Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	PTPMT1	Gene	0	147.51	94.25	59.93	71.68	207.98	94.63	143.56	106.13	87.30	64.71	58.06	88.92	160.85	81.24	119.28	50.31	57.26	95.75	114.15	200.11	49.19	140.21	63.40	69.74	86.26	53.41	59.68	107.17	63.20
2	426530	Transcript	0	28.83	11.78	9.04	14.21	43.18	17.15	30.62	13.66	12.12	12.99	10.28	17.74	25.73	18.43	19.34	10.31	10.50	20.93	25.42	44.02	11.54	23.24	13.38	13.25	11.35	15.13	11.93	26.26	18.32
3	326674	Transcript	0	460.71	264.20	186.14	238.27	446.67	277.26	576.00	435.14	182.09	184.64	160.99	285.60	509.10	254.03	444.29	149.64	202.46	257.54	349.09	649.27	131.31	391.90	231.50	178.23	238.98	164.90	131.36	313.67	165.79
4	326656	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
5	IG39_SR2	SilentIntergenicRegion	0	4.74	0.97	2.56	6.58	3.12	6.55	0.00	0.00	3.94	2.94	1.08	2.62	1.84	2.72	3.05	2.25	6.17	4.26	0.96	0.83	4.30	0.00	0.00	2.60	2.16	0.00	2.21	1.48	0.41
6	ER1a	ExonRegion	0	8.68	2.75	1.27	17.10	19.76	3.51	6.88	1.33	0.39	2.93	0.41	1.46	2.57	3.03	3.59	3.66	0.53	4.76	3.61	1.42	6.42	5.75	5.52	0.00	0.77	6.29	0.69	3.04	4.19
7	E1_Ab	KnownBoundary	0	8.85	4.85	0.00	0.00	20.78	1.88	2.75	0.00	0.00	3.67	0.00	2.95	0.00	4.05	0.00	3.14	0.00	0.00	0.00	3.89	0.00	11.77	2.17	0.00	1.82	2.15	0.00	4.00	1.68
8	ER1b	ExonRegion	0	100.88	21.92	55.40	115.89	467.40	35.32	101.23	31.02	15.49	24.04	8.33	48.86	81.50	21.39	86.20	52.71	23.82	114.63	29.61	53.16	20.31	84.34	72.53	21.14	20.73	25.18	22.46	74.03	40.35
9	E1_Ac	KnownBoundary	0	309.26	37.42	162.99	334.75	1317.65	105.05	278.75	90.62	60.54	82.29	33.94	147.92	211.67	57.63	228.22	153.00	82.18	272.14	48.55	169.70	58.64	216.54	159.47	58.74	63.08	79.05	52.63	202.46	128.95
10	ER1c	ExonRegion	0	213.48	50.68	125.98	140.00	424.32	71.11	163.46	110.16	39.82	51.81	23.31	89.39	173.60	67.67	143.45	65.07	68.71	142.67	73.36	232.33	37.46	206.76	72.69	46.21	54.43	65.39	30.17	146.82	76.03
11	E1_Da	KnownBoundary	0	73.08	14.74	8.32	0.00	44.06	18.92	26.66	13.79	14.80	16.66	4.40	9.01	21.46	21.96	16.74	7.42	3.96	13.87	24.28	124.13	21.70	41.52	4.53	8.85	12.05	4.29	0.00	12.45	14.43
12	E1a_E1d	KnownJunction	0	523.26	105.19	43.35	29.98	165.06	155.43	196.13	309.25	109.60	61.20	27.52	114.64	305.13	131.52	296.19	102.89	89.16	238.75	113.29	629.42	108.82	531.14	57.82	100.31	117.94	89.18	45.13	114.80	107.59
13	E1a_E2a	NovelJunction	0	2.65	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
14	ER1d	ExonRegion	0	58.38	14.01	17.11	7.51	65.62	24.49	66.26	25.37	18.15	22.09	14.01	33.85	54.31	36.99	44.19	17.25	18.56	41.86	43.78	102.08	14.83	41.86	21.72	24.78	12.77	27.15	15.27	51.52	38.19
15	E1_Ad	KnownBoundary	1	50.61	35.39	31.22	37.53	146.78	30.73	38.16	41.60	31.85	10.87	22.40	59.61	86.68	46.64	42.06	10.02	33.43	51.63	64.74	107.51	9.31	39.67	29.11	32.84	21.90	48.06	28.03	121.76	47.04
16	ER1e	ExonRegion	0	512.37	203.09	167.85	155.76	541.12	254.37	545.84	396.78	179.23	207.94	174.26	330.46	561.00	242.98	506.51	194.11	179.53	400.30	305.32	679.59	126.50	495.08	211.00	169.99	252.83	186.63	159.57	408.98	234.18
17	E1_Db	NovelBoundary	0	2.83	0.00	1.54	21.57	0.00	1.80	5.55	0.00	0.00	0.00	1.42	6.66	1.37	0.00	0.00	2.91	9.25	4.62	0.00	4.13	1.60	2.04	0.00	0.00	3.75	0.00	1.94	0.00	8.35
18	E1b_E2a	KnownJunction	0	330.38	150.18	220.60	194.77	534.66	177.18	468.76	330.45	111.91	124.75	135.11	281.29	407.89	176.41	335.65	91.03	178.88	215.25	186.13	476.51	72.96	289.95	216.26	138.17	165.82	117.16	125.73	323.42	159.26
19	E1b_E3a	KnownJunction	1	114.84	105.68	36.77	29.77	295.77	91.01	85.42	103.36	71.96	115.60	113.88	127.74	153.14	88.01	115.01	46.82	60.80	75.00	145.66	120.00	55.19	164.38	68.75	105.57	80.88	50.17	73.85	163.01	115.61
20	I1	Intron	0	5.32	3.46	1.26	1.87	4.15	6.96	4.22	1.87	4.78	4.10	1.48	1.69	2.64	2.14	5.51	3.44	7.31	6.95	5.42	3.11	2.80	0.77	0.30	1.76	3.22	1.65	1.14	2.45	2.25
21	I1_SR1	SilentIntronRegion	0	5.34	3.47	1.26	1.88	4.17	6.98	4.23	1.87	4.80	4.12	1.48	1.70	2.65	2.15	5.53	3.45	7.34	6.98	5.44	3.12	2.81	0.77	0.30	1.76	3.23	1.65	1.14	2.46	2.26
22	E2_Aa	NovelBoundary	0	8.55	0.00	6.38	9.06	6.04	4.57	2.23	2.24	1.89	5.23	0.00	7.29	3.25	7.25	9.97	0.00	20.93	18.49	0.00	18.44	5.37	2.04	0.00	0.00	3.03	0.00	9.99	2.29	1.58
23	ER2a	ExonRegion	0	519.83	257.73	249.96	239.41	463.28	293.42	582.04	443.83	189.90	193.45	172.10	295.02	546.93	268.38	390.29	136.80	209.40	297.82	319.61	714.53	131.00	449.55	214.21	175.27	253.42	185.68	153.93	320.06	162.14
24	E2_Da	NovelBoundary	0	6.02	0.00	3.96	0.00	0.00	1.92	7.84	2.54	4.20	5.19	4.59	9.79	0.00	5.32	9.97	7.04	16.97	18.49	8.09	0.00	6.86	0.00	0.00	0.00	3.75	1.89	9.14	6.38	1.45
25	E2a_E3a	KnownJunction	0	531.93	384.70	87.85	280.62	342.05	361.19	677.19	531.15	244.44	235.72	175.76	280.48	572.47	317.30	606.93	221.08	219.11	259.56	541.52	756.78	189.96	436.19	264.03	221.26	297.70	191.87	114.40	297.54	175.96
26	I2	Intron	0	5.64	2.04	2.60	2.57	6.82	7.95	7.15	4.40	6.57	7.25	2.80	3.56	3.71	4.87	6.10	4.96	10.60	7.44	4.71	3.99	4.21	1.80	0.72	3.17	4.10	1.57	2.92	4.35	2.27
27	I2_SR1	SilentIntronRegion	0	5.51	1.93	2.74	2.61	7.34	8.29	7.71	4.28	6.50	7.33	2.79	3.87	3.96	4.92	6.65	5.31	10.79	7.33	4.55	3.72	4.33	1.89	0.66	3.33	4.36	1.79	3.23	4.39	2.01
28	I2_AR1	ActiveIntronRegion	0	6.64	2.85	1.63	2.33	3.17	5.60	3.29	5.32	7.15	6.77	2.93	1.40	1.99	4.57	2.21	2.56	9.32	8.31	5.94	5.94	3.37	1.17	1.17	2.10	2.33	0.01	0.77	4.18	4.14
29	E3_Aa	NovelBoundary	0	2.71	9.70	2.67	0.00	7.22	3.41	5.49	2.09	7.55	5.31	12.37	2.95	4.71	8.33	0.00	0.00	7.54	0.00	0.00	0.00	0.00	0.00	0.00	0.00	5.64	0.00	0.00	0.00	8.48
30	ER3a	ExonRegion	0	529.00	436.31	180.04	218.98	754.82	368.52	481.87	368.53	434.04	254.49	229.64	317.75	631.19	317.54	465.86	184.32	193.99	323.20	464.96	742.62	196.09	513.44	218.85	312.25	353.86	173.37	233.86	362.22	240.39
31	E3_Da	KnownBoundary	0	69.31	114.79	69.11	110.43	186.57	122.16	96.18	23.24	121.32	57.96	43.59	90.21	137.79	66.05	57.40	31.75	65.48	55.48	113.07	127.52	51.42	46.19	42.60	77.52	45.01	29.35	40.50	54.19	70.91
32	ER3b	ExonRegion	0	19.43	18.59	8.75	18.03	44.17	23.45	18.71	14.27	17.83	13.97	16.42	17.92	20.30	15.26	10.22	10.00	12.41	16.17	28.87	28.55	13.37	22.11	12.90	14.98	20.51	11.95	19.84	24.21	12.59