Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	TMEM138	Gene	0	326.76	345.31	202.04	200.50	275.73	362.61	142.33	224.99	177.44	226.44	248.55	220.33	276.95	345.13	174.56	218.55	307.40	263.77	152.39	299.23	164.85	515.49	195.72	250.14	282.88	260.19	321.80	167.38	211.92
2	278826	Transcript	0	308.53	374.77	261.70	178.57	203.62	361.75	133.13	228.65	197.56	234.55	235.57	233.01	290.44	348.89	195.42	181.32	317.27	258.61	139.63	297.52	161.75	560.76	209.56	239.07	288.73	250.95	312.32	145.33	218.31
3	451389	Transcript	0	81.21	28.55	12.49	17.17	6.18	37.42	11.69	18.14	15.86	16.02	7.55	26.66	8.95	48.50	33.07	57.07	75.47	53.53	30.08	23.64	20.55	18.96	4.67	27.76	17.39	18.96	7.63	11.29	9.91
4	ER1a	ExonRegion	0	56.96	25.51	25.19	21.12	29.08	27.77	7.82	14.89	8.21	28.50	16.79	23.48	21.94	35.98	12.59	60.67	42.33	110.85	14.31	58.03	16.88	52.44	65.92	17.23	36.24	55.02	22.94	13.52	42.63
5	E1_Ab	KnownBoundary	0	30.50	17.74	32.29	134.59	140.44	38.87	7.44	25.73	5.51	27.84	18.92	22.68	22.48	34.96	8.37	59.21	31.99	69.99	24.28	42.51	23.75	39.23	37.82	15.01	30.16	14.68	33.45	13.88	32.45
6	ER1b	ExonRegion	0	332.95	308.78	274.53	837.71	1166.24	379.41	173.52	211.16	95.12	288.51	339.51	265.59	341.03	329.08	205.04	504.25	263.48	506.18	225.41	312.61	203.54	529.45	302.83	170.96	297.98	341.17	659.76	313.33	311.20
7	E1_Da	NovelBoundary	0	3.01	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.66	0.00	0.00	0.00	0.00	3.75	1.40	0.00	0.00	0.00	3.65	0.00	0.00	0.00	0.00	0.00	0.00	2.07	0.00
8	E1a_E2a	KnownJunction	0	670.37	587.71	483.42	1357.35	1898.29	803.03	324.64	358.81	200.19	531.80	607.57	435.17	598.20	554.69	406.41	903.68	443.52	604.26	234.68	548.79	358.23	1058.40	548.69	315.35	539.11	638.65	1239.75	524.58	479.36
9	E1a_E3a	NovelJunction	0	10.62	0.00	0.00	0.00	25.79	9.13	0.00	0.00	0.00	0.00	9.24	1.54	0.00	0.00	8.17	0.00	1.35	5.27	0.00	0.00	2.01	7.20	0.00	0.00	1.89	0.00	7.26	0.00	0.00
10	E2_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	3.45	0.00	0.00	0.00	0.00	1.61	0.00	0.00	0.00	0.00	0.00	2.05	19.26	0.00	0.00	0.00	0.00	0.00	2.45	0.00	0.00	0.00	0.00	0.00
11	ER2a	ExonRegion	0	319.59	325.78	184.00	169.20	218.09	433.18	162.01	243.45	136.72	254.71	308.44	245.57	302.17	376.50	145.72	280.89	275.16	287.31	173.57	328.33	190.82	496.50	222.56	235.14	277.65	269.10	438.53	196.88	240.10
12	E2_Da	NovelBoundary	0	10.38	0.00	10.86	0.00	19.45	13.66	2.17	0.00	5.54	20.65	1.27	15.99	1.27	10.13	8.37	2.75	35.02	9.25	24.28	3.56	5.86	19.40	7.29	8.37	11.97	8.37	60.58	4.49	3.10
13	E2a_E3a	KnownJunction	0	423.10	357.17	232.58	175.57	387.00	481.67	196.99	321.79	275.11	285.77	355.98	331.17	373.50	495.95	215.86	256.27	386.01	388.12	137.57	431.28	193.97	650.01	247.33	368.04	344.68	269.46	900.12	342.42	276.16
14	E2a_E4a	NovelJunction	0	0.00	0.00	1.00	0.00	0.00	1.84	0.00	0.00	1.13	1.52	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.48	0.00	3.94	5.74	3.79	0.00	0.00	0.00	0.00
15	I2	Intron	0	11.88	6.79	1.26	1.81	2.46	8.65	1.02	3.94	1.34	3.09	3.45	1.79	1.63	5.36	4.98	7.86	6.77	16.01	3.62	3.47	2.34	3.18	0.46	3.52	2.70	0.79	1.61	2.26	2.36
16	I2_AR1	ActiveIntronRegion	0	16.52	7.68	1.98	8.42	2.90	9.77	2.37	7.62	0.00	2.55	2.12	1.47	3.84	4.83	8.73	5.89	1.77	9.30	3.79	1.60	1.69	5.35	1.07	3.83	2.54	0.00	4.34	2.88	0.80
17	I2_AR2	ActiveIntronRegion	0	11.33	6.99	1.14	0.00	2.50	8.90	0.69	3.14	1.82	3.45	4.06	2.00	1.11	5.87	4.23	8.95	8.66	19.00	3.81	4.23	2.68	2.77	0.31	3.67	2.93	1.07	0.94	2.22	2.96
18	E3_Aa	NovelBoundary	0	22.12	8.43	2.77	8.84	0.00	35.14	0.00	2.54	1.28	7.51	2.85	3.13	3.15	6.20	24.72	3.44	17.69	4.62	0.00	3.47	5.86	0.00	0.00	5.50	1.93	0.00	13.12	0.00	0.00
19	ER3a	ExonRegion	0	549.89	515.77	373.20	412.31	644.21	603.34	221.06	415.08	246.98	356.78	414.36	358.33	440.23	565.45	222.04	287.94	383.67	346.62	238.76	502.67	257.26	831.86	273.16	420.35	463.46	331.52	498.82	260.42	295.81
20	E3_Da	NovelBoundary	0	110.60	13.67	7.52	17.69	6.19	59.55	13.27	17.72	6.85	27.12	34.39	18.49	5.19	39.02	26.91	51.87	68.09	70.12	16.18	40.85	30.28	6.90	4.83	24.23	21.86	20.90	4.27	7.73	18.32
21	E3a_E4a	KnownJunction	0	425.17	528.48	222.29	407.87	443.29	580.89	227.20	365.78	299.17	323.52	489.10	352.34	568.58	561.05	241.18	321.22	326.00	336.49	339.88	559.79	211.94	850.41	326.38	376.96	431.25	340.05	559.59	200.75	311.55
22	E3a_E5a	NovelJunction	0	0.00	3.78	0.00	0.00	0.00	0.00	0.00	0.00	3.23	0.00	0.00	0.00	2.87	0.82	8.17	0.00	1.40	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	16.70	0.00	0.00
23	I3	Intron	0	104.12	28.62	20.60	8.98	14.90	54.67	18.10	18.15	22.70	28.40	14.86	19.86	7.92	50.99	30.87	71.12	93.40	68.01	31.22	29.60	29.73	11.22	3.78	36.75	25.37	16.15	7.34	11.98	11.79
24	I3_SR1	SilentIntronRegion	1	96.81	23.79	10.23	2.33	9.58	47.68	9.99	11.37	13.94	18.50	8.47	15.55	3.73	30.75	11.02	42.13	57.54	53.38	17.95	29.50	23.40	6.85	3.28	29.95	18.72	20.71	5.13	5.55	9.51
25	I3_AR2	ActiveIntronRegion	0	109.33	28.39	21.29	9.28	16.89	54.17	19.84	20.48	23.53	32.70	14.32	24.11	8.67	54.20	31.30	72.31	105.25	76.76	30.15	31.42	30.98	11.30	3.89	37.12	28.35	16.57	6.80	15.45	11.56
26	I3_SR2	SilentIntronRegion	1	114.93	40.99	26.63	6.84	22.55	63.90	19.36	20.94	34.40	30.17	20.77	18.21	9.69	58.78	39.40	83.53	101.23	66.14	32.55	34.43	32.71	13.88	4.11	44.60	24.81	16.03	12.46	8.72	14.50
27	I3_AR3	ActiveIntronRegion	1	112.57	29.92	24.00	15.09	9.26	67.61	20.33	16.80	21.20	26.03	18.86	15.52	8.24	58.07	40.00	89.81	92.44	62.22	45.77	28.76	34.72	13.93	4.47	42.88	26.69	17.70	8.02	9.92	14.75
28	E4_Aa	NovelBoundary	0	111.72	51.19	20.43	19.84	20.34	65.46	15.16	27.07	25.73	25.68	6.96	23.95	6.08	52.84	74.94	89.50	107.89	83.48	56.65	28.12	30.76	11.33	9.70	42.05	49.52	13.13	2.48	16.80	14.66
29	ER4a	ExonRegion	0	560.38	705.69	356.29	347.74	443.82	656.44	213.19	411.55	297.23	393.85	516.69	415.24	487.76	637.27	282.17	348.54	425.94	413.97	282.39	556.03	256.24	921.65	324.06	441.81	509.26	389.99	592.36	246.89	304.99
30	E4_Da	KnownBoundary	0	123.69	13.19	13.28	10.78	19.60	56.17	2.35	36.33	25.82	18.06	7.12	47.17	13.60	61.88	51.03	100.90	105.39	73.98	72.83	27.21	45.24	28.44	6.06	62.21	20.69	33.64	0.00	12.45	12.18
31	E4a_E5a	KnownJunction	0	409.48	565.61	468.97	264.44	245.37	551.34	177.94	353.79	276.72	351.92	355.60	366.86	440.57	519.04	282.64	210.91	404.65	323.77	193.99	425.74	230.55	845.80	297.27	315.95	411.17	298.98	491.56	182.24	301.94
32	ER4b	ExonRegion	0	81.21	28.55	12.49	17.17	6.18	37.42	11.69	18.14	15.86	16.02	7.55	26.66	8.95	48.50	33.07	57.07	75.47	53.53	30.08	23.64	20.55	18.96	4.67	27.76	17.39	18.96	7.63	11.29	9.91
33	E4_Db	NovelBoundary	0	154.54	35.10	34.31	0.00	21.52	88.32	26.49	21.90	28.23	32.28	16.42	33.34	21.88	50.10	86.90	110.62	113.87	70.12	48.55	30.35	33.21	16.04	0.00	56.76	22.88	23.22	11.08	31.27	13.27
34	I4	Intron	0	66.91	20.84	0.74	6.30	8.59	37.47	7.98	11.33	12.84	19.68	6.28	8.70	6.28	17.55	23.85	25.09	0.00	55.48	8.43	15.94	19.44	14.27	1.59	19.86	12.57	17.97	8.05	15.77	4.13
35	I4_AR1	ActiveIntronRegion	0	68.05	21.21	0.75	6.41	8.74	38.13	8.12	11.53	13.06	20.01	6.39	8.85	6.39	17.85	24.27	25.53	0.00	56.45	8.58	16.20	19.78	14.50	1.62	20.21	12.79	18.28	8.19	16.04	4.20
36	E5_Aa	NovelBoundary	0	121.22	46.15	45.17	61.26	28.59	42.97	16.82	56.48	56.18	41.98	15.66	43.01	17.16	58.43	83.32	70.46	143.02	65.50	24.28	32.09	24.07	20.61	10.74	52.46	33.45	25.96	5.86	13.08	9.90
37	ER5a	ExonRegion	0	459.17	533.20	290.93	250.15	336.40	506.14	213.63	317.27	307.74	323.24	334.32	308.69	408.80	491.65	291.03	272.38	504.83	341.19	210.59	408.80	237.83	784.05	265.49	384.05	418.77	398.84	422.48	240.22	310.35
38	IG17_AR1	ActiveIntergenicRegion	0	11.32	20.25	4.89	3.49	13.47	20.83	6.88	9.01	13.82	13.13	5.41	8.98	9.45	9.75	17.69	19.49	16.65	12.07	11.42	12.27	7.80	11.13	6.46	12.93	8.41	4.59	5.06	9.69	6.62
39	IG17_AR7	ActiveIntergenicRegion	0	0.07	3.49	0.00	0.00	0.00	0.00	0.00	0.00	0.21	0.00	0.00	0.00	0.00	0.54	5.60	0.00	0.00	0.26	0.00	0.00	0.00	0.00	0.00	1.55	0.00	1.18	0.00	0.82	1.05