Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	NDUFB8	Gene	0	703.62	280.16	238.22	430.10	395.05	290.33	855.78	286.73	456.31	320.87	188.17	365.65	450.22	324.05	619.03	327.48	249.66	312.51	398.36	445.01	287.75	789.79	473.73	279.46	240.85	452.27	229.31	237.85	373.08
2	370322	Transcript	0	177.36	31.11	49.48	155.73	497.44	38.21	148.48	31.45	54.74	49.56	33.95	24.51	23.56	27.07	62.38	43.42	16.76	38.58	103.01	20.52	40.80	128.31	44.22	19.69	28.41	36.87	56.86	35.14	19.98
3	460375	Transcript	0	16.13	4.18	2.93	0.35	0.24	5.32	16.57	2.05	3.97	8.81	4.74	6.15	2.17	10.92	14.59	56.73	20.29	17.32	22.75	3.70	1.85	2.23	2.90	4.89	4.06	3.92	0.81	8.70	0.88
4	370320	Transcript	0	16.97	10.58	4.21	3.58	0.61	6.04	4.81	1.40	8.54	5.80	1.20	6.28	1.14	16.03	22.40	24.55	21.21	17.38	11.63	6.04	4.48	3.40	1.83	14.32	6.10	2.96	1.15	2.05	5.54
5	299166	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
6	466088	Transcript	0	85.18	22.82	12.14	4.97	5.32	43.51	21.16	5.11	24.60	22.34	10.23	19.57	2.46	47.98	32.77	59.29	70.33	54.88	58.65	34.15	25.81	8.30	2.03	38.47	17.39	6.92	3.23	12.91	5.93
7	464651	Transcript	0	55.97	16.64	28.95	14.79	35.42	23.49	37.72	21.52	20.55	20.82	15.47	22.98	24.51	28.34	34.23	22.05	19.08	21.65	28.36	31.67	15.21	44.99	23.31	19.55	14.39	21.90	17.91	21.15	20.52
8	ER1a	ExonRegion	0	31.53	5.40	4.91	12.08	34.02	5.21	15.29	5.71	6.72	5.61	2.64	2.90	4.76	2.65	6.76	3.52	2.88	6.39	12.04	2.00	3.10	19.38	16.73	1.04	4.24	6.48	3.49	4.46	4.77
9	E1_Ab	NovelBoundary	0	35.75	3.78	5.36	8.63	11.79	6.94	15.62	5.97	7.03	5.07	0.00	6.57	10.92	2.90	0.00	3.06	0.00	0.00	24.28	7.44	0.00	31.02	36.10	2.63	1.48	11.20	0.00	6.69	10.23
10	E1_Da	NovelBoundary	0	659.04	419.41	427.42	1954.60	1273.44	300.03	1892.21	196.38	670.20	277.38	170.00	692.52	689.59	217.02	1055.80	860.76	385.90	808.08	662.46	357.09	331.83	820.90	925.89	252.00	216.21	1037.06	411.05	403.08	682.12
11	E1a_E2a	KnownJunction	0	323.18	56.81	94.05	299.38	960.86	71.21	281.67	57.18	102.75	93.51	65.26	46.11	42.35	51.49	118.00	83.31	30.64	70.77	193.99	39.03	78.50	237.25	71.71	38.34	52.58	67.25	110.23	65.82	35.19
12	ER1b	ExonRegion	0	449.06	123.18	112.21	519.20	856.83	139.53	601.70	87.45	190.44	142.21	70.22	155.85	152.63	73.02	305.23	204.99	98.67	197.86	269.29	82.91	129.09	363.25	291.13	63.46	76.47	149.30	110.81	105.95	117.44
13	ER1c	ExonRegion	0	676.27	221.73	144.75	925.05	1085.98	266.69	1198.36	146.37	424.13	282.98	99.97	295.62	324.75	118.82	534.86	468.18	177.81	352.06	457.11	168.64	271.73	659.80	628.37	111.86	119.35	330.83	161.17	212.72	250.99
14	ER1d	ExonRegion	0	796.84	294.00	181.78	1244.98	1301.43	342.29	1637.29	191.01	565.69	363.11	121.99	419.61	464.72	153.52	683.27	639.64	233.90	511.72	631.35	237.50	359.45	840.98	826.37	154.88	149.72	521.39	209.25	300.74	375.81
15	ER1e	ExonRegion	0	711.75	357.08	446.10	1624.21	964.29	378.93	2012.16	304.59	720.76	332.26	113.67	635.50	839.68	204.19	804.33	703.54	442.19	630.14	593.03	488.35	444.64	1214.35	1028.48	175.83	163.24	856.90	188.53	419.35	681.51
16	E1b_E2a	KnownJunction	0	164.10	92.10	286.00	146.45	90.78	49.65	220.45	58.52	70.68	45.62	45.97	136.32	141.07	86.19	249.55	38.48	82.25	69.99	48.55	90.39	30.44	215.72	86.58	76.44	52.89	97.03	77.38	59.76	127.66
17	E2_Aa	NovelBoundary	0	8.26	0.00	1.15	0.00	0.00	0.00	0.00	0.00	3.29	0.00	0.00	0.00	0.00	1.17	0.00	3.67	0.95	0.00	0.00	0.00	1.64	4.96	0.00	0.00	0.00	0.00	0.00	2.07	2.05
18	ER2a	ExonRegion	0	1857.55	577.45	207.57	521.90	444.89	658.45	1882.82	673.08	1060.03	604.45	265.48	537.00	888.45	513.68	1146.85	801.24	350.59	681.13	837.46	1004.74	742.89	2384.70	722.56	553.79	582.42	1029.58	306.39	374.72	713.10
19	E2_Da	NovelBoundary	0	14.63	3.49	2.27	0.00	0.00	7.83	19.17	0.00	6.88	13.54	4.24	4.49	0.00	11.79	32.89	98.38	22.85	23.12	32.37	6.70	1.80	2.43	2.22	5.26	3.22	5.88	0.00	4.36	1.62
20	E2a_E3a	KnownJunction	0	1973.30	850.45	194.44	498.90	280.89	1399.23	9219.30	841.94	2969.51	2166.61	672.96	1697.47	2561.97	883.41	4113.76	2362.89	1048.50	1946.23	2239.81	1269.51	1511.40	1934.00	2721.88	665.03	1235.59	3956.38	739.35	1719.89	2520.91
21	E2_Db	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.77	0.00	0.00	4.39	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.99	0.00	0.00	2.87
22	E2b_E3a	KnownJunction	0	26.19	4.56	5.03	0.00	0.00	6.45	22.20	2.34	3.96	12.82	6.33	7.05	3.25	14.62	7.77	75.12	32.82	23.12	32.37	3.89	1.68	1.80	2.51	7.30	5.46	3.78	2.04	14.69	1.49
23	ER2b	ExonRegion	0	22.20	7.98	3.77	1.04	0.71	9.52	27.50	3.81	7.94	13.61	7.91	11.40	3.25	18.14	36.00	95.08	28.05	28.85	35.88	7.23	3.87	4.89	6.20	7.38	6.74	7.97	0.39	11.41	1.15
24	I2	Intron	0	5.94	1.09	0.74	2.21	1.07	3.51	1.15	0.24	1.23	3.24	0.73	1.49	0.51	4.67	1.57	2.57	4.46	3.50	4.64	2.05	3.07	0.63	0.40	1.99	1.38	1.17	0.32	1.07	0.38
25	I2_AR1	ActiveIntronRegion	0	6.38	0.51	0.31	1.14	0.77	2.79	2.23	0.00	0.60	1.35	0.76	0.75	0.35	3.66	0.64	2.25	3.73	1.65	3.04	1.19	2.07	0.86	0.29	1.71	0.10	0.60	1.16	1.05	0.01
26	I2_SR1	SilentIntronRegion	0	7.19	1.72	1.04	1.71	1.16	4.50	0.80	0.29	1.84	4.83	0.94	2.22	0.75	5.92	1.79	2.59	6.08	4.73	6.09	2.13	4.40	0.72	0.57	2.39	2.11	1.82	0.00	1.41	0.69
27	E3_Aa	NovelBoundary	0	22.06	4.85	1.22	0.00	0.00	3.88	2.69	2.09	1.49	4.99	0.00	3.37	0.00	7.98	25.91	10.86	7.16	9.25	16.18	0.00	5.05	1.85	0.00	0.00	1.59	1.67	0.00	0.00	0.00
28	ER3a	ExonRegion	0	1611.57	653.99	450.93	362.42	538.60	839.03	3406.66	738.70	1132.88	1203.72	750.63	1538.07	1483.91	947.92	2073.63	929.41	940.50	887.99	1097.65	1085.28	834.49	1558.38	2211.92	610.60	672.64	1962.53	1104.95	1160.67	1512.54
29	E3_Da	NovelBoundary	0	30.08	0.00	2.22	0.00	0.00	12.58	0.00	0.00	0.00	0.00	6.04	0.00	1.50	6.43	0.00	9.94	6.03	9.25	0.00	0.00	4.09	0.00	2.12	8.25	0.00	0.00	0.00	0.00	1.49
30	E3a_E4b	KnownJunction	0	1913.43	677.00	1213.63	551.96	1452.79	672.39	1520.43	778.94	855.05	787.77	449.75	950.31	1005.58	1060.10	1555.29	572.13	812.88	697.12	1116.54	1368.17	626.08	1777.89	961.11	785.44	559.75	869.35	829.90	702.64	834.25
31	E3a_E6a	NovelJunction	0	0.00	3.49	1.54	0.00	14.15	1.96	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.93	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
32	I3	Intron	0	22.39	4.56	2.95	2.92	0.66	7.64	4.37	1.00	3.65	3.72	1.61	2.84	0.26	10.56	3.14	12.51	6.07	6.27	8.67	2.62	5.42	1.47	0.49	3.21	1.94	2.13	0.00	2.87	1.36
33	I3_AR1	ActiveIntronRegion	0	22.44	6.21	3.59	4.27	0.97	8.28	3.40	0.92	3.64	1.75	2.36	2.77	0.38	9.39	3.88	13.02	6.64	6.75	7.01	2.19	5.37	1.60	0.36	3.53	1.52	2.07	0.00	2.95	1.97
34	I3_SR1	SilentIntronRegion	0	22.66	1.01	1.59	0.00	0.00	6.38	6.58	1.18	3.72	8.11	0.00	3.04	0.00	13.31	1.58	11.59	4.93	5.32	12.46	3.60	5.62	1.20	0.79	2.56	2.86	2.30	0.00	2.76	0.03
35	E4_Aa	NovelBoundary	0	31.50	0.00	6.43	0.00	0.00	18.42	0.00	0.00	5.66	7.59	8.92	11.05	0.00	7.89	0.00	14.31	9.00	4.62	16.18	4.13	4.01	0.00	0.00	0.00	0.00	2.19	0.00	0.00	1.72
36	ER4a	ExonRegion	0	55.97	16.64	28.95	14.79	35.42	23.49	37.72	21.52	20.55	20.82	15.47	22.98	24.51	28.34	34.23	22.05	19.08	21.65	28.36	31.67	15.21	44.99	23.31	19.55	14.39	21.90	17.91	21.15	20.52
37	E4_Ab	KnownBoundary	0	34.92	4.85	2.96	0.00	5.75	17.96	8.24	4.98	6.03	8.43	8.22	2.98	0.00	9.73	0.00	12.78	4.73	0.00	8.09	3.89	0.00	1.90	0.00	5.44	3.03	0.00	0.00	8.36	0.00
38	ER4b	ExonRegion	0	1972.37	817.50	1133.92	1730.17	1791.78	820.46	1833.60	938.24	1163.67	904.19	588.22	933.33	1180.33	1102.12	1646.94	710.45	590.22	730.84	1066.20	1375.18	758.35	2031.00	1031.57	909.62	695.98	890.38	591.22	517.74	850.68
39	E4_Da	KnownBoundary	0	108.18	33.64	18.76	21.57	6.48	47.27	25.86	11.89	29.05	28.48	16.64	34.79	6.66	87.65	15.35	80.40	124.84	70.12	24.28	27.87	37.62	25.23	0.00	20.46	31.48	12.36	0.00	10.29	2.97
40	E4a_E5a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.40	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
41	E4a_E6a	KnownJunction	0	1770.80	901.25	124.60	837.32	501.50	846.93	1677.65	705.28	1564.56	738.91	482.05	764.56	1018.76	789.95	1814.01	578.41	419.91	602.59	1091.58	1169.61	779.38	1925.10	939.73	816.06	611.85	965.48	469.54	425.05	755.58
42	E4a_E6b	NovelJunction	0	2.71	0.00	0.00	0.00	0.00	0.00	2.75	0.00	0.00	0.00	0.00	0.00	0.00	1.02	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
43	ER4c	ExonRegion	0	111.23	16.41	16.63	5.66	9.23	36.13	17.62	7.36	22.65	25.73	10.00	28.55	2.29	67.19	57.03	86.12	85.06	66.88	45.17	32.44	27.38	14.42	4.30	34.58	24.76	12.63	4.66	13.99	10.90
44	E4_Db	KnownBoundary	0	70.31	4.46	14.75	0.00	41.56	45.04	18.59	0.00	11.24	24.49	7.47	16.60	0.00	58.58	32.29	81.70	84.14	56.25	64.74	36.80	29.00	6.03	2.36	19.38	10.87	9.70	1.94	6.20	8.12
45	E4b_E6a	NovelJunction	0	0.00	0.00	1.22	0.00	0.00	0.00	0.00	0.00	0.00	3.64	0.00	1.33	0.00	3.90	0.00	3.82	0.00	0.00	24.28	3.23	0.00	0.00	0.00	3.05	0.00	0.00	0.00	0.00	0.00
46	E4b_E6b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
47	ER4d	ExonRegion	0	85.18	22.82	12.14	4.97	5.32	43.51	21.16	5.11	24.60	22.34	10.23	19.57	2.46	47.98	32.77	59.29	70.33	54.88	58.65	34.15	25.81	8.30	2.03	38.47	17.39	6.92	3.23	12.91	5.93
48	E4_Dc	NovelBoundary	0	55.15	30.15	5.11	10.78	12.82	82.95	19.34	0.00	41.08	47.50	14.46	19.70	0.00	72.12	53.02	157.97	98.46	65.11	48.55	50.28	61.85	2.38	2.02	27.63	10.61	4.25	0.00	6.52	7.49
49	I4	Intron	0	62.85	22.04	11.78	7.49	6.99	31.54	13.75	6.69	22.45	24.07	9.43	20.42	3.71	46.30	51.43	62.84	82.78	46.62	37.09	21.35	21.34	4.17	3.38	43.32	17.14	11.33	2.22	10.85	11.56
50	I4_AR1	ActiveIntronRegion	0	35.15	27.21	10.89	8.05	9.88	50.03	14.94	2.90	22.55	26.27	12.83	22.73	1.60	35.74	37.60	79.66	86.19	56.27	60.27	34.41	34.28	0.41	3.25	31.90	9.95	7.06	3.29	8.06	6.01
51	I4_SR1	SilentIntronRegion	0	15.03	11.53	0.00	0.00	0.00	7.19	1.53	1.11	1.14	8.55	1.41	1.08	0.00	8.87	8.59	21.42	0.00	26.73	26.59	7.15	7.16	0.74	0.62	5.04	7.08	3.73	1.48	1.07	1.56
52	I4_AR3	ActiveIntronRegion	0	80.27	21.70	13.84	8.39	6.94	28.27	15.11	8.92	25.56	25.57	9.35	22.42	5.04	55.78	62.93	62.76	93.73	46.05	30.09	18.60	18.64	6.07	3.84	53.23	21.33	14.05	1.93	13.34	15.10
53	E5_Aa	NovelBoundary	0	58.93	50.41	7.60	37.75	0.00	34.19	14.13	2.39	35.57	33.55	1.30	19.70	1.97	35.78	101.06	73.13	62.04	47.01	72.83	10.75	16.97	8.46	1.87	40.02	16.82	12.36	0.00	21.93	6.31
54	ER5a	ExonRegion	0	33.94	21.17	8.43	7.17	1.23	12.08	9.62	2.80	17.09	11.61	2.39	12.56	2.28	32.05	44.80	49.11	41.03	34.77	23.25	12.07	8.97	6.79	3.65	28.64	12.21	5.92	2.30	4.10	11.08
55	E5_Da	NovelBoundary	0	39.23	3.78	1.89	0.00	0.00	10.67	9.50	2.19	27.16	13.94	4.90	11.48	0.00	20.25	39.66	33.66	29.31	4.62	16.18	6.62	1.76	0.00	5.02	36.31	4.66	2.19	0.00	7.64	5.78
56	E5a_E6a	NovelJunction	0	0.00	0.00	3.09	0.00	0.00	0.00	0.00	0.00	5.39	0.00	0.00	5.54	0.00	5.32	0.00	0.00	11.97	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
57	E6_Ab	NovelBoundary	0	22.06	18.71	3.74	0.00	0.00	6.68	0.00	2.39	4.05	3.75	1.55	4.97	0.00	7.00	9.97	13.69	15.10	0.00	0.00	14.80	3.69	0.00	2.31	2.75	5.11	0.00	0.00	0.00	5.74
58	ER6a	ExonRegion	0	1738.36	836.01	264.25	1707.51	1673.80	914.84	1872.63	800.87	1431.93	796.24	468.31	861.49	1115.20	908.41	1862.20	587.13	405.70	839.22	1194.82	1408.15	868.67	1942.45	1119.31	835.72	684.65	1014.49	508.25	480.05	890.53
59	ER6b	ExonRegion	0	1379.85	720.85	156.56	664.72	429.62	497.61	1043.38	548.59	972.02	541.25	338.06	586.88	849.89	654.01	1199.25	429.75	310.76	496.71	816.20	964.74	465.90	1745.41	706.75	657.24	457.79	606.09	316.46	288.10	651.22
60	E6_Da	KnownBoundary	0	830.04	439.67	147.97	434.40	281.92	279.97	582.85	356.67	636.15	435.05	284.71	401.35	494.57	445.64	754.23	281.36	222.93	341.37	711.91	582.12	244.99	1164.19	478.36	455.14	304.52	323.27	239.29	193.39	376.22
61	ER6c	ExonRegion	0	656.29	283.79	246.27	242.46	284.16	221.84	578.82	245.55	565.58	285.58	224.95	310.68	436.25	280.89	657.17	185.45	191.84	231.29	348.45	430.59	202.30	818.00	374.55	344.13	276.02	382.21	340.82	216.50	319.48
62	ER6d	ExonRegion	0	43.58	38.32	16.08	9.75	18.27	25.20	38.30	3.68	37.45	30.80	13.09	21.03	11.26	24.19	65.34	23.62	9.68	26.38	13.58	44.03	16.64	45.67	23.51	18.64	11.91	39.81	14.65	20.10	25.05
63	IG40_AR7	ActiveIntergenicRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.66	1.12	0.00	0.00	0.00	0.00	0.00	0.00	0.76	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
64	IG40_SR5	SilentIntergenicRegion	0	0.00	0.00	0.09	0.00	0.44	0.88	0.00	1.88	1.12	0.81	0.00	1.39	0.00	0.51	0.00	2.70	1.35	1.08	0.05	1.54	1.32	0.00	0.00	1.21	0.00	3.52	0.00	0.91	0.00
65	IG40_AR6	ActiveIntergenicRegion	0	0.00	0.99	1.12	0.00	4.98	2.61	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.01	0.00	4.53	0.00	3.14	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
66	IG40_SR4	SilentIntergenicRegion	0	1.67	0.83	0.35	0.00	0.85	0.43	0.55	1.00	0.00	1.18	0.00	1.98	1.24	0.49	0.00	0.68	1.14	1.05	0.61	0.75	3.07	0.00	0.00	1.62	0.39	1.29	0.00	0.89	0.00
67	IG40_AR5	ActiveIntergenicRegion	0	2.14	0.00	0.00	0.00	0.00	1.37	0.00	0.00	0.00	0.00	0.00	1.24	0.00	0.00	0.00	0.00	1.00	0.00	0.00	0.00	0.24	0.00	0.00	2.15	0.00	0.00	0.00	0.00	0.00
68	IG40_SR3	SilentIntergenicRegion	0	0.21	0.00	0.00	0.00	0.00	1.65	0.00	0.00	0.00	0.00	0.00	0.12	0.00	0.00	0.00	0.00	0.90	0.00	0.00	0.00	0.00	0.00	0.00	1.29	0.00	0.00	0.00	0.00	0.00
69	IG40_SR2	SilentIntergenicRegion	0	1.26	0.00	0.33	2.80	0.00	0.81	0.00	0.00	0.22	0.28	0.27	2.42	0.76	0.53	1.80	1.94	2.43	1.45	0.62	1.08	0.57	0.00	0.00	0.84	0.28	0.92	0.72	1.16	0.00
70	IG40_AR3	ActiveIntergenicRegion	0	0.00	0.00	0.00	0.00	0.00	0.52	0.00	0.00	0.00	0.00	1.19	3.25	0.00	3.63	0.00	0.00	4.01	0.85	0.00	0.00	1.43	0.00	0.00	0.00	0.00	0.00	0.00	5.20	0.00
71	IG40_SR1	SilentIntergenicRegion	0	2.19	1.03	0.43	0.46	0.00	1.23	0.26	0.47	1.04	0.67	0.15	0.69	0.62	1.75	3.41	3.07	0.93	1.50	2.86	1.41	2.83	0.23	0.12	0.41	0.55	0.30	0.00	2.48	1.80