50	21.01	124.37	76.40	84.51	46.44	29.66	65.56	87.76	74.58	120.32	89.89
3	455225	Transcript	0	30.69	3.81	6.52	15.34	19.82	7.73	21.72	18.13	6.78	10.46	10.81	9.22	11.50	7.62	8.98	13.25	8.75	17.16	1.69	23.99	10.87	25.65	5.88	12.31	13.88	10.17	8.68	8.14	6.54
4	IG51	Intergenic	0	18.22	3.65	0.95	8.13	11.07	2.34	12.56	15.65	1.59	3.27	0.67	3.49	6.97	1.03	0.00	4.22	2.54	7.82	1.81	15.61	4.85	6.13	3.07	1.22	4.86	4.45	5.19	0.92	0.76
5	IG51_AR1	ActiveIntergenicRegion	0	18.63	3.73	0.97	8.31	11.32	2.39	12.85	16.00	1.62	3.35	0.69	3.57	7.13	1.04	0.00	4.31	2.60	8.00	1.85	15.97	4.96	6.27	3.14	1.25	4.97	4.55	5.31	0.94	0.78
6	ER1a	ExonRegion	0	223.29	27.33	184.81	452.60	468.66	87.69	198.83	232.34	37.57	69.90	52.57	78.40	101.32	52.37	155.70	110.54	55.16	87.77	37.65	152.56	99.85	126.38	66.57	35.08	85.11	104.90	98.59	148.27	108.09
7	E1_Da	NovelBoundary	0	5.78	0.00	7.08	0.00	0.00	0.00	2.92	2.29	4.42	2.04	0.00	0.00	1.37	1.13	0.00	0.00	6.51	18.49	0.00	0.00	5.50	0.00	2.51	0.00	1.70	0.00	0.00	2.07	1.78
8	E1a_E2b	KnownJunction	0	176.90	42.17	387.18	390.62	577.25	71.25	259.13	216.48	55.55	51.73	46.31	121.50	94.86	51.49	135.94	81.70	89.61	67.81	24.28	189.46	70.39	84.55	66.44	36.25	88.88	144.62	127.87	266.31	149.09
9	E1a_E4a	NovelJunction	0	0.00	0.00	5.93	0.00	14.74	1.92	10.76	4.78	3.11	0.00	0.00	1.14	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.05	0.00	10.60	0.00	0.00	8.25
10	I1	Intron	0	8.56	1.81	1.15	3.83	2.04	4.32	1.85	1.05	1.05	2.58	0.89	1.22	0.40	1.97	2.50	2.68	2.49	6.02	1.39	2.09	3.15	0.54	0.30	1.19	1.17	0.50	0.55	1.63	0.76
11	I1_AR1	ActiveIntronRegion	0	8.07	0.54	2.66	2.74	0.26	1.46	2.05	0.47	0.64	1.64	0.37	0.94	0.25	1.10	0.59	0.61	2.34	7.07	1.22	0.70	0.88	0.00	0.23	1.09	0.91	0.30	0.00	2.90	0.43
12	I1_SR1	SilentIntronRegion	0	10.99	0.73	1.24	3.93	0.38	3.85	0.29	1.10	0.91	1.86	0.73	1.55	0.00	1.19	0.00	3.54	1.75	5.87	0.87	3.36	3.31	0.00	0.74	0.00	0.20	0.93	1.49	0.66	1.55
13	I1_AR2	ActiveIntronRegion	0	17.29	3.13	5.65	13.79	2.37	8.00	13.63	6.77	0.81	3.22	3.47	6.10	1.57	6.01	7.57	2.07	0.73	9.83	1.55	13.38	11.13	3.50	1.76	4.18	5.54	0.10	7.99	3.96	0.31
14	I1_SR2	SilentIntronRegion	0	4.99	0.00	0.08	2.84	0.00	1.46	1.59	0.96	0.65	4.40	0.00	1.33	0.02	3.11	0.00	0.04	3.02	7.50	2.43	0.29	0.11	0.05	0.05	0.00	0.00	2.44	0.03	0.05	1.02
15	I1_AR3	ActiveIntronRegion	0	28.92	5.46	1.12	8.68	3.21	15.70	15.55	5.21	0.23	8.69	1.03	1.07	1.87	4.84	4.75	8.54	2.73	12.40	5.52	6.19	13.90	12.59	1.50	3.24	4.99	5.57	0.00	8.07	2.30
16	I1_SR3	SilentIntronRegion	0	7.29	2.15	0.63	3.42	2.71	4.54	1.11	0.74	1.20	2.63	0.92	0.96	0.41	1.96	3.10	2.88	2.73	5.42	1.36	1.49	2.94	0.26	0.14	1.25	1.10	0.27	0.14	1.31	0.65
17	E2_Aa	NovelBoundary	1	47.90	20.17	209.38	46.59	30.65	35.64	21.40	30.36	184.54	58.60	47.26	189.27	102.35	129.26	25.51	52.86	774.59	0.00	0.00	14.31	34.41	14.68	30.14	23.93	21.33	29.01	16.50	57.24	133.64
18	ER2a	ExonRegion	0	7.57	0.43	1.50	1.56	2.81	2.37	1.15	0.82	2.20	3.45	0.85	1.00	1.44	2.05	0.27	1.17	4.21	6.41	1.04	0.84	1.17	0.18	0.31	0.93	2.02	2.04	0.22	0.97	2.76
19	E2_Ab	KnownBoundary	0	7.79	0.00	1.05	0.00	7.37	0.00	0.00	0.00	6.21	9.23	1.55	3.19	1.62	2.24	0.00	0.00	4.97	9.25	0.00	0.00	0.00	0.00	0.00	0.00	8.60	0.00	0.00	0.00	0.00
20	ER2b	ExonRegion	0	134.01	19.32	166.81	151.13	179.53	49.51	146.80	145.18	32.57	60.04	40.86	69.96	62.56	39.55	71.24	47.44	69.83	61.28	16.29	95.49	59.83	65.86	28.76	30.20	65.12	50.06	65.32	107.87	57.77
21	E2_Da	KnownBoundary	0	60.11	3.78	13.20	9.27	36.84	28.70	71.63	72.06	22.17	24.21	7.12	13.22	18.41	28.40	24.52	18.44	29.04	46.23	0.00	55.82	25.39	40.30	4.48	20.04	17.73	12.40	21.37	19.32	16.18
22	E2a_E3a	KnownJunction	0	74.32	4.27	14.50	27.61	41.12	14.89	55.96	50.46	12.12	16.50	26.29	23.01	31.75	15.73	16.94	29.38	14.25	39.30	0.00	61.69	24.79	74.72	13.89	25.66	33.38	26.01	16.55	18.11	14.46
23	E2a_E4a	NovelJunction	0	0.00	0.00	1.10	0.00	7.37	0.00	5.55	0.00	1.74	3.83	0.00	3.07	1.78	0.00	0.00	0.00	4.95	0.00	0.00	7.77	0.00	6.76	5.02	0.00	0.00	0.00	0.00	4.00	0.00
24	ER2c	ExonRegion	0	196.16	22.42	18.20	32.04	45.09	68.65	186.07	204.76	59.49	41.11	19.96	29.48	53.97	41.70	79.56	63.11	29.11	39.31	22.12	121.73	85.29	96.01	23.12	39.12	53.78	43.70	27.40	39.05	45.91
25	E2_Db	NovelBoundary	0	32.85	3.97	9.92	28.04	18.72	25.51	27.35	35.58	31.24	28.08	7.94	10.24	8.79	21.40	0.00	56.00	32.68	32.36	8.09	17.78	41.23	37.97	11.72	2.21	18.72	30.98	17.15	13.21	14.46
26	E2b_E3a	KnownJunction	0	50.67	33.54	18.96	36.24	41.26	39.06	92.00	62.36	26.01	24.85	9.33	19.67	67.19	9.33	99.46	49.57	17.96	23.12	0.00	33.74	50.06	31.12	29.65	8.19	34.48	57.81	44.48	27.63	56.45
27	E2b_E4a	NovelJunction	0	8.20	14.54	2.96	10.35	20.04	10.78	78.56	38.67	12.49	22.17	14.11	10.54	5.38	5.10	0.00	32.74	5.20	0.00	0.00	0.00	9.55	2.14	2.36	0.00	10.68	10.77	5.96	36.12	0.00
28	I2	Intron	1	42.84	11.84	22.72	89.40	23.41	17.80	46.38	30.32	24.54	26.31	7.42	11.72	6.52	13.74	21.77	36.68	18.14	25.87	12.77	21.80	28.05	16.72	4.91	19.60	18.27	8.54	14.65	9.38	5.46
29	I2_AR1	ActiveIntronRegion	1	43.11	11.92	22.86	89.92	23.56	17.91	46.67	30.51	24.69	26.48	7.47	11.80	6.56	13.83	21.91	36.91	18.25	26.03	12.85	21.93	28.23	16.82	4.94	19.72	18.39	8.60	14.73	9.44	5.49
30	E3_Aa	NovelBoundary	0	89.19	19.20	17.09	255.16	66.61	12.01	44.28	53.90	19.76	33.43	10.38	15.60	13.47	16.29	51.42	67.85	46.80	14.64	0.00	34.90	24.79	48.23	9.41	19.86	7.16	28.11	9.24	17.34	10.14
31	ER3a	ExonRegion	0	176.77	41.45	146.94	241.79	132.92	62.04	181.83	144.10	23.84	73.78	40.16	71.79	82.14	47.93	124.21	90.39	65.06	108.05	25.06	166.65	63.14	103.05	69.41	39.63	66.84	75.65	86.89	87.86	53.80
32	E3_Da	NovelBoundary	0	25.66	21.04	5.83	9.27	0.00	7.21	2.57	6.57	7.22	5.59	1.61	6.90	1.62	7.13	8.37	6.73	15.58	9.25	0.00	0.00	1.76	6.03	0.00	5.68	9.28	10.30	0.00	2.20	1.72
33	E3a_E4a	KnownJunction	0	203.62	38.39	251.79	466.76	226.95	76.12	231.66	143.28	26.98	127.31	48.24	68.58	84.36	44.00	143.11	131.96	66.83	125.99	40.46	172.18	53.91	97.57	99.44	69.98	86.38	59.69	160.42	97.91	41.13
34	I3	Intron	0	18.49	9.61	5.77	22.96	6.62	17.53	19.87	14.97	12.50	14.05	6.08	8.66	3.79	9.89	13.87	28.09	24.73	19.95	5.12	9.17	14.32	1.78	1.56	12.98	9.51	4.16	1.02	8.63	5.31
35	I3_SR1	SilentIntronRegion	0	16.25	8.63	4.25	19.43	5.77	13.19	16.54	16.83	9.67	10.72	5.83	7.93	3.51	8.23	14.06	23.31	24.48	17.72	5.79	7.60	10.55	1.14	1.72	10.75	7.21	4.11	0.48	9.29	3.23
36	I3_AR1	ActiveIntronRegion	0	22.66	12.21	8.88	30.63	5.87	20.96	22.43	13.15	17.05	17.37	6.01	9.88	4.58	12.21	14.49	38.04	26.70	25.52	3.84	12.20	19.85	2.91	0.97	14.89	12.50	4.64	1.84	7.14	8.73
37	I3_SR2	SilentIntronRegion	1	29.29	9.85	3.37	18.69	16.61	55.14	50.17	14.32	18.10	39.30	11.90	15.80	4.19	18.54	16.80	27.56	25.82	16.98	13.07	10.31	34.39	3.20	3.21	32.98	22.71	4.37	3.66	14.13	10.44
38	I3_AR2	ActiveIntronRegion	1	27.87	7.39	3.37	14.63	19.93	54.99	50.39	11.97	17.84	37.36	11.90	13.91	3.90	18.71	16.80	25.31	23.04	14.33	13.01	11.24	27.10	1.80	3.62	34.42	21.80	2.55	3.66	14.67	9.40
39	I3_AR3	ActiveIntronRegion	0	10.84	2.61	2.48	12.69	19.19	31.17	30.41	6.34	11.83	21.19	7.77	6.18	1.15	9.71	5.44	14.07	13.82	7.95	2.80	5.54	12.96	0.80	3.40	18.41	10.55	1.53	0.22	9.68	3.59
40	E4_Aa	NovelBoundary	0	34.27	7.56	11.73	47.24	0.00	24.71	16.88	11.84	20.16	30.16	6.11	13.52	6.34	12.14	41.86	38.17	34.15	19.14	0.00	12.07	21.74	6.08	4.24	11.54	8.90	10.90	7.16	4.58	11.88
41	ER4a	ExonRegion	0	374.42	104.83	282.46	598.00	335.84	128.97	354.17	380.69	68.33	141.32	83.52	104.98	134.40	84.57	193.41	158.75	111.84	126.58	74.87	270.56	129.61	172.61	102.58	111.71	156.09	87.19	147.45	105.32	64.02
42	E4_Da	NovelBoundary	0	8.55	0.00	5.31	0.00	0.00	0.00	0.00	0.00	0.00	2.00	0.00	0.00	0.00	1.31	0.00	0.00	3.42	0.00	0.00	0.00	1.89	0.00	0.00	0.00	3.49	1.89	0.00	0.00	0.00
43	E4a_E5a	KnownJunction	0	348.07	111.49	297.19	807.77	501.95	152.66	398.79	300.74	69.52	130.98	49.98	155.57	174.41	103.01	324.29	185.36	151.08	173.25	89.02	253.89	146.24	167.88	96.97	118.73	113.20	62.83	60.38	98.58	110.86
44	I4_AR1	ActiveIntronRegion	0	4.29	0.00	0.00	0.00	0.00	1.37	0.00	1.38	1.12	1.44	0.00	0.00	0.00	2.04	0.00	5.06	2.50	0.00	0.00	0.00	5.71	0.00	0.00	4.30	0.18	0.00	0.00	1.63	0.00
45	I4_SR2	SilentIntronRegion	0	1.82	1.64	0.00	0.00	0.00	1.80	0.00	0.83	0.24	1.10	0.61	0.00	0.00	0.69	2.80	1.19	3.29	0.00	0.00	0.00	1.14	0.00	0.00	0.62	0.00	0.00	0.00	0.57	0.00
46	E5_Aa	NovelBoundary	0	8.49	0.00	0.00	0.00	0.00	1.57	0.00	0.00	1.22	1.84	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.61	3.67	0.00	0.00	0.00	1.32
47	ER5a	ExonRegion	0	263.22	89.37	150.06	396.62	210.75	115.42	260.14	276.21	72.10	137.68	95.05	101.49	126.67	69.04	166.13	111.64	92.26	87.36	65.72	178.37	111.40	122.43	82.34	86.63	132.74	70.44	137.23	88.45	78.87
48	E5_Da	KnownBoundary	0	31.50	37.52	19.26	62.12	100.07	25.97	52.24	14.58	26.46	16.30	9.78	12.11	12.87	13.91	91.49	16.06	18.44	0.00	0.00	32.42	20.70	12.20	12.46	19.38	19.97	2.19	9.14	7.64	6.31
49	ER5b	ExonRegion	0	10.17	6.73	3.56	16.84	15.54	5.92	8.05	3.12	6.01	11.43	5.30	3.66	1.33	5.09	9.72	9.21	7.81	5.77	4.04	9.42	6.64	2.04	3.43	10.33	6.26	2.48	9.26	5.36	2.41