Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	C11orf95	Gene	0	15.28	16.99	19.82	7.67	17.62	28.50	4.51	2.09	12.18	24.33	13.67	27.71	22.94	15.92	19.22	18.88	24.55	38.94	16.05	12.60	14.54	5.32	22.68	36.89	21.68	12.48	39.41	53.53	19.31
2	433688	Transcript	0	8.95	6.51	8.26	2.53	5.10	12.01	1.89	0.75	2.69	9.76	4.15	12.18	7.79	8.21	7.40	7.95	11.82	28.54	4.25	7.15	5.20	2.07	11.72	12.66	7.64	5.05	9.26	25.79	6.17
3	338498	Transcript	0	11.38	0.00	9.37	0.00	13.71	0.00	0.00	0.00	0.00	3.67	1.39	1.17	8.25	1.04	0.00	0.00	1.26	13.87	16.18	0.00	1.48	0.00	6.94	0.00	3.18	8.15	0.00	0.00	6.50
4	IG40_SR4	SilentIntergenicRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.68
5	ER1a	ExonRegion	0	1.78	0.00	1.25	0.00	0.00	2.34	1.29	0.00	0.34	2.64	0.93	3.15	2.37	2.58	5.64	0.80	1.29	13.42	4.98	2.97	1.53	0.24	1.95	2.55	1.92	0.31	0.43	5.38	1.14
6	E1a_E2a	KnownJunction	0	10.20	0.00	3.66	0.00	0.00	11.13	0.00	0.00	0.00	11.54	3.61	13.89	7.80	7.18	8.37	0.00	11.52	33.01	0.00	8.10	1.93	2.24	5.02	8.73	7.61	2.19	2.24	27.99	7.59
7	I1	Intron	0	3.71	1.29	0.62	0.38	0.13	3.73	0.54	0.34	0.78	1.85	0.22	0.90	0.31	0.84	2.25	2.77	5.57	4.57	0.85	1.48	0.27	0.19	0.14	1.20	0.72	0.42	0.83	8.77	0.36
8	I1_SR1	SilentIntronRegion	0	3.10	0.00	0.14	0.00	0.42	2.11	1.20	0.63	0.95	0.61	0.30	0.84	0.00	0.42	1.18	2.42	1.91	2.62	0.27	0.81	0.12	0.31	0.15	0.55	0.61	0.13	0.31	4.44	0.28
9	I1_AR1	ActiveIntronRegion	0	5.11	5.91	1.23	0.00	0.00	3.03	0.00	1.01	0.62	2.91	0.22	0.68	0.48	1.75	2.54	2.15	5.48	5.36	2.34	2.02	0.52	0.00	0.00	2.76	1.05	0.00	0.00	8.67	0.61
10	I1_SR2	SilentIntronRegion	0	3.69	0.79	0.74	0.70	0.00	4.87	0.30	0.00	0.72	2.27	0.18	1.00	0.45	0.84	2.80	3.14	7.72	5.48	0.79	1.73	0.28	0.18	0.18	1.16	0.70	0.70	1.35	11.32	0.33
11	E2_Aa	NovelBoundary	0	0.00	4.17	0.00	0.00	0.00	16.34	0.00	0.00	0.00	1.56	1.23	3.07	0.00	1.02	0.00	3.37	2.59	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.74	0.00	0.00	2.02	0.00
12	ER2a	ExonRegion	0	16.64	5.21	13.42	1.06	5.34	21.42	2.12	0.54	2.28	16.38	3.53	20.44	15.17	16.69	13.75	8.27	17.91	39.33	6.89	11.85	7.96	4.63	22.34	22.48	12.59	8.74	3.84	29.66	8.57
13	E2_Ab	KnownBoundary	0	14.92	9.21	18.44	0.00	7.37	15.46	0.00	0.00	4.72	11.38	6.80	18.46	20.35	11.41	23.12	3.14	15.89	33.65	8.09	22.74	15.40	4.47	35.66	33.74	8.98	12.02	13.02	36.80	7.43
14	ER2b	ExonRegion	0	9.54	3.03	16.72	4.78	6.15	9.23	1.86	0.00	1.43	10.63	1.93	9.79	5.81	5.78	8.57	6.19	11.90	14.84	6.21	10.18	5.47	1.32	21.66	13.17	8.65	6.85	5.08	22.09	4.68
15	E2_Da	NovelBoundary	0	0.00	0.00	1.10	0.00	0.00	0.00	0.00	0.00	1.89	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.21	4.62	0.00	0.00	0.00	0.00	0.00	0.00	1.93	0.00	0.00	3.95	0.00
16	E2a_E3a	KnownJunction	0	8.61	4.17	11.86	0.00	7.37	11.97	2.12	0.00	0.00	5.07	1.61	6.30	3.50	4.94	9.97	7.65	11.01	13.87	0.00	3.89	2.05	0.00	15.42	5.08	8.49	1.67	14.31	20.58	1.49
17	E2a_E4a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.92	0.00	0.00	0.00	2.53	0.00	0.00
18	E2a_E5a	KnownJunction	0	11.38	0.00	9.37	0.00	13.71	0.00	0.00	0.00	0.00	3.67	1.39	1.17	8.25	1.04	0.00	0.00	1.26	13.87	16.18	0.00	1.48	0.00	6.94	0.00	3.18	8.15	0.00	0.00	6.50
19	E3_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.87	0.00	2.15	0.00	0.00	0.92	9.25	0.00	0.00	0.00	0.00	0.00	3.05	0.00	0.00	0.00	10.11	1.32
20	ER3a	ExonRegion	0	8.45	4.01	8.28	1.89	0.60	9.24	1.96	0.79	1.21	7.77	3.46	8.98	4.05	6.60	2.21	9.48	12.15	23.00	4.17	4.77	3.49	0.83	10.55	5.93	4.72	4.09	2.65	24.99	2.64
21	E3_Da	NovelBoundary	0	3.01	4.85	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.17	4.88	0.00	0.00	1.72	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
22	E3a_E4a	KnownJunction	0	12.33	20.75	5.08	0.00	7.07	9.86	2.40	2.24	3.01	9.71	4.27	12.20	4.84	8.38	0.00	17.37	14.47	47.01	0.00	14.97	5.78	2.48	10.74	11.19	3.45	9.74	1.99	38.24	6.40
23	I3	Intron	0	4.47	0.61	0.63	0.00	0.00	2.87	0.00	0.00	0.21	0.55	0.00	0.00	0.00	0.17	0.00	0.47	1.70	6.33	0.00	0.00	0.54	0.00	0.00	0.00	0.54	0.00	0.00	1.24	0.00
24	I3_SR1	SilentIntronRegion	0	4.50	0.62	0.64	0.00	0.00	2.89	0.00	0.00	0.21	0.55	0.00	0.00	0.00	0.17	0.00	0.47	1.71	6.38	0.00	0.00	0.54	0.00	0.00	0.00	0.55	0.00	0.00	1.25	0.00
25	E4_Aa	NovelBoundary	0	8.08	8.63	2.72	0.00	0.00	6.60	2.35	2.04	0.00	0.00	1.30	8.19	0.00	4.03	0.00	7.34	5.54	4.62	0.00	0.00	1.89	0.00	0.00	2.45	3.45	5.62	1.99	10.96	1.58
26	ER4a	ExonRegion	0	4.35	1.58	3.03	0.65	1.58	5.90	1.42	0.46	0.60	3.58	1.66	4.74	2.37	2.80	1.76	3.74	6.11	17.82	1.16	2.29	1.32	1.39	5.77	3.55	1.49	2.92	0.55	13.64	1.89
27	E4_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.56	0.00	0.00	0.00	0.00	6.98	0.00	4.01	0.00	0.00	0.00	0.00	0.00	0.00	2.99	0.00	0.00	0.00	0.00	0.00
28	E4a_E5a	KnownJunction	0	0.00	0.00	2.92	8.84	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.61	0.00	5.03	0.00	0.00	1.35	23.89	0.00	0.00	3.69	0.00	6.50	5.98	0.00	0.00	2.53	4.04	0.00
29	I4_SR1	SilentIntronRegion	0	2.70	4.10	1.80	0.00	0.00	1.03	0.00	0.00	0.48	0.00	0.00	0.00	0.00	0.99	0.00	0.00	5.27	2.32	0.00	0.00	0.00	0.00	0.00	0.00	1.57	0.00	0.00	2.23	0.00
30	E5_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	2.95	0.00	0.00	0.00	2.04	0.00	0.00	0.00	0.89	0.00	0.00	3.62	0.00	0.00	0.00	0.00	0.00	0.00	3.05	0.00	0.00	0.00	8.63	0.00
31	ER5a	ExonRegion	0	5.86	0.00	4.68	0.00	2.66	1.83	0.00	0.00	0.00	4.19	0.52	4.25	1.73	4.11	6.53	1.18	5.01	32.02	9.96	0.00	2.47	0.00	13.32	6.31	1.62	2.41	1.65	5.00	2.33
32	ER5b	ExonRegion	0	18.21	22.84	24.87	10.28	23.91	36.21	5.68	2.76	16.76	31.14	18.32	35.30	30.05	19.65	24.90	24.23	30.53	45.48	21.01	15.47	19.04	6.78	27.25	48.45	28.45	15.77	54.82	67.59	25.78