Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	EFEMP2	Gene	0	53.78	26.64	56.78	29.40	18.54	30.99	15.87	27.02	38.26	51.79	11.85	45.13	17.29	73.82	23.73	61.85	75.75	123.61	21.32	48.24	47.24	38.94	91.53	195.31	163.89	97.13	58.65	21.06	74.26
2	307998	Transcript	0	67.85	34.86	67.04	27.07	19.80	38.34	22.18	36.17	46.17	65.25	16.22	57.33	22.68	91.57	27.16	75.44	98.63	159.38	23.94	55.92	60.97	45.74	118.90	235.95	209.41	125.56	73.04	27.86	94.91
3	IG30_AR2	ActiveIntergenicRegion	0	15.34	1.91	2.07	8.22	0.00	4.53	0.89	2.65	1.14	1.02	0.21	0.54	0.46	2.25	3.99	13.95	5.11	4.25	0.85	0.73	3.49	0.27	0.96	5.40	1.77	0.00	0.32	0.29	0.21
4	IG30_SR2	SilentIntergenicRegion	0	10.39	0.71	0.00	0.00	0.00	2.51	0.00	2.88	1.12	1.32	0.00	0.00	0.00	0.85	5.11	2.64	0.30	3.74	0.00	0.00	0.47	0.55	0.00	4.49	0.00	0.00	0.00	0.00	0.35
5	IG30_AR1	ActiveIntergenicRegion	0	5.36	3.28	0.00	0.00	0.00	0.00	0.00	1.84	0.42	1.44	0.00	0.00	0.00	0.00	0.00	2.53	0.00	5.46	0.00	0.00	0.00	0.00	0.00	2.69	0.00	0.00	0.00	0.00	0.00
6	ER1a	ExonRegion	0	7.74	1.97	21.27	20.84	29.57	6.17	3.45	4.04	4.94	10.36	1.30	7.28	2.92	11.22	1.26	27.97	14.99	33.06	5.45	9.51	13.56	11.22	37.34	25.18	24.94	28.54	15.22	4.93	17.88
7	E1_Da	NovelBoundary	0	3.01	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
8	E1a_E2a	KnownJunction	0	13.04	8.53	19.88	10.35	24.17	5.29	2.57	14.78	4.96	11.10	3.16	10.39	3.22	24.28	0.00	13.92	28.27	32.36	8.09	11.08	7.50	11.72	19.65	26.44	34.36	19.83	14.11	15.64	29.25
9	E2_Aa	NovelBoundary	0	13.51	0.00	1.25	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	7.19	0.00	4.62	0.00	3.89	0.00	4.23	2.41	11.25	0.00	1.89	0.00	0.00	1.25
10	ER2a	ExonRegion	0	39.40	11.55	7.88	19.65	8.02	28.45	12.59	23.03	17.86	49.97	9.16	28.20	11.16	62.35	13.57	60.91	45.93	105.17	13.04	36.23	49.45	30.51	59.80	150.16	131.96	81.19	32.98	10.28	55.72
11	E2a_E3a	KnownJunction	0	74.73	30.25	14.00	0.00	0.00	63.92	40.85	70.07	52.96	109.45	10.79	50.00	27.00	95.49	8.37	139.61	81.62	257.25	24.28	59.54	108.78	59.07	173.41	304.40	317.33	176.33	48.50	22.96	114.85
12	E3_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.05	0.00	0.00	0.00	2.69	0.00	0.00	0.00	2.11	0.00
13	ER3a	ExonRegion	0	69.60	35.40	23.31	0.00	0.00	38.46	21.52	56.74	39.74	63.88	5.51	42.94	23.65	98.94	10.06	82.79	81.41	177.12	20.60	62.06	62.15	50.62	106.95	243.56	239.57	106.23	37.12	7.52	83.16
14	E3_Da	NovelBoundary	0	4.78	0.00	0.00	0.00	0.00	1.96	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.42	8.37	0.00	1.15	4.62	0.00	0.00	5.25	2.48	2.12	11.07	10.80	0.00	0.00	0.00	3.30
15	E3a_E4a	KnownJunction	0	74.09	47.51	23.92	0.00	0.00	13.39	11.39	25.73	32.04	44.82	1.42	39.22	16.37	91.84	8.37	41.92	72.68	120.98	24.28	57.06	41.55	36.95	116.52	176.28	168.78	54.93	40.45	12.45	44.34
16	I3	Intron	0	13.71	0.74	1.13	0.60	0.82	2.08	0.85	2.32	2.69	1.94	0.20	1.71	0.71	3.54	2.33	4.48	6.28	6.97	0.27	0.93	3.84	0.91	1.83	10.32	5.89	2.78	0.00	0.41	0.96
17	I3_AR1	ActiveIntronRegion	0	13.76	0.74	1.13	0.61	0.82	2.09	0.85	2.33	2.70	1.95	0.20	1.72	0.71	3.55	2.34	4.49	6.30	6.99	0.27	0.93	3.85	0.91	1.83	10.35	5.91	2.79	0.00	0.41	0.96
18	E4_Aa	NovelBoundary	0	27.31	0.00	1.12	0.00	0.00	0.00	0.00	1.94	3.38	1.64	0.00	2.95	4.01	4.28	0.00	7.27	7.36	4.62	0.00	4.13	3.53	0.00	7.24	24.88	10.65	0.00	0.00	0.00	1.35
19	ER4a	ExonRegion	0	72.53	32.06	52.73	49.32	17.28	41.14	24.02	33.65	31.52	71.32	10.38	58.45	19.14	106.21	28.71	74.38	102.66	183.43	27.22	57.95	57.44	45.10	112.51	233.27	203.92	113.13	50.56	27.69	90.81
20	E4_Da	NovelBoundary	0	8.73	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.46	0.00	0.00	1.48	1.46	3.04	0.00	0.00	4.05	14.64	0.00	0.00	0.00	0.00	0.00	2.39	3.26	2.19	0.00	2.20	0.00
21	E4a_E5a	KnownJunction	0	100.92	43.63	47.29	37.10	36.11	29.50	22.89	31.50	49.73	70.94	12.31	53.76	30.67	105.84	26.31	76.96	102.03	182.50	24.28	63.68	53.35	62.08	129.48	189.44	211.13	126.12	73.65	42.33	96.86
22	I4	Intron	0	7.68	0.33	2.91	0.73	0.00	3.66	0.00	1.51	1.03	1.18	0.98	1.33	0.27	3.25	0.94	5.01	3.21	5.59	1.31	1.98	1.61	1.85	0.93	5.73	2.93	1.77	0.00	0.83	0.20
23	I4_AR1	ActiveIntronRegion	0	7.71	0.33	2.92	0.74	0.00	3.67	0.00	1.51	1.04	1.19	0.98	1.33	0.27	3.26	0.95	5.03	3.22	5.61	1.31	1.98	1.61	1.85	0.93	5.75	2.94	1.78	0.00	0.84	0.21
24	E5_Aa	NovelBoundary	0	8.26	0.00	2.72	0.00	0.00	1.73	0.00	4.08	0.00	3.60	1.27	3.31	1.82	3.28	8.37	10.94	7.63	4.62	0.00	6.78	1.93	0.00	0.00	7.48	1.67	0.00	0.00	2.07	0.00
25	ER5a	ExonRegion	0	74.93	41.23	68.48	36.68	25.60	31.34	13.31	35.06	37.79	63.20	9.59	66.20	22.31	92.45	27.96	62.67	109.46	182.50	28.04	57.63	55.99	33.08	112.36	187.06	187.56	84.56	63.73	27.83	71.36
26	E5_Da	NovelBoundary	0	2.77	0.00	5.78	0.00	0.00	0.00	0.00	0.00	0.00	2.00	0.00	0.00	0.00	1.02	0.00	3.06	4.48	0.00	0.00	0.00	1.97	0.00	0.00	0.00	1.52	0.00	0.00	0.00	2.05
27	E5a_E6a	KnownJunction	1	110.24	43.24	93.18	30.20	5.89	43.97	9.61	36.53	71.20	78.05	19.14	98.13	27.74	109.48	34.48	86.52	151.58	244.53	24.05	60.87	57.72	45.36	127.41	253.80	210.04	126.12	83.44	32.13	100.86
28	I5	Intron	0	4.47	0.00	0.32	0.00	0.00	0.26	0.00	0.70	0.00	0.27	0.23	0.82	0.00	1.03	0.00	3.16	1.42	2.92	0.00	0.00	2.16	0.34	0.00	1.22	0.81	0.30	0.00	0.00	0.00
29	I5_AR1	ActiveIntronRegion	0	4.50	0.00	0.32	0.00	0.00	0.26	0.00	0.70	0.00	0.28	0.23	0.82	0.00	1.04	0.00	3.18	1.43	2.94	0.00	0.00	2.18	0.34	0.00	1.23	0.82	0.30	0.00	0.00	0.00
30	E6_Aa	NovelBoundary	0	3.01	0.00	2.54	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.01	0.00	0.00	0.00	5.70	2.09	0.00	0.00	1.93	0.00	0.00	0.00	0.00
31	ER6a	ExonRegion	0	60.46	33.78	78.87	18.81	24.95	39.83	22.78	28.26	34.22	55.17	16.47	75.24	28.22	87.79	19.58	70.23	117.79	149.50	17.99	49.85	56.70	36.46	120.09	179.06	137.25	114.43	62.91	31.05	98.75
32	E6a_E7a	KnownJunction	0	60.93	67.28	85.18	59.75	26.23	50.38	25.92	46.08	41.45	110.21	27.33	78.94	37.23	107.68	35.08	74.66	142.06	148.59	24.28	58.96	106.41	37.10	174.44	269.53	272.09	154.23	102.13	35.77	110.66
33	E7_Aa	NovelBoundary	0	2.77	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.63	1.43	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
34	ER7a	ExonRegion	0	80.49	38.16	106.62	56.12	23.87	40.12	18.01	48.51	56.01	82.23	25.19	92.45	27.06	130.93	23.34	92.41	119.27	196.07	31.34	58.74	87.40	64.97	144.28	323.78	278.42	164.14	109.11	40.40	121.91
35	E7_Da	NovelBoundary	0	0.00	0.00	1.27	0.00	0.00	0.00	0.00	2.14	0.00	2.04	0.00	1.87	0.00	3.63	0.00	0.00	2.27	4.62	0.00	0.00	0.00	0.00	0.00	2.69	0.00	0.00	0.00	0.00	0.00
36	E7a_E8a	KnownJunction	0	67.07	45.86	98.61	49.39	33.31	40.09	34.56	44.84	49.58	61.04	31.76	71.11	24.55	109.05	32.49	82.16	122.70	140.50	32.37	44.41	59.76	63.35	146.91	334.13	232.39	178.44	145.91	39.27	113.50
37	E8_Aa	NovelBoundary	0	2.30	0.00	1.15	0.00	7.37	7.48	0.00	0.00	0.00	6.67	1.30	3.76	0.00	1.97	0.00	0.00	5.31	13.87	0.00	12.07	3.13	0.00	0.00	3.05	3.22	0.00	0.00	0.00	1.58
38	ER8a	ExonRegion	0	65.73	29.76	123.80	52.77	27.44	53.80	26.09	39.51	54.99	68.46	19.44	70.56	28.13	107.95	28.28	76.28	122.34	179.56	24.14	58.98	74.54	57.93	140.49	282.30	193.02	179.19	81.87	39.26	110.28
39	E8_Da	NovelBoundary	0	0.00	0.00	2.59	0.00	0.00	0.00	0.00	0.00	1.89	2.04	0.00	1.72	0.00	1.24	0.00	3.52	2.75	0.00	0.00	0.00	1.93	0.00	0.00	2.45	0.00	0.00	0.00	0.00	0.00
40	E8a_E9a	KnownJunction	0	63.41	33.64	143.68	0.00	40.23	42.32	30.55	36.03	72.99	76.38	40.62	78.19	33.09	120.49	59.40	87.59	144.51	207.54	40.46	47.80	84.15	64.61	154.05	354.23	295.92	224.87	119.47	51.31	156.98
41	I8_AR1	ActiveIntronRegion	0	0.00	2.27	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.63	0.75	0.00	0.00	0.66	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.52	0.00
42	E9_Aa	NovelBoundary	0	0.00	0.00	3.66	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.46	3.41	16.14	0.00	1.17	0.00	0.00	0.00	0.00	0.00	3.74	5.44	0.00	0.00	0.00	0.00	1.32
43	ER9a	ExonRegion	0	75.22	45.52	88.47	33.80	27.89	49.80	32.44	37.87	61.88	72.55	21.87	79.20	26.70	102.65	35.76	105.73	144.16	178.84	38.24	87.82	65.65	60.40	135.86	273.89	243.66	175.89	105.22	31.00	131.08
44	E9_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.50	0.00	0.00	0.00	2.43	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.53	0.00	0.00
45	E9a_E10a	KnownJunction	0	96.09	41.20	97.99	20.06	6.34	68.91	56.47	40.21	89.83	93.27	23.19	82.08	26.30	105.27	68.17	95.47	138.77	204.72	32.37	89.73	80.14	47.26	154.59	344.42	287.43	166.25	87.62	46.55	134.46
46	E10_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.75	0.00	0.00	0.00	0.00	0.00	0.00	1.06	4.62	0.00	0.00	0.00	0.00	5.91	0.00	0.00	0.00	0.00	0.00	0.00
47	ER10a	ExonRegion	0	83.39	36.28	93.10	36.56	19.16	44.93	22.16	41.17	52.43	63.34	22.36	59.72	25.95	107.05	46.15	83.54	109.04	151.73	29.28	79.67	63.90	51.76	123.23	297.20	251.78	158.83	100.01	30.82	120.17
48	E10_Da	NovelBoundary	0	0.00	0.00	2.57	0.00	0.00	0.00	2.69	2.19	1.67	0.00	0.00	4.31	1.72	0.00	0.00	0.00	1.40	0.00	0.00	0.00	0.00	2.19	4.24	3.05	5.72	1.93	2.34	0.00	1.32
49	E10a_E11a	KnownJunction	0	98.21	44.50	85.28	19.41	28.00	54.25	25.80	50.56	74.24	76.90	22.71	41.26	24.74	103.43	41.46	107.71	85.06	200.86	16.18	88.82	66.82	60.38	149.13	352.13	353.81	152.65	116.99	24.44	147.08
50	I10	Intron	0	0.73	1.31	1.93	0.00	2.98	1.68	0.96	0.62	0.65	1.66	0.40	1.34	0.53	1.99	1.68	2.48	2.63	5.97	1.08	2.62	1.26	1.47	1.84	5.98	2.81	1.39	1.37	0.99	0.81
51	I10_AR1	ActiveIntronRegion	0	1.52	0.06	1.28	0.00	0.98	1.05	0.00	0.00	0.23	0.55	0.72	0.07	0.00	1.66	2.01	1.00	1.27	2.85	0.00	0.61	0.94	0.40	0.73	5.26	2.46	0.32	1.02	0.99	1.06
52	I10_AR2	ActiveIntronRegion	0	0.92	5.87	1.38	0.00	0.27	2.06	0.00	0.00	0.24	3.51	0.00	2.36	0.79	2.19	3.80	0.00	1.34	6.92	1.29	3.31	1.07	2.09	0.00	6.95	3.11	1.80	0.36	0.00	0.29
53	I10_AR3	ActiveIntronRegion	0	0.25	1.44	2.37	0.00	4.49	1.99	1.64	1.07	0.94	2.07	0.28	1.95	0.80	2.17	1.21	3.67	3.59	7.67	1.68	3.69	1.47	2.00	2.74	6.29	2.99	1.95	1.70	1.14	0.74
54	E11_Aa	NovelBoundary	0	2.30	0.00	1.54	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.50	0.00	3.82	3.58	0.00	0.00	0.00	0.00	0.00	0.00	2.39	3.86	0.00	0.00	0.00	1.42
55	ER11a	ExonRegion	0	36.71	20.64	34.37	17.56	11.81	19.15	8.70	15.38	39.15	37.64	6.85	20.66	10.17	42.59	21.51	40.72	34.90	70.15	16.74	33.97	27.35	30.64	58.34	154.61	122.15	50.87	42.80	11.48	43.06