Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	RAB6A	Gene	0	162.20	136.94	138.52	197.27	281.36	200.78	112.14	75.41	75.84	137.52	172.43	187.33	176.90	299.74	64.16	129.93	177.10	190.72	119.70	229.37	154.11	153.63	169.36	157.07	169.36	190.23	152.10	133.39	149.01
2	393571	Transcript	0	8.55	9.70	1.54	0.00	0.00	6.64	0.00	3.98	2.77	2.04	0.00	5.75	1.46	3.21	0.00	0.00	3.94	0.00	0.00	3.72	2.05	0.00	1.97	6.04	1.89	3.26	0.00	0.00	3.14
3	310653	Transcript	0	212.71	204.83	193.97	138.83	285.19	313.83	194.82	96.49	95.79	203.02	204.93	284.35	254.96	385.99	97.25	169.90	187.91	264.79	179.10	382.19	233.56	195.44	254.74	251.14	279.22	242.45	242.74	137.24	186.66
4	336083	Transcript	0	204.83	171.41	161.30	201.87	262.40	306.74	154.94	94.62	116.36	187.24	308.89	332.18	246.57	519.43	52.26	229.08	331.95	330.77	200.16	256.70	252.13	208.12	211.29	140.27	239.68	399.01	154.40	307.07	208.91
5	IG19_AR2	ActiveIntergenicRegion	0	0.95	0.91	1.20	14.25	26.27	6.10	1.78	0.00	0.74	1.74	1.58	1.09	4.27	2.49	1.79	1.64	2.52	0.43	3.45	1.65	1.85	1.33	3.33	1.42	0.33	1.39	4.84	1.80	2.81
6	ER1a	ExonRegion	0	111.99	40.80	75.52	64.78	105.80	61.57	53.44	33.88	12.69	50.93	33.35	63.69	73.27	122.95	30.83	95.77	74.06	176.77	49.43	132.16	43.28	110.11	94.05	45.46	48.19	92.11	23.28	55.00	53.51
7	E1_Ab	KnownBoundary	0	300.41	106.35	314.18	211.38	372.41	175.07	99.84	93.71	33.04	138.17	124.55	172.32	186.86	342.92	85.91	223.76	169.31	462.22	185.68	342.71	167.98	217.71	178.83	165.03	219.05	198.44	68.48	143.78	135.72
8	ER1b	ExonRegion	0	364.97	178.96	309.03	361.98	390.33	333.51	202.90	117.11	71.13	189.75	248.75	299.85	268.07	475.76	83.77	261.93	237.55	393.47	152.89	414.96	245.81	301.91	280.83	195.74	230.84	359.79	170.88	214.66	214.90
9	E1_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.31	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	6.57	2.48	0.00	1.45
10	E1a_E2a	KnownJunction	0	454.25	294.44	299.30	437.21	504.75	574.94	408.91	102.27	137.95	336.34	380.47	492.16	414.52	695.03	119.99	345.62	424.50	539.79	178.03	634.05	314.06	349.75	441.87	291.72	372.98	501.75	374.07	315.55	288.44
11	I1_SR4	SilentIntronRegion	0	0.00	3.35	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.29	0.00	0.95	0.00	0.00	4.80	0.00	1.17	0.00	0.00	0.00	0.28	0.00	0.00	0.00	0.00	0.82	0.00	0.00	0.70
12	I1_AR2	ActiveIntronRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.44	0.00	0.21	0.00	0.00	0.00	0.00	1.00	0.00	0.00	0.00	1.43	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
13	E2_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.40	0.00	8.09	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.63
14	ER2a	ExonRegion	0	603.30	376.48	327.70	427.98	588.92	702.09	456.52	266.43	179.42	439.27	606.59	628.23	558.49	995.08	118.28	457.25	514.55	601.76	338.90	739.45	528.29	558.64	584.74	431.07	599.96	743.81	449.32	414.97	434.07
15	E2_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.34	2.04	0.00	0.00	0.00	0.00	0.00	0.00	0.00	9.25	0.00	3.64	0.00	0.00	0.00	0.00	1.44	0.00	0.00	0.00	0.00
16	E2a_E3a	KnownJunction	0	653.26	324.20	303.04	506.45	604.52	699.90	372.01	329.55	228.15	430.53	525.42	586.98	493.49	1007.57	157.26	464.58	498.00	568.82	356.07	821.86	565.96	597.75	622.71	458.90	657.19	660.23	430.83	392.03	446.08
17	E2a_E5a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.13	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
18	I2_AR1	ActiveIntronRegion	0	0.84	1.71	0.00	0.00	0.00	1.07	0.00	0.00	2.41	0.56	1.40	0.00	0.25	0.00	0.90	0.48	1.75	0.44	0.62	0.54	1.67	0.00	0.00	0.00	0.56	0.31	0.00	0.00	0.00
19	I2_AR2	ActiveIntronRegion	0	0.00	0.00	0.00	0.00	0.00	1.64	1.31	0.00	2.01	1.54	0.00	1.67	0.00	0.70	2.33	2.37	1.05	1.42	0.00	1.83	1.89	0.00	0.00	0.00	2.84	1.67	5.66	0.00	0.00
20	E3_Aa	NovelBoundary	0	5.90	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.46	0.00	0.00	1.54	0.00	1.04	0.00	0.00	2.23	4.62	0.00	0.00	3.93	0.00	0.00	0.00	1.44	3.95	0.00	0.00	2.05
21	ER3a	ExonRegion	0	655.55	451.01	383.52	416.55	603.04	860.21	390.50	308.24	219.40	527.99	693.08	640.07	560.62	1123.36	201.62	533.09	531.15	601.33	376.98	825.40	719.77	620.54	665.47	489.31	681.82	812.10	556.18	490.19	455.34
22	E3_Da	NovelBoundary	0	0.00	0.00	1.30	0.00	0.00	6.29	0.00	0.00	6.55	0.00	0.00	0.00	1.69	3.01	8.37	0.00	1.06	0.00	8.09	0.00	1.56	0.00	0.00	0.00	0.00	11.24	0.00	2.29	1.72
23	E3a_E4a	KnownJunction	0	294.63	316.35	229.86	224.97	393.19	439.08	233.04	143.28	103.48	270.31	286.36	326.23	296.18	539.71	154.47	228.12	223.67	373.48	234.68	482.55	326.70	281.69	403.01	324.08	386.05	360.82	353.20	153.49	219.90
24	E3a_E5a	KnownJunction	1	244.79	174.12	161.42	216.99	286.20	378.61	189.27	121.43	111.00	248.18	368.67	307.13	256.47	566.46	66.97	298.50	288.14	384.01	258.73	281.76	317.39	249.50	246.74	162.04	261.67	528.87	161.57	385.96	208.02
25	E3a_E6a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.33	0.00	0.00	0.00	0.00	0.00	0.00	0.00	6.95	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.40	0.00
26	E3a_E7a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	1.96	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
27	E3a_E8a	KnownJunction	0	8.55	9.70	1.54	0.00	0.00	6.64	0.00	3.98	2.77	2.04	0.00	5.75	1.46	3.21	0.00	0.00	3.94	0.00	0.00	3.72	2.05	0.00	1.97	6.04	1.89	3.26	0.00	0.00	3.14
28	I3	Intron	0	2.44	1.72	0.41	1.75	1.78	2.79	1.23	0.45	4.85	3.81	1.26	2.68	1.31	1.14	5.58	3.04	3.45	2.89	2.33	1.62	5.33	0.81	0.59	2.10	1.51	1.85	1.34	2.25	1.44
29	I3_AR1	ActiveIntronRegion	0	2.18	1.15	0.51	0.00	3.28	3.60	1.84	0.70	5.41	3.28	0.97	1.91	1.60	1.23	10.03	1.05	3.07	2.39	1.33	0.82	5.26	1.79	1.29	2.73	1.43	1.75	1.60	2.45	0.68
30	I3_SR1	SilentIntronRegion	0	2.62	2.11	0.34	2.92	0.79	2.26	0.82	0.28	4.48	4.18	1.45	3.20	1.13	1.08	2.62	4.37	3.72	3.24	3.02	2.15	5.39	0.15	0.12	1.68	1.57	1.92	1.17	2.13	1.95
31	E4_Aa	NovelBoundary	0	2.54	0.00	0.00	0.00	0.00	1.61	0.00	0.00	0.00	1.52	0.00	0.00	0.00	0.00	0.00	0.00	0.90	0.00	0.00	0.00	0.00	2.48	0.00	5.32	3.79	0.00	0.00	0.00	1.91
32	ER4a	ExonRegion	0	304.68	279.56	291.40	196.68	385.51	426.85	287.97	147.82	115.35	264.14	295.85	423.90	351.03	572.29	102.18	221.84	278.19	341.12	224.11	522.68	285.71	281.43	343.14	314.43	371.37	314.87	322.56	211.12	242.67
33	E4_Da	NovelBoundary	0	5.31	0.00	0.00	0.00	0.00	0.00	0.00	2.54	3.05	3.67	0.00	4.19	1.50	0.00	0.00	0.00	3.29	0.00	0.00	0.00	5.54	0.00	0.00	3.05	0.00	1.67	0.00	2.29	0.00
34	E4a_E6a	KnownJunction	0	240.19	172.47	253.21	122.73	329.82	358.01	229.89	88.93	101.47	260.09	219.96	367.49	319.08	399.97	63.58	208.54	227.46	320.95	218.50	468.16	288.31	205.02	262.35	275.33	338.92	276.11	275.72	172.09	246.74
35	I4	Intron	0	0.00	7.47	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.70	10.69	0.00	0.00	4.96	2.47	0.00	1.10	0.00	0.00	0.00	0.00	0.00	0.00	2.52	0.00
36	I4_SR1	SilentIntronRegion	0	0.00	7.70	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.72	11.03	0.00	0.00	5.12	2.55	0.00	1.14	0.00	0.00	0.00	0.00	0.00	0.00	2.60	0.00
37	E5_Aa	NovelBoundary	0	3.01	0.00	0.00	0.00	0.00	5.41	0.00	0.00	3.20	5.95	0.00	0.00	0.00	4.52	8.97	0.00	6.24	4.62	0.00	4.13	7.42	0.00	0.00	5.26	5.68	2.19	0.00	0.00	6.24
38	ER5a	ExonRegion	0	217.74	154.14	182.41	214.14	233.38	278.14	139.14	88.34	116.87	165.23	308.92	363.38	254.09	534.52	44.17	227.41	368.23	301.08	155.63	258.37	228.93	209.41	198.94	133.57	224.12	415.36	126.74	284.52	216.33
39	E5_Da	NovelBoundary	0	7.96	4.85	0.00	28.47	0.00	1.57	0.00	0.00	0.00	4.07	0.00	1.72	0.00	0.00	0.00	2.98	1.31	4.62	8.09	0.00	1.60	0.00	2.51	0.00	0.00	1.63	0.00	0.00	0.00
40	E5a_E6a	KnownJunction	0	151.95	185.95	140.07	174.49	267.63	263.47	136.40	74.10	121.20	148.32	249.09	326.02	229.15	457.31	45.64	161.34	339.48	307.21	186.13	229.99	210.06	165.44	188.18	125.19	233.26	252.81	174.89	250.72	202.37
41	I5	Intron	0	1.20	0.90	0.28	1.60	0.68	0.77	0.34	0.46	1.97	1.57	1.43	1.26	0.07	1.00	1.08	1.46	1.63	2.69	3.75	0.85	2.19	0.10	0.30	1.14	0.44	0.61	0.20	0.46	0.73
42	I5_SR1	SilentIntronRegion	0	1.20	0.90	0.28	1.61	0.68	0.77	0.34	0.46	1.98	1.58	1.43	1.26	0.07	1.00	1.08	1.46	1.63	2.70	3.76	0.85	2.20	0.10	0.30	1.14	0.44	0.62	0.21	0.46	0.73
43	E6_Aa	NovelBoundary	0	3.01	4.85	0.00	10.14	0.00	3.72	0.00	2.44	0.00	4.07	0.00	1.14	0.00	2.68	0.00	0.00	2.63	0.00	0.00	0.00	3.93	0.00	0.00	0.00	1.74	0.00	0.00	6.78	0.00
44	ER6a	ExonRegion	0	552.65	491.50	407.76	484.33	752.70	617.49	355.89	260.22	241.56	461.13	651.75	749.93	575.82	1061.28	178.57	423.54	648.87	504.12	392.86	779.79	498.23	471.40	602.30	527.03	689.10	601.51	548.10	481.49	460.48
45	E6_Da	NovelBoundary	0	0.00	3.88	0.00	0.00	0.00	0.00	2.69	0.00	1.46	1.76	1.39	2.44	0.00	2.19	0.00	0.00	2.43	0.00	0.00	0.00	1.60	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
46	E6a_E7a	KnownJunction	0	517.60	527.80	405.74	418.23	830.73	511.21	390.26	230.37	262.65	555.28	586.85	818.36	666.98	1046.32	242.37	423.96	715.16	743.74	541.75	720.23	402.23	383.15	623.45	536.49	665.98	801.12	560.94	529.16	550.96
47	E6a_E8a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.62	0.00	3.89	0.00	0.00	2.36	0.00	1.93	0.00	0.00	0.00	0.00
48	ER7a	ExonRegion	0	637.71	490.43	460.66	568.13	915.07	684.94	432.68	335.43	327.95	585.54	688.96	833.75	742.07	1289.38	225.87	478.20	738.95	747.04	441.85	873.76	526.91	612.64	710.28	614.95	749.53	901.93	530.99	610.29	639.37
49	E7_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.05	1.56	0.00	1.54	3.60	1.97	0.00	0.00	6.57	0.00	0.00	10.17	4.77	0.00	2.31	2.45	0.00	0.00	0.00	3.77	0.00
50	E7a_E8a	KnownJunction	0	818.31	450.33	543.47	514.43	678.35	698.21	370.41	469.69	343.11	411.76	399.67	763.51	731.85	1152.34	163.24	387.31	690.29	427.93	137.57	830.13	496.25	753.18	466.35	564.96	602.72	638.13	349.22	470.88	581.30
51	E7a_E9a	NovelJunction	0	5.96	14.06	2.59	0.00	0.00	9.02	4.52	18.51	1.89	1.88	3.23	8.89	4.87	12.03	0.00	6.88	12.47	14.64	8.09	11.25	9.67	12.49	2.51	8.61	17.47	2.19	5.07	4.49	1.72
52	I7	Intron	0	1.30	2.37	0.36	0.68	1.47	2.07	0.91	0.51	4.67	2.80	0.87	1.63	1.20	1.29	5.06	1.53	3.96	1.91	1.85	1.32	4.02	0.58	0.41	1.98	1.24	1.46	0.62	1.20	1.21
53	I7_AR1	ActiveIntronRegion	0	1.00	9.00	0.00	1.06	0.00	0.42	0.00	0.57	6.12	1.86	0.73	1.09	0.36	0.98	2.55	1.53	3.94	4.80	0.99	4.26	4.41	0.56	0.00	0.66	0.44	0.04	2.83	2.46	1.40
54	I7_SR1	SilentIntronRegion	0	0.54	4.86	0.00	1.90	0.00	0.00	0.00	0.94	2.78	2.82	0.62	2.61	0.06	2.29	0.50	0.00	3.40	2.89	0.00	1.41	2.91	0.00	0.00	0.00	0.73	1.54	0.00	0.10	2.46
55	I7_SR2	SilentIntronRegion	0	1.18	2.26	0.28	1.19	1.89	1.82	0.78	0.00	3.62	2.87	0.72	0.88	1.25	1.07	4.46	1.33	2.39	1.42	1.23	1.06	3.54	0.00	0.20	2.97	1.66	1.13	0.00	1.89	0.74
56	I7_SR3	SilentIntronRegion	0	0.71	2.78	0.09	0.77	1.57	3.38	1.72	1.11	5.34	4.41	1.08	2.31	2.39	0.99	7.19	1.45	5.07	2.18	1.88	1.48	6.08	0.74	0.62	1.89	1.15	0.88	0.10	0.96	1.67
57	I7_AR4	ActiveIntronRegion	0	2.79	3.26	0.50	0.00	2.20	5.52	1.96	0.75	9.67	3.83	0.18	4.54	1.28	1.22	3.83	2.69	4.74	1.31	4.55	1.87	6.37	0.36	0.90	3.43	0.86	3.18	2.76	2.13	2.32
58	I7_AR5	ActiveIntronRegion	0	0.66	0.00	0.00	0.00	0.00	1.37	3.72	0.00	5.53	1.44	0.00	1.52	1.30	0.00	0.00	7.59	1.00	0.00	4.87	1.95	7.02	0.00	1.67	0.00	0.00	0.00	0.00	1.63	0.52
59	I7_SR4	SilentIntronRegion	0	1.34	2.11	0.42	0.61	1.43	1.83	0.80	0.48	4.48	2.56	0.91	1.50	1.07	1.36	5.04	1.52	3.99	1.89	1.84	1.24	3.69	0.65	0.40	1.87	1.25	1.53	0.62	1.09	1.14
60	E8_Aa	NovelBoundary	0	2.89	0.00	2.69	0.00	6.78	3.84	2.69	5.28	12.97	1.48	6.45	2.86	3.92	5.43	0.00	7.50	10.69	0.00	0.00	4.30	3.81	0.00	2.22	2.27	3.56	7.60	0.00	6.56	4.82
61	ER8a	ExonRegion	0	680.70	530.15	416.82	498.46	660.02	606.42	322.46	406.14	267.15	399.11	476.59	689.35	622.30	1174.55	144.28	378.97	612.82	477.07	364.84	756.91	449.69	715.82	543.53	639.69	705.43	611.86	460.37	461.30	502.89
62	E8_Da	NovelBoundary	0	2.95	4.46	0.00	0.00	7.37	1.46	0.00	0.00	4.48	3.36	0.00	1.17	0.00	0.93	0.00	0.00	1.28	0.00	8.09	4.13	2.05	0.00	2.17	0.00	1.59	0.00	0.00	0.00	1.82
63	E8a_E9a	KnownJunction	0	636.69	585.58	275.41	441.31	717.11	624.51	397.70	332.44	303.34	510.74	589.35	673.90	590.78	1284.99	254.13	353.65	594.92	671.18	614.80	767.94	429.70	734.61	597.79	652.71	697.96	639.72	589.16	500.22	499.92
64	I8	Intron	0	1.61	2.42	0.68	1.66	1.41	2.94	1.98	0.64	5.02	2.59	0.34	1.67	0.79	2.67	1.90	1.87	3.37	3.06	1.48	1.83	2.39	0.10	0.10	1.49	1.24	0.27	0.21	0.47	1.16
65	I8_SR1	SilentIntronRegion	0	1.44	2.89	0.42	1.26	1.50	2.67	1.97	0.55	5.02	2.60	0.16	1.71	0.87	2.97	1.23	1.14	2.97	2.79	1.43	1.12	2.24	0.13	0.00	1.60	1.28	0.12	0.27	0.61	1.10
66	I8_SR2	SilentIntronRegion	0	1.79	0.95	1.75	3.32	1.19	4.48	2.29	1.09	5.40	2.75	1.09	1.68	0.57	1.89	4.88	4.96	5.25	4.54	1.89	4.94	3.23	0.00	0.54	1.28	1.26	0.93	0.00	0.00	1.40
67	E9_Aa	NovelBoundary	0	2.83	4.85	0.00	10.78	0.00	3.61	2.92	0.00	0.00	5.07	4.65	1.39	3.22	5.74	0.00	6.96	4.41	0.00	8.09	4.13	3.81	1.99	0.00	8.37	3.30	0.00	0.00	0.00	3.17
68	I8_AR1	ActiveIntronRegion	0	6.12	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.42	1.44	0.00	0.53	0.00	0.00	0.00	0.00	1.00	0.00	0.00	0.00	0.88	0.00	0.00	0.00	0.07	0.00	0.00	0.00	1.53
69	ER9a	ExonRegion	0	82.36	93.00	96.75	180.83	253.77	136.27	66.26	41.19	53.07	93.33	116.04	103.92	111.55	175.02	46.83	72.15	114.03	113.39	84.15	135.39	104.15	80.45	101.46	105.44	97.50	101.88	118.20	78.60	102.75
70	E9_Da	KnownBoundary	0	4.90	28.99	2.32	20.49	54.38	55.33	29.18	1.89	69.52	25.21	21.86	33.46	97.99	51.05	104.44	32.44	47.54	27.74	72.83	50.53	45.12	13.03	15.86	75.73	28.34	25.75	9.59	22.87	74.08
71	ER9b	ExonRegion	0	11.33	50.94	1.42	10.94	32.24	31.38	28.39	5.93	62.86	17.56	17.56	19.77	53.54	31.97	68.76	21.11	22.32	23.60	39.09	55.37	33.53	13.61	10.47	90.73	20.54	17.98	19.47	12.25	37.34
72	IG18_AR1	ActiveIntergenicRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.63	0.00