Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	TMX2	Gene	0	347.50	318.04	318.16	527.30	505.63	374.78	312.61	578.08	276.78	374.70	322.64	404.51	606.06	318.89	195.53	249.24	294.02	379.14	277.97	581.45	332.97	387.97	398.77	392.17	322.98	233.25	318.10	380.62	415.72
2	278422	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
3	378312	Transcript	0	68.48	22.49	8.67	0.00	63.37	56.21	165.75	141.88	37.94	156.91	78.01	129.97	291.63	31.71	8.37	30.37	56.27	67.04	72.83	64.01	36.90	63.06	188.63	30.51	28.38	323.01	239.79	125.54	125.75
4	319399	Transcript	0	0.00	0.00	273.22	0.00	0.00	0.00	0.00	0.00	32.37	0.00	0.00	133.85	150.75	70.06	0.00	0.00	180.50	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	110.99
5	IG29_AR1	ActiveIntergenicRegion	0	11.62	0.00	0.00	33.06	14.20	5.79	7.65	20.18	3.80	0.61	0.50	2.17	1.28	0.00	13.75	2.20	0.00	6.18	2.69	5.90	1.82	5.30	5.98	0.91	1.76	3.31	4.63	1.36	1.06
6	IG29_AR2	ActiveIntergenicRegion	0	0.00	0.00	0.22	3.97	0.00	0.00	2.02	1.44	0.00	1.38	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.14	0.00	0.00	0.00	3.10	0.00	0.00	1.34	0.00	3.62	0.00	0.00
7	ER1a	ExonRegion	0	50.76	22.80	48.23	291.77	605.96	37.03	38.94	45.70	11.50	37.88	20.92	79.61	70.12	31.49	11.65	57.19	48.86	107.53	40.01	43.62	31.07	59.89	74.50	21.55	18.72	37.94	36.30	60.90	55.86
8	E1_Ab	KnownBoundary	0	201.14	85.61	138.55	1107.15	2138.80	133.86	153.45	182.29	38.98	130.50	75.32	250.75	205.68	104.29	49.03	219.70	153.92	410.72	153.76	126.94	105.01	214.94	291.80	86.73	70.96	119.56	118.18	192.08	162.43
9	ER1b	ExonRegion	0	246.15	87.02	212.02	784.63	738.75	189.69	170.26	315.29	66.90	222.30	132.50	258.43	362.49	158.89	46.26	185.13	245.44	237.23	100.22	307.17	162.80	339.65	256.92	121.30	123.05	186.17	125.80	254.88	306.73
10	E1_Da	NovelBoundary	0	10.79	0.00	0.00	0.00	0.00	5.64	0.00	11.40	4.66	10.99	0.00	1.87	2.67	2.39	0.00	3.37	6.10	10.02	0.00	4.13	11.71	2.48	0.00	0.00	0.00	6.57	0.00	0.00	0.00
11	E1a_E2a	KnownJunction	0	560.42	406.32	73.18	223.03	149.43	899.22	581.70	896.48	265.52	660.42	390.69	498.58	911.39	404.34	179.19	564.41	382.00	804.10	380.35	1046.56	803.57	731.59	461.77	382.58	515.54	403.65	146.61	548.79	741.71
12	I1	Intron	0	3.95	0.35	0.91	0.00	1.06	2.24	0.44	1.20	0.49	3.60	0.90	1.74	0.14	2.16	0.60	1.88	2.11	2.75	1.39	0.90	1.39	0.98	0.39	1.17	0.93	1.53	0.20	0.88	0.36
13	I1_SR1	SilentIntronRegion	0	3.96	0.35	0.91	0.00	1.06	2.24	0.44	1.20	0.49	3.61	0.91	1.75	0.14	2.16	0.60	1.89	2.11	2.76	1.39	0.90	1.40	0.98	0.39	1.17	0.93	1.54	0.20	0.89	0.36
14	I1	Intron	0	2.14	0.00	0.00	0.00	0.00	1.37	0.50	0.92	0.56	1.08	0.30	1.54	0.00	1.36	1.15	0.62	2.24	0.96	1.60	0.00	1.43	0.45	0.00	0.54	1.07	1.57	0.92	1.22	0.00
15	I1_SR1	SilentIntronRegion	0	2.10	0.00	0.00	0.00	0.00	0.34	0.73	0.88	0.41	0.33	0.26	0.63	0.00	0.69	0.92	0.00	1.60	0.21	0.84	0.00	1.94	0.21	0.00	0.78	0.35	0.57	1.33	1.00	0.00
16	I1_AR1	ActiveIntronRegion	0	2.28	0.00	0.00	0.00	0.00	3.69	0.00	1.02	0.91	2.77	0.38	3.59	0.00	2.85	1.69	2.01	3.69	2.64	3.30	0.00	0.32	1.00	0.00	0.00	2.70	3.82	0.00	1.73	0.00
17	E2_Aa	NovelBoundary	0	2.95	4.75	0.00	0.00	0.00	1.96	0.00	0.00	3.11	8.95	7.43	2.92	1.40	3.97	0.00	0.00	8.13	0.00	0.00	0.00	5.29	0.00	1.87	0.00	3.60	4.03	0.00	5.98	0.00
18	ER2a	ExonRegion	0	457.05	308.40	87.58	145.53	140.14	774.80	510.51	786.68	209.49	640.77	421.96	579.06	894.66	355.77	139.92	475.61	430.23	572.59	298.33	809.24	613.63	467.86	611.99	347.36	425.89	481.85	235.94	522.41	649.57
19	E2_Da	NovelBoundary	0	52.32	27.92	6.48	0.00	0.00	14.58	11.16	16.92	12.94	22.53	6.33	14.31	7.07	23.04	16.54	26.47	44.05	28.51	40.46	22.82	10.75	4.33	0.00	6.10	12.46	9.74	0.00	6.87	3.90
20	E2a_E3a	KnownJunction	1	175.54	170.15	89.97	177.30	96.97	172.62	158.20	234.99	86.79	288.97	321.50	443.46	348.03	184.45	64.58	126.68	335.19	97.86	89.02	314.34	123.06	153.44	399.27	217.13	168.06	174.79	225.23	326.52	350.17
21	E2a_E4a	KnownJunction	0	68.48	22.49	8.67	0.00	63.37	56.21	165.75	141.88	37.94	156.91	78.01	129.97	291.63	31.71	8.37	30.37	56.27	67.04	72.83	64.01	36.90	63.06	188.63	30.51	28.38	323.01	239.79	125.54	125.75
22	E2a_E5a	NovelJunction	0	2.42	3.78	0.00	0.00	0.00	0.00	2.40	0.00	0.00	1.96	0.00	1.54	0.00	1.13	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.41	3.05	0.00	0.00	0.00	0.00	1.42
23	E2a_E7a	NovelJunction	0	2.89	0.00	1.07	0.00	5.89	0.00	2.92	2.39	0.00	1.52	0.00	0.00	4.78	1.06	0.00	0.00	1.40	4.62	8.09	0.00	0.00	0.00	0.00	0.00	1.93	14.76	0.00	0.00	6.97
24	I2	Intron	0	42.56	16.45	6.64	13.49	5.10	29.03	7.58	19.24	11.37	17.20	9.20	9.16	7.04	21.76	12.12	23.65	28.08	26.78	18.70	58.31	20.27	12.06	4.16	17.54	17.03	9.20	2.30	14.65	7.14
25	I2_AR1	ActiveIntronRegion	0	42.91	16.59	6.70	13.60	5.15	29.27	7.65	19.40	11.47	17.34	9.28	9.24	7.10	21.93	12.22	23.84	28.31	26.99	18.85	58.78	20.44	12.16	4.19	17.68	17.16	9.27	2.32	14.77	7.20
26	E3_Aa	NovelBoundary	0	78.75	49.74	21.03	50.04	35.37	49.34	26.55	37.13	23.11	55.48	32.96	23.82	18.06	79.12	50.43	68.47	87.16	60.11	40.46	137.61	32.81	54.16	23.69	78.96	43.72	23.77	12.82	35.09	29.68
27	ER3a	ExonRegion	0	260.73	182.86	405.30	711.57	799.10	321.65	228.54	379.91	125.45	331.56	299.20	402.77	493.48	298.19	77.03	177.88	334.08	254.70	139.59	601.09	266.30	244.10	384.45	300.42	279.47	189.34	246.37	384.52	410.73
28	E3_Da	NovelBoundary	0	17.11	16.68	11.91	8.84	6.63	31.23	8.30	6.57	22.66	8.71	10.57	14.67	1.31	24.42	16.54	36.49	28.00	56.64	16.18	25.72	23.38	4.52	0.00	13.64	17.84	4.38	0.00	6.43	1.22
29	E3a_E4a	KnownJunction	0	395.38	355.23	666.90	3044.06	3569.04	862.46	585.59	838.11	279.92	697.21	514.06	522.52	1063.82	399.31	153.68	480.72	368.16	727.43	508.48	838.24	738.31	372.80	620.99	454.18	501.07	548.01	349.27	970.70	888.56
30	E3a_E5a	NovelJunction	0	2.48	0.00	1.32	0.00	0.00	0.00	0.00	10.80	0.00	2.04	0.00	1.20	0.00	0.00	0.00	2.75	0.00	13.87	8.09	0.00	0.00	4.72	2.51	2.69	1.70	0.00	0.00	0.00	0.00
31	I3	Intron	0	23.67	12.41	3.26	11.64	7.14	20.54	6.55	7.48	10.56	13.37	7.35	9.22	5.99	17.92	11.81	26.21	38.07	30.14	27.50	37.24	15.29	2.05	1.47	14.32	12.06	3.32	2.38	9.00	5.43
32	I3_SR1	SilentIntronRegion	0	23.95	15.60	4.03	18.89	7.76	22.08	7.03	8.85	12.24	15.68	9.48	9.74	7.14	18.94	12.82	31.59	47.39	32.02	34.03	41.64	17.63	2.95	2.36	16.75	14.16	3.42	1.41	11.69	8.10
33	I3_AR2	ActiveIntronRegion	0	28.00	11.08	2.90	5.41	7.61	22.93	6.88	7.38	10.45	13.24	6.29	10.46	5.51	20.29	13.04	24.90	34.45	33.67	25.15	39.46	15.36	1.40	0.70	14.22	11.65	3.89	4.03	7.60	3.37
34	E4_Aa	NovelBoundary	0	38.40	32.58	9.64	10.78	0.00	64.88	20.25	16.22	12.00	33.59	5.50	22.53	10.92	23.71	36.08	48.65	64.62	47.01	72.83	23.32	27.76	0.00	4.38	14.65	22.01	3.99	0.00	28.53	14.20
35	ER4a	ExonRegion	0	400.30	324.10	437.96	1136.98	1271.85	528.95	409.46	541.73	180.76	483.78	473.89	493.34	688.97	376.24	133.61	282.52	351.16	381.66	256.39	710.15	405.96	341.09	466.30	457.10	437.08	308.69	378.56	505.71	537.06
36	E4_Da	NovelBoundary	0	51.61	20.65	4.11	18.98	21.81	14.12	7.78	19.71	16.69	20.85	3.04	19.28	2.83	24.08	7.77	25.86	32.19	36.99	16.18	22.08	17.53	4.96	0.00	27.10	14.28	2.06	0.00	22.74	14.49
37	E4a_E5a	KnownJunction	0	465.87	425.52	401.75	904.83	838.25	576.32	476.94	536.43	233.14	521.09	545.51	559.57	613.48	402.65	71.56	298.73	366.34	356.14	169.49	773.32	473.54	419.37	427.19	604.02	528.23	303.49	368.90	543.67	563.64
38	I4	Intron	0	29.56	8.97	5.86	10.98	9.62	15.95	5.29	22.16	8.59	9.80	7.55	10.66	4.39	12.88	13.27	21.57	22.55	27.27	14.68	18.19	13.43	3.95	3.17	14.60	10.32	2.75	2.00	13.56	2.63
39	I4_AR1	ActiveIntronRegion	0	29.80	9.04	5.91	11.08	9.70	16.08	5.34	22.34	8.67	9.88	7.62	10.75	4.43	12.99	13.38	21.76	22.74	27.50	14.79	18.35	13.53	3.98	3.19	14.72	10.41	2.78	2.02	13.68	2.66
40	E5_Aa	NovelBoundary	1	30.91	14.54	17.22	0.00	21.37	22.83	2.80	35.48	19.89	15.02	17.91	13.28	1.97	18.81	26.51	15.07	36.98	23.12	0.00	37.05	16.53	2.29	5.02	13.28	13.03	0.00	0.00	33.34	15.62
41	ER5a	ExonRegion	0	417.60	287.23	359.07	439.65	401.78	464.78	347.20	595.10	200.08	442.08	396.95	516.96	658.77	417.31	134.00	237.96	351.68	424.04	224.98	714.96	366.47	459.55	440.10	424.96	448.38	227.48	280.41	392.49	443.37
42	E5_Da	NovelBoundary	1	29.20	13.48	8.32	51.33	6.48	21.56	2.69	14.73	15.01	18.97	9.55	15.48	11.85	22.40	9.37	34.88	58.32	23.12	24.28	22.91	16.61	6.37	2.27	28.59	8.83	0.00	0.00	19.23	3.40
43	E5a_E6a	KnownJunction	0	436.61	384.21	329.70	546.13	569.44	431.94	291.80	593.31	208.36	467.32	487.14	527.49	632.37	416.70	224.43	270.42	366.36	495.48	323.47	648.61	353.73	374.30	480.04	489.71	442.35	221.74	374.47	384.43	398.70
44	E5a_E7a	NovelJunction	0	0.00	0.00	8.30	0.00	0.00	7.10	0.00	0.00	2.25	5.83	6.90	5.57	9.43	1.64	0.00	2.83	8.33	8.99	15.74	0.00	1.48	2.04	3.64	2.21	5.61	7.94	7.36	11.73	8.55
45	I5	Intron	0	3.81	0.69	1.49	0.00	1.45	5.30	1.79	4.37	2.16	8.13	3.88	4.39	0.00	2.95	10.35	10.09	2.21	17.90	8.53	12.62	5.92	1.07	0.00	6.38	4.66	0.47	0.00	7.73	1.19
46	I5_AR1	ActiveIntronRegion	0	3.86	0.70	1.50	0.00	1.47	5.36	1.81	4.42	2.19	8.23	3.93	4.44	0.00	2.99	10.48	10.18	2.24	18.11	8.60	12.76	5.99	1.08	0.00	6.45	4.72	0.46	0.00	7.82	1.21
47	E6_Aa	NovelBoundary	0	26.01	47.51	18.34	28.26	27.56	39.37	11.33	9.31	10.08	25.96	7.24	15.96	17.67	17.26	18.34	31.82	49.88	43.15	16.18	45.98	24.67	1.85	2.02	21.95	10.08	2.19	19.08	7.77	14.20
48	ER6a	ExonRegion	0	457.24	328.39	371.18	429.34	435.13	507.98	372.09	631.74	231.73	485.22	434.59	492.56	672.81	452.38	181.85	322.05	378.68	451.59	320.31	781.15	388.52	518.59	508.53	507.08	470.42	239.24	360.45	471.55	510.92
49	E6_Da	NovelBoundary	0	13.80	4.07	6.08	0.00	7.37	16.69	8.18	14.68	4.32	5.31	1.61	9.46	1.97	9.44	24.32	14.61	23.21	15.41	8.09	23.07	7.66	6.76	2.41	17.11	5.64	6.22	9.74	11.73	6.07
50	E6a_E7a	KnownJunction	0	551.16	400.41	473.81	651.82	560.90	708.69	654.48	920.47	337.63	649.48	487.01	595.02	869.03	555.69	170.02	380.05	463.76	337.77	137.57	794.66	490.51	700.53	601.24	540.61	562.60	392.49	527.49	695.81	700.48
51	I6	Intron	0	12.01	3.61	0.00	0.00	0.00	4.62	0.00	11.35	6.28	8.90	1.33	2.08	0.73	4.07	16.00	9.73	6.69	16.20	16.11	17.23	5.60	0.00	0.00	9.64	4.81	0.00	2.05	2.74	1.12
52	I6_SR1	SilentIntronRegion	0	14.62	3.28	0.00	0.00	0.00	5.19	0.00	12.06	7.48	11.01	1.24	2.70	0.70	5.17	20.65	11.52	7.43	20.04	19.25	20.47	6.56	0.00	0.00	11.78	5.57	0.00	2.79	2.90	1.22
53	E7_Aa	NovelBoundary	1	35.33	3.97	15.85	8.41	20.93	33.15	5.49	22.94	6.12	24.53	9.62	18.04	12.01	10.26	35.08	13.92	29.42	37.76	24.28	31.18	15.04	4.08	7.98	14.42	13.75	10.26	1.84	26.60	13.77
54	I6_AR1	ActiveIntronRegion	0	3.52	4.93	0.00	0.00	0.00	3.04	0.00	8.02	2.25	2.37	1.70	0.09	0.84	0.91	0.80	3.98	4.08	4.29	4.85	6.02	2.65	0.00	0.00	3.53	2.14	0.00	0.00	2.21	0.86
55	ER7a	ExonRegion	0	369.83	258.32	438.65	472.06	399.48	344.47	322.44	674.01	210.81	370.16	306.11	490.49	652.77	355.02	159.40	242.42	302.40	412.48	220.51	602.50	314.61	422.15	442.69	396.44	373.47	260.44	333.78	466.72	447.70
56	E7_Da	NovelBoundary	0	14.81	12.51	7.23	9.49	0.00	3.38	2.35	4.28	7.13	5.63	11.51	2.62	0.00	8.11	16.74	3.44	16.34	19.26	0.00	4.13	5.29	0.00	0.00	8.08	0.00	7.72	0.00	1.71	0.00
57	E7a_E8a	KnownJunction	0	332.27	271.27	588.54	418.01	408.81	249.93	300.78	650.39	246.42	382.64	346.21	544.27	663.22	298.56	145.30	231.94	367.42	297.57	274.92	474.36	250.29	427.88	455.07	321.51	333.28	299.63	341.82	397.28	505.40
58	I7	Intron	0	10.05	4.41	2.29	4.20	2.86	4.84	2.36	8.63	2.74	5.64	2.33	3.73	2.16	5.13	6.65	14.06	10.50	11.61	8.12	9.24	5.57	0.70	0.35	4.62	3.63	1.23	3.22	4.14	0.92
59	I7_SR2	SilentIntronRegion	0	5.47	0.00	0.00	0.00	4.15	3.51	0.00	1.56	2.86	4.91	0.00	3.15	1.10	1.54	3.92	0.00	0.00	11.74	0.00	7.03	3.64	0.00	1.54	1.83	1.21	1.34	0.00	1.39	0.00
60	I7_AR3	ActiveIntronRegion	0	13.66	6.84	3.55	6.53	2.97	6.26	3.67	12.85	3.23	7.00	3.61	4.68	2.95	7.41	8.93	21.84	16.31	13.84	12.61	11.84	7.36	1.09	0.00	6.53	5.21	1.43	5.00	5.94	1.42
61	E8_Aa	NovelBoundary	0	5.07	21.14	8.25	30.41	0.00	5.10	11.84	16.67	11.42	8.55	2.82	10.42	0.00	5.58	0.00	20.35	21.38	13.87	24.28	3.14	21.46	4.47	0.00	17.35	8.71	0.00	0.00	6.52	6.07
62	ER8a	ExonRegion	0	419.72	246.23	527.11	515.24	455.29	374.90	325.75	805.59	257.77	375.58	299.16	419.15	643.99	310.73	190.83	251.52	297.48	408.32	297.62	653.74	357.09	497.37	477.81	439.39	352.08	273.66	363.83	408.99	432.28
63	E8_Da	KnownBoundary	0	152.60	49.74	268.76	251.28	141.03	223.34	177.77	468.05	151.71	196.33	90.47	209.60	355.03	155.50	103.65	52.10	212.33	98.76	32.37	247.27	169.87	228.02	195.28	232.98	138.21	205.22	148.74	309.26	261.27
64	E8a_E8b	KnownJunction	0	0.00	0.00	273.22	0.00	0.00	0.00	0.00	0.00	32.37	0.00	0.00	133.85	150.75	70.06	0.00	0.00	180.50	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	110.99
65	E8_Ab	KnownBoundary	0	171.18	108.88	165.21	232.30	168.15	129.76	150.53	298.45	65.08	85.36	124.23	169.51	222.91	122.24	101.45	128.90	98.59	38.02	24.28	234.53	124.06	142.35	178.83	167.54	116.38	132.69	157.69	155.87	169.66
66	ER8b	ExonRegion	0	327.95	184.61	445.01	508.96	336.75	363.19	328.16	808.23	211.22	330.62	235.40	372.30	627.42	261.59	163.54	185.25	313.74	371.71	137.59	582.37	355.74	418.60	424.22	411.30	281.86	289.81	280.96	473.69	420.64
67	ER8c	ExonRegion	0	397.64	337.08	411.56	525.05	434.01	342.52	356.30	795.35	252.00	366.46	349.42	454.03	686.15	324.51	202.97	278.47	322.23	427.63	314.62	591.18	363.62	459.42	464.67	411.33	324.55	279.44	385.23	421.05	451.47
68	E8_Db	KnownBoundary	0	409.42	483.78	414.68	497.17	531.42	448.94	432.14	798.59	392.62	485.82	445.32	506.17	796.55	439.68	372.33	308.37	355.11	431.27	372.03	635.38	397.09	534.55	490.82	507.95	380.37	300.61	404.64	406.36	576.15
69	ER8d	ExonRegion	0	336.97	491.60	234.69	414.10	376.97	406.72	329.17	554.21	498.04	403.35	358.64	369.43	645.30	350.29	335.45	254.79	260.05	404.10	399.64	606.74	365.55	367.07	364.82	504.84	342.99	198.06	389.01	356.78	396.84
70	IG30	Intergenic	0	312.00	19.41	89.52	174.88	297.86	48.96	163.52	91.94	36.50	34.51	12.08	25.49	79.06	24.65	125.46	72.42	56.94	60.77	47.34	320.63	40.40	131.78	56.55	34.69	38.26	50.95	25.04	59.78	93.13
71	IG30_AR1	ActiveIntergenicRegion	0	313.00	19.48	89.78	175.44	298.82	49.11	164.05	92.23	36.62	34.62	12.12	25.57	79.31	24.73	125.84	72.65	57.12	60.96	47.47	321.65	40.53	132.20	56.73	34.80	38.38	51.11	25.12	59.97	93.42