Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	DKK3	Gene	0	21.73	27.12	31.57	3.26	11.60	16.30	10.29	3.60	31.39	67.89	13.73	19.11	11.32	10.69	21.58	10.71	19.28	27.44	5.70	9.32	32.27	13.36	65.88	327.57	59.73	6.80	33.59	11.07	27.54
2	326914	Transcript	0	0.00	0.00	19.31	0.00	0.00	0.00	0.00	0.00	3.41	0.00	0.00	9.10	1.66	6.43	0.00	0.00	14.50	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	7.49
3	450094	Transcript	0	2.03	0.31	0.94	0.00	0.29	0.32	0.07	0.00	0.18	1.41	0.08	0.20	0.17	0.90	0.20	0.09	0.14	0.98	0.05	1.87	0.18	0.21	0.57	2.05	0.33	0.05	0.04	3.57	0.27
4	326932	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
5	450571	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.75	0.00	0.00	0.00	0.00	0.00
6	396505	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.18	0.46	0.00	0.00	0.02	0.22	0.00	0.52	0.00	0.19	0.00	0.20	0.00
7	366345	Transcript	0	0.94	0.21	0.11	0.00	2.65	0.00	0.00	0.00	0.00	2.08	0.00	0.00	0.00	0.11	0.00	0.00	0.00	3.75	0.00	0.97	1.52	0.06	1.13	0.20	0.04	0.20	1.26	1.17	0.96
8	IG11_AR4	ActiveIntergenicRegion	0	3.82	0.00	0.00	2.29	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.53	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.81	0.00	0.00	0.00	0.00	0.00
9	IG11_SR5	SilentIntergenicRegion	0	3.14	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.42	0.00	0.18	0.00	0.00	0.47	0.00	0.21	0.00	0.00	0.42	0.32	0.00	0.27	0.32	0.30
10	ER1a	ExonRegion	0	1.10	0.92	1.07	3.67	1.25	0.00	0.52	0.00	0.29	0.37	0.00	0.00	0.00	0.23	0.00	0.00	0.00	0.82	0.00	0.00	0.73	0.00	0.65	1.64	0.08	0.00	0.00	1.25	0.34
11	E1_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.04	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
12	E1a_E3b	KnownJunction	0	0.00	8.05	2.77	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.85	0.00	0.00	0.00	0.86	4.62	0.00	0.00	0.00	0.00	2.51	7.78	1.59	0.00	0.00	0.00	0.00
13	ER2a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.36	0.92	0.00	0.00	0.04	0.44	0.00	1.03	0.00	0.38	0.00	0.39	0.00
14	E2a_E3b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
15	I2_SR2	SilentIntronRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.57	0.00	0.00	0.00
16	E3_Ab	NovelBoundary	0	3.01	0.00	2.02	0.00	6.04	0.00	0.00	0.00	0.00	3.75	0.00	0.00	0.00	1.00	0.00	0.00	0.00	4.62	0.00	3.39	2.05	0.00	2.02	2.93	0.00	0.00	6.06	2.20	3.00
17	ER3a	ExonRegion	0	0.94	0.21	0.11	0.00	2.65	0.00	0.00	0.00	0.00	2.08	0.00	0.00	0.00	0.11	0.00	0.00	0.00	3.75	0.00	0.97	1.52	0.06	1.13	0.20	0.04	0.20	1.26	1.17	0.96
18	ER3b	ExonRegion	0	16.96	10.45	7.43	0.00	4.08	5.09	2.85	1.84	4.16	24.64	4.79	9.84	2.87	5.92	7.11	3.14	4.83	19.34	3.10	8.02	12.02	6.61	26.37	97.27	21.07	4.31	5.57	4.49	11.34
19	E3a_E4a	KnownJunction	0	30.91	21.81	13.16	0.00	6.48	15.35	12.99	2.39	5.30	46.06	3.67	24.22	4.27	10.72	9.97	2.75	16.00	27.74	16.18	11.58	25.27	4.67	50.92	221.08	46.75	20.51	16.85	14.06	29.84
20	E4_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.93	0.00	0.00	0.00	0.00	0.00
21	ER4a	ExonRegion	0	35.29	30.23	31.63	5.30	21.26	30.56	13.72	7.74	13.24	99.87	17.09	34.52	13.45	17.20	25.93	10.67	23.00	48.95	6.46	19.80	49.19	20.60	88.85	389.33	85.21	20.31	38.78	22.19	41.29
22	E4a_E5a	KnownJunction	0	33.56	49.54	44.07	0.00	21.07	18.19	13.62	0.00	14.28	87.40	31.79	37.86	7.80	13.12	9.97	12.93	24.45	49.06	0.00	25.97	57.56	24.75	61.76	476.97	96.87	10.04	22.91	15.91	37.54
23	E4a_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.75	0.00	0.00	0.00	0.00	0.00
24	ER5a	ExonRegion	0	41.59	31.21	41.98	0.00	16.07	28.02	10.34	2.08	12.69	98.76	17.74	27.92	10.13	15.88	25.14	10.18	27.48	38.44	6.68	18.27	41.37	29.77	95.82	433.94	94.61	15.70	34.76	13.20	33.11
25	E5_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.97	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
26	E5a_E6a	KnownJunction	0	35.39	22.01	39.99	0.00	7.37	34.49	5.15	6.52	15.80	134.82	16.54	30.54	13.28	15.62	35.08	10.48	30.93	41.61	8.09	23.90	53.67	19.16	88.85	439.11	57.81	6.18	17.64	10.74	31.40
27	I5_AR2	ActiveIntronRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.83	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.37	1.63	0.00	0.00	0.00	0.00
28	ER6a	ExonRegion	0	23.03	28.15	32.59	3.93	9.96	24.60	12.57	5.56	11.90	75.60	11.27	29.26	12.00	16.35	24.93	12.27	25.33	37.03	0.97	11.91	43.04	16.21	67.29	285.73	53.50	10.83	24.18	22.91	28.98
29	E6_Da	NovelBoundary	0	0.00	0.00	0.00	10.35	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
30	E6a_E7a	KnownJunction	0	18.40	21.43	31.29	0.00	13.85	16.27	10.53	2.54	5.63	42.22	13.51	19.52	12.80	10.55	9.97	0.00	21.11	27.74	0.00	10.34	31.61	13.18	65.40	254.46	56.15	4.25	19.38	15.82	14.39
31	ER7a	ExonRegion	0	23.61	17.90	36.49	0.00	7.01	11.51	10.83	2.01	14.52	48.93	8.00	21.20	10.11	9.93	17.73	11.27	17.39	28.46	3.81	8.24	24.36	16.76	62.29	244.06	49.78	10.48	17.34	10.48	26.51
32	E7a_E8a	KnownJunction	0	24.60	17.74	31.29	0.00	19.45	5.83	21.74	2.34	16.63	45.70	7.43	14.19	14.27	10.90	60.19	20.20	13.42	41.61	16.18	7.69	28.84	8.07	44.62	261.09	49.25	7.98	24.80	3.59	32.52
33	ER8a	ExonRegion	0	18.44	12.37	38.28	4.66	8.82	10.14	9.12	1.49	13.32	48.06	6.16	17.69	7.68	10.58	17.62	10.24	14.98	27.34	7.35	8.40	21.75	13.26	53.34	196.36	39.07	7.67	11.07	15.10	18.21
34	E8a_E9a	KnownJunction	0	2.77	0.00	0.95	0.00	0.00	0.00	0.00	0.00	0.00	1.64	0.00	0.00	0.00	1.13	0.00	0.00	0.00	0.00	0.00	3.14	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.40	0.00
35	E8a_E9b	KnownJunction	0	12.98	13.48	36.05	0.00	5.89	1.80	4.75	0.00	17.24	32.16	5.88	19.04	14.81	6.40	8.37	5.89	13.01	28.51	8.09	2.98	10.43	9.38	32.01	135.60	26.41	6.31	4.92	12.22	18.26
36	ER9a	ExonRegion	0	1.30	0.61	0.94	0.00	0.58	0.64	0.14	0.00	0.37	1.18	0.17	0.40	0.33	0.68	0.39	0.18	0.28	1.97	0.11	0.59	0.36	0.42	1.14	4.10	0.66	0.11	0.09	2.73	0.53
37	E9_Ab	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	1.76	0.00	0.00	0.00	0.00	0.00	0.00	1.24	0.00	0.00	0.00	0.00	4.62	0.00	0.00	1.85	0.00	0.00	2.57	0.00	0.00	0.00	0.00	0.00
38	ER9b	ExonRegion	0	24.32	12.47	40.24	3.93	9.27	11.32	12.12	0.75	22.11	55.38	11.62	14.48	13.52	11.83	19.93	7.21	14.42	33.60	10.46	10.52	28.16	12.50	57.92	248.86	48.70	4.85	15.79	8.83	20.70
39	E9_Da	KnownBoundary	0	9.91	9.02	15.52	0.00	6.48	10.17	0.00	0.00	8.71	38.51	2.88	8.34	4.49	6.89	0.00	3.37	9.34	13.87	0.00	8.27	25.27	6.56	38.37	164.13	31.56	0.00	7.21	0.00	7.30
40	E9a_E9c	KnownJunction	0	0.00	0.00	19.31	0.00	0.00	0.00	0.00	0.00	3.41	0.00	0.00	9.10	1.66	6.43	0.00	0.00	14.50	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	7.49
41	E9_Ac	KnownBoundary	0	5.43	8.14	15.80	0.00	7.22	13.04	7.50	8.86	4.35	30.40	0.00	8.55	5.70	6.82	0.00	0.00	7.32	9.25	0.00	3.23	25.35	14.68	29.11	198.71	19.81	4.29	5.67	12.27	10.07
42	ER9c	ExonRegion	0	27.01	8.54	40.39	0.00	21.92	25.84	16.13	7.36	14.38	77.96	5.47	24.74	10.65	17.60	26.88	6.58	22.44	52.40	4.53	15.18	46.79	20.55	65.10	374.30	58.89	6.29	17.58	12.71	15.84
43	ER9d	ExonRegion	0	22.28	8.45	33.02	0.00	18.59	21.38	19.01	6.64	10.17	65.25	8.42	17.40	9.26	14.32	25.60	11.84	15.35	35.24	4.85	12.30	34.59	18.90	67.10	297.86	49.54	2.97	21.55	10.77	11.26
44	E9_Db	KnownBoundary	0	13.98	13.19	28.68	0.00	0.00	14.12	11.50	5.08	5.91	51.53	16.45	11.11	6.81	11.77	34.88	21.42	13.21	28.25	0.00	10.67	37.06	14.00	70.77	219.58	51.22	0.00	16.20	11.37	3.04
45	ER9e	ExonRegion	0	12.32	17.58	28.94	5.38	3.74	15.44	10.17	7.07	6.97	39.07	6.95	9.95	3.84	8.54	11.61	10.57	10.47	33.75	4.33	9.18	24.31	10.63	62.46	208.60	47.55	1.87	13.55	11.15	8.76
46	E9_Dc	KnownBoundary	0	31.91	34.61	43.33	0.00	14.44	19.26	21.80	10.10	28.84	76.34	13.29	20.12	12.45	19.05	9.37	12.55	21.16	37.12	0.00	15.05	47.45	9.82	94.76	432.77	93.92	5.84	27.78	13.39	28.29
47	ER9f	ExonRegion	0	27.43	42.76	43.44	4.50	16.33	22.25	13.98	4.92	56.44	98.31	21.42	25.08	17.08	13.66	31.48	15.62	28.29	33.08	8.00	10.94	45.74	16.64	92.41	498.07	86.70	7.41	55.94	13.33	40.61
48	IG10	Intergenic	0	0.00	1.01	0.79	0.00	0.00	0.86	0.00	0.29	0.00	2.26	0.75	0.10	0.56	0.28	0.00	0.72	0.47	1.36	0.25	0.00	1.67	0.00	1.56	2.86	0.34	0.00	0.00	0.26	0.42
49	IG10_SR2	SilentIntergenicRegion	0	0.00	1.04	0.16	0.00	0.00	1.11	0.00	0.00	0.00	3.55	1.47	0.40	0.00	0.00	0.00	2.18	0.48	1.02	0.00	0.00	1.62	0.00	0.11	1.08	0.00	0.00	0.00	0.00	0.43
50	IG10_AR2	ActiveIntergenicRegion	0	0.00	1.00	0.99	0.00	0.00	0.78	0.00	0.38	0.00	1.85	0.51	0.00	0.74	0.37	0.00	0.26	0.46	1.47	0.33	0.00	1.69	0.00	2.02	3.44	0.44	0.00	0.00	0.34	0.41