Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	ZFPL1	Gene	0	115.90	58.07	131.78	147.94	216.21	61.76	68.45	58.07	91.43	85.79	43.20	87.59	157.88	70.01	55.94	87.38	124.29	164.56	45.09	94.95	46.96	167.58	157.74	101.62	80.89	128.53	45.31	158.11	180.66
2	294258	Transcript	0	123.78	58.48	151.40	144.75	197.22	56.93	62.02	54.70	86.79	90.99	45.04	79.95	142.75	65.78	50.31	71.74	108.50	171.68	48.18	89.65	47.85	159.28	157.61	104.82	83.16	92.79	34.27	101.22	130.19
3	453524	Transcript	0	22.44	9.25	11.82	18.20	11.43	9.61	5.65	4.92	7.17	6.10	3.44	4.38	1.24	11.83	3.90	20.69	22.39	20.47	7.08	22.42	3.64	5.55	1.81	11.41	8.17	7.93	1.02	8.42	6.92
4	IG42	Intergenic	0	0.00	0.00	0.00	0.00	7.12	1.00	0.00	0.00	0.00	0.00	0.00	0.00	0.95	0.00	0.00	0.00	0.00	2.81	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
5	IG42_AR1	ActiveIntergenicRegion	0	0.00	0.00	0.00	0.00	9.25	1.31	0.00	0.00	0.00	0.00	0.00	0.00	0.25	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
6	ER1a	ExonRegion	0	15.11	15.11	28.33	114.81	188.30	14.09	24.89	10.68	14.77	14.22	7.44	15.83	25.20	10.52	10.08	26.07	28.15	37.80	21.50	11.24	9.20	27.58	33.63	10.00	15.65	42.36	32.05	96.34	39.66
7	ER1b	ExonRegion	1	86.04	51.10	179.52	390.67	672.80	51.03	78.72	56.68	91.46	74.04	59.92	120.66	204.76	57.75	39.69	92.23	165.74	130.24	40.37	57.88	40.46	155.92	179.48	58.96	79.90	286.58	112.95	356.76	374.00
8	E1_Da	NovelBoundary	0	2.95	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	8.37	0.00	0.00	4.62	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.64
9	E1a_E2a	KnownJunction	0	72.43	17.84	39.14	47.45	75.16	37.06	37.19	71.76	53.41	27.20	22.11	51.78	163.49	51.16	25.91	15.91	58.12	78.98	32.37	37.13	16.28	88.14	70.97	56.59	70.85	77.07	19.83	104.51	167.94
10	I1	Intron	0	8.76	4.21	6.01	10.55	37.52	5.62	6.92	3.01	5.22	4.01	2.53	6.05	12.82	5.03	3.45	7.48	8.78	7.40	2.09	6.13	6.76	7.96	5.32	4.57	6.78	5.91	2.10	13.86	6.13
11	I1_AR1	ActiveIntronRegion	0	8.82	4.24	6.05	10.62	37.76	5.66	6.96	3.03	5.26	4.04	2.55	6.09	12.90	5.06	3.47	7.53	8.84	7.45	2.10	6.17	6.81	8.01	5.35	4.60	6.82	5.95	2.11	13.94	6.17
12	E2_Aa	NovelBoundary	1	32.85	8.92	4.36	9.92	6.34	20.95	0.00	13.54	7.25	5.71	5.95	13.76	34.36	19.65	9.97	17.90	27.84	18.49	0.00	11.66	18.93	2.24	4.92	13.64	15.23	0.00	11.88	13.97	12.74
13	ER2a	ExonRegion	0	155.38	90.60	49.03	48.06	78.21	108.67	113.32	112.99	165.72	114.96	65.95	138.97	244.90	109.67	68.58	147.36	188.96	231.56	79.98	130.98	88.35	288.57	196.46	148.59	138.84	222.36	64.34	242.94	294.11
14	E2_Da	NovelBoundary	1	20.17	0.00	6.43	19.84	0.00	5.60	37.59	0.00	10.81	12.94	1.61	5.81	7.20	9.66	8.17	14.23	12.67	18.49	16.18	0.00	0.00	6.90	4.04	7.78	3.41	19.31	0.00	4.27	9.54
15	E2a_E3a	KnownJunction	0	110.60	80.95	70.06	107.85	164.02	125.35	191.38	86.94	189.23	288.61	130.75	244.00	382.80	137.35	57.40	190.71	376.38	351.51	32.37	116.36	90.45	213.53	396.85	134.70	169.16	579.04	105.71	641.31	639.31
16	I2	Intron	0	1.18	1.53	1.84	0.00	2.69	0.38	2.22	0.00	0.93	0.80	0.66	0.68	0.72	1.75	1.51	3.42	0.82	4.78	0.88	1.52	1.57	0.50	1.99	0.59	1.58	0.43	0.00	2.25	0.74
17	I2_AR1	ActiveIntronRegion	0	1.19	1.54	1.86	0.00	2.72	0.38	2.25	0.00	0.94	0.80	0.66	0.69	0.72	1.76	1.53	3.46	0.82	4.83	0.89	1.54	1.59	0.50	2.02	0.60	1.59	0.44	0.00	2.27	0.75
18	E3_Aa	NovelBoundary	0	2.36	0.00	0.00	0.00	0.00	0.00	0.00	4.23	1.19	3.83	0.00	1.69	0.00	3.23	8.37	2.75	9.93	4.62	0.00	0.00	1.76	0.00	1.87	2.57	3.41	3.60	0.00	0.00	3.50
19	ER3a	ExonRegion	1	142.77	76.61	153.95	100.35	243.47	92.73	90.40	93.98	105.59	127.75	68.55	167.20	282.99	112.51	41.00	108.87	211.77	231.32	53.95	136.39	56.37	226.34	226.73	163.16	134.69	270.69	81.52	375.69	421.25
20	E3_Da	KnownBoundary	0	29.55	19.39	25.84	10.78	21.66	9.05	5.84	4.88	14.04	5.43	10.95	13.86	2.80	13.69	25.51	35.88	44.39	41.61	0.00	38.46	7.58	13.52	2.02	18.96	3.71	13.09	0.00	14.96	8.45
21	E3a_E4a	KnownJunction	0	87.65	90.55	330.17	156.59	331.59	55.59	64.54	42.25	101.77	103.70	64.72	94.00	150.15	87.98	36.28	45.13	92.87	157.84	72.83	125.29	47.89	187.95	140.07	132.85	104.41	80.46	42.99	128.73	167.41
22	E3a_E5a	NovelJunction	0	0.00	0.00	0.00	10.78	0.00	0.00	0.00	0.00	0.00	2.04	0.00	1.87	0.00	1.33	0.00	3.29	0.00	0.00	0.00	8.27	0.00	2.48	0.00	0.00	0.00	0.00	4.12	0.00	3.60
23	ER3b	ExonRegion	0	22.44	9.25	11.82	18.20	11.43	9.61	5.65	4.92	7.17	6.10	3.44	4.38	1.24	11.83	3.90	20.69	22.39	20.47	7.08	22.42	3.64	5.55	1.81	11.41	8.17	7.93	1.02	8.42	6.92
24	E3_Db	NovelBoundary	0	51.08	12.89	14.23	30.63	25.35	14.08	4.69	4.58	9.47	9.47	1.61	10.78	2.87	29.69	16.54	15.45	63.09	97.09	24.28	41.93	3.37	2.48	2.51	21.53	5.34	5.88	0.00	1.75	8.78
25	I3	Intron	0	59.12	20.64	16.14	20.42	19.32	18.27	12.44	11.65	22.14	19.96	8.29	27.03	5.91	32.63	29.33	45.07	122.19	50.92	13.82	35.51	11.43	6.28	2.10	34.94	23.97	10.94	1.55	13.15	13.93
26	I3_AR1	ActiveIntronRegion	0	61.19	21.49	16.93	22.35	21.05	19.35	13.06	12.13	22.69	21.40	9.11	28.03	6.47	34.82	30.61	47.20	125.42	53.35	16.11	37.56	11.55	6.75	2.42	36.55	25.46	11.71	1.94	13.68	15.43
27	I3_SR1	SilentIntronRegion	0	66.65	25.33	14.82	16.67	14.40	20.39	12.68	12.95	24.26	18.49	7.66	29.89	5.02	31.25	29.09	44.78	142.99	51.07	4.99	35.82	14.00	5.36	0.97	36.24	19.21	11.51	0.00	14.27	11.22
28	I3_AR2	ActiveIntronRegion	0	27.64	5.08	10.50	7.02	9.76	4.31	6.02	5.01	13.68	7.93	1.00	12.93	1.70	13.06	17.25	24.87	59.44	27.07	4.47	14.88	6.54	2.98	0.63	17.30	16.81	2.45	0.00	6.30	3.17
29	E4_Aa	NovelBoundary	0	46.48	19.68	16.42	0.00	12.97	7.83	10.53	11.60	8.16	16.38	10.79	19.67	5.51	26.81	32.89	33.43	97.89	18.49	8.09	33.00	5.74	4.91	2.51	53.36	5.04	7.17	0.00	6.34	0.00
30	ER4a	ExonRegion	0	152.45	78.48	193.53	320.97	418.81	81.34	89.76	64.82	97.42	126.76	61.06	110.00	185.26	101.47	63.25	101.99	180.68	236.28	59.84	123.32	69.28	219.39	205.42	145.73	115.97	129.85	43.53	150.27	188.64
31	E4_Da	NovelBoundary	0	0.00	4.85	1.52	0.00	0.00	3.68	0.00	2.14	1.16	8.03	0.00	0.00	1.97	4.17	0.00	0.00	4.46	0.00	0.00	4.13	0.00	0.00	0.00	0.00	0.00	3.86	0.00	0.00	1.42
32	E4a_E5a	KnownJunction	0	153.78	92.01	129.96	125.32	110.82	49.38	49.49	80.62	64.56	103.70	46.91	79.61	160.65	72.50	25.11	69.00	128.73	178.26	56.65	86.59	44.32	170.50	145.24	87.93	91.34	106.60	35.88	76.74	144.60
33	I4	Intron	0	4.92	0.00	0.00	0.00	0.00	0.63	0.93	0.85	0.52	0.66	0.00	0.57	0.60	0.62	0.00	1.14	0.69	2.95	0.00	1.27	0.66	0.00	0.00	0.99	0.66	0.00	0.00	0.00	0.00
34	I4_SR1	SilentIntronRegion	0	5.01	0.00	0.00	0.00	0.00	0.64	0.94	0.86	0.53	0.68	0.00	0.58	0.61	0.63	0.00	1.16	0.70	3.00	0.00	1.29	0.67	0.00	0.00	1.01	0.67	0.00	0.00	0.00	0.00
35	E5_Aa	NovelBoundary	0	2.42	0.00	2.79	0.00	0.00	1.65	0.00	4.53	0.00	0.00	0.00	4.16	0.00	1.02	0.00	3.60	5.94	9.25	0.00	3.31	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.58
36	ER5a	ExonRegion	0	163.46	75.69	140.31	129.92	150.40	70.30	68.07	64.41	116.82	121.63	62.78	93.66	157.82	79.41	52.71	88.68	134.57	226.67	44.58	90.40	64.68	197.59	177.26	119.52	113.47	109.84	37.63	103.50	135.06
37	E5_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	1.96	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.13	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.38	0.00	0.00	0.00
38	E5a_E6a	KnownJunction	0	162.86	40.72	158.21	104.83	204.55	78.46	90.51	47.03	119.22	122.83	69.37	100.57	167.37	78.15	51.03	60.59	135.89	289.35	40.46	121.90	80.46	168.51	200.00	178.97	140.48	99.35	41.94	67.49	145.89
39	ER6a	ExonRegion	0	139.44	58.26	184.20	129.59	188.65	57.12	66.40	68.97	89.96	91.17	40.93	92.06	179.62	71.96	66.60	89.56	121.39	168.39	56.96	87.25	52.97	164.48	208.53	109.99	85.32	101.05	33.95	106.38	158.84
40	E6_Da	NovelBoundary	0	0.00	0.00	1.22	0.00	0.00	0.00	0.00	0.00	1.55	1.88	2.97	0.00	3.95	2.02	0.00	3.82	4.14	0.00	0.00	0.00	2.05	0.00	0.00	3.05	0.00	0.00	0.00	0.00	0.00
41	E6a_E7a	KnownJunction	0	159.56	62.73	165.31	189.16	216.34	72.90	63.57	71.96	141.12	103.02	60.90	123.58	209.89	71.50	77.14	97.77	133.19	182.50	72.83	61.53	66.66	188.25	237.33	149.42	91.15	138.74	39.11	136.01	176.62
42	I6	Intron	0	5.45	0.00	2.12	1.52	5.17	2.33	0.85	0.78	1.31	0.92	1.26	0.79	0.82	1.43	3.11	1.05	3.16	1.70	0.00	3.34	0.60	0.00	0.00	2.28	1.81	0.33	0.00	0.69	0.99
43	I6_SR1	SilentIntronRegion	0	3.27	0.00	0.48	0.00	0.00	0.26	0.00	0.00	0.80	0.00	0.85	0.00	0.00	0.00	0.00	0.48	1.00	0.65	0.00	2.01	0.00	0.00	0.00	5.12	0.20	0.00	0.00	0.47	0.00
44	I6_SR2	SilentIntronRegion	0	6.82	0.00	3.11	2.45	8.32	3.41	1.38	0.35	1.93	1.48	1.76	1.26	0.61	1.72	1.47	1.56	3.83	2.44	0.00	3.07	0.96	0.00	0.00	2.15	2.00	0.54	0.00	0.45	1.41
45	I6_AR1	ActiveIntronRegion	0	7.14	0.00	1.87	0.00	0.83	2.06	0.00	3.68	0.94	0.00	1.59	0.00	2.60	1.81	16.80	0.00	6.01	0.00	0.00	9.37	0.00	0.00	0.00	4.30	4.29	0.00	0.00	0.00	1.34
46	I6_SR3	SilentIntronRegion	0	2.62	0.00	0.39	0.00	0.00	0.40	0.00	1.97	0.00	0.00	0.00	0.00	1.57	1.34	7.44	0.00	2.23	0.00	0.00	3.97	0.00	0.00	0.00	1.19	1.80	0.00	0.00	1.43	0.35
47	E7_Aa	NovelBoundary	0	2.95	0.00	0.00	0.00	0.00	1.88	0.00	0.00	0.00	1.88	2.97	0.00	0.00	3.79	0.00	0.00	1.08	14.38	0.00	0.00	1.93	1.85	0.00	3.05	0.00	0.00	0.00	2.11	0.00
48	ER7a	ExonRegion	0	130.86	49.36	166.16	134.85	158.27	62.68	67.89	57.56	105.13	99.79	44.41	93.49	156.34	67.37	65.17	75.88	106.73	188.43	45.10	101.54	46.48	161.51	166.38	92.55	84.85	95.31	32.80	99.89	136.33
49	E7_Da	NovelBoundary	0	2.77	0.00	1.54	0.00	0.00	0.00	0.00	2.44	1.55	0.00	0.00	0.00	0.00	1.99	26.11	0.00	2.63	0.00	0.00	3.89	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
50	E7a_E8a	KnownJunction	0	98.27	29.86	60.99	106.34	100.51	33.73	41.08	50.76	22.78	50.49	10.50	23.04	64.80	28.89	40.86	56.00	50.11	92.47	24.28	82.12	10.99	123.29	98.50	37.27	21.94	43.34	6.56	44.53	36.05
51	I7_SR1	SilentIntronRegion	0	5.69	1.63	1.97	0.00	2.88	0.81	7.13	1.09	0.66	0.85	0.35	2.37	0.00	2.27	4.34	5.44	5.72	4.07	1.88	0.81	1.26	1.59	0.53	0.63	0.00	1.39	0.00	0.48	0.99
52	I7_AR1	ActiveIntronRegion	0	0.00	2.31	0.00	0.00	0.00	5.92	0.00	2.64	0.81	1.04	0.00	0.00	0.00	0.00	0.00	3.07	0.00	2.77	0.00	0.00	0.00	0.00	0.00	1.55	0.00	0.00	0.00	2.34	0.00
53	E8_Aa	NovelBoundary	0	3.01	0.00	0.00	0.00	0.00	1.57	0.00	2.09	0.00	0.00	0.00	0.00	1.18	0.00	0.00	3.60	4.55	9.25	0.00	7.28	1.76	2.48	0.00	0.00	1.59	0.00	0.00	0.00	0.00
54	ER8a	ExonRegion	0	98.14	50.52	108.25	79.82	101.18	50.70	56.03	42.59	81.12	63.59	26.44	53.60	113.10	53.86	65.14	78.54	81.17	130.49	35.01	94.95	33.42	143.06	121.34	88.75	50.21	73.78	30.54	103.52	103.00