Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	COX15	Gene	0	188.76	151.75	140.24	143.85	143.05	168.42	141.75	79.07	110.17	148.91	215.97	174.44	178.87	198.91	224.62	157.78	101.01	140.14	244.08	222.08	178.96	210.00	197.51	115.60	109.97	161.63	171.56	128.89	146.55
2	485884	Transcript	0	84.24	21.68	77.98	177.70	111.09	36.70	60.67	33.32	13.15	18.91	43.20	73.72	31.96	46.89	87.37	75.67	40.47	110.53	49.33	75.61	31.52	105.82	88.42	8.60	15.01	90.05	21.80	50.53	42.14
3	16171	Transcript	0	141.70	173.40	120.81	134.92	140.42	163.70	129.77	60.36	90.95	142.72	209.99	166.93	151.22	196.38	186.77	150.11	84.74	136.13	261.20	236.16	185.31	178.53	194.88	89.33	103.81	141.63	170.96	121.63	125.51
4	370483	Transcript	0	96.97	87.22	44.85	64.60	66.16	91.66	91.71	34.93	92.03	77.62	124.13	95.83	110.35	94.32	188.68	84.02	55.13	61.80	153.13	109.72	98.77	89.11	78.26	86.88	58.14	66.50	114.19	58.09	81.01
5	497381	Transcript	0	6.36	7.75	4.80	2.52	3.80	3.53	2.10	3.44	10.89	10.41	7.49	11.05	6.06	17.64	8.10	15.02	10.85	15.91	12.21	5.12	11.80	2.89	9.32	8.96	4.33	6.57	8.77	3.39	9.16
6	ER1a	ExonRegion	0	84.24	21.68	77.98	177.70	111.09	36.70	60.67	33.32	13.15	18.91	43.20	73.72	31.96	46.89	87.37	75.67	40.47	110.53	49.33	75.61	31.52	105.82	88.42	8.60	15.01	90.05	21.80	50.53	42.14
7	ER1b	ExonRegion	0	157.68	66.19	229.16	286.04	201.66	89.02	97.42	59.03	26.69	49.68	71.02	138.43	94.69	116.83	52.02	108.35	92.26	119.10	87.68	110.14	101.91	217.39	204.39	26.53	30.66	146.51	54.42	116.45	101.10
8	E1b_E2a	KnownJunction	0	158.61	33.64	17.54	10.78	5.75	44.93	18.02	56.09	14.95	32.56	44.98	23.22	38.72	130.95	16.54	45.52	16.86	23.12	40.46	113.55	25.27	294.82	50.68	54.19	20.12	38.49	4.27	13.75	32.91
9	ER1c	ExonRegion	0	214.35	42.70	17.95	7.31	0.00	50.86	18.14	62.60	15.73	36.09	51.17	25.97	42.87	132.43	11.20	45.55	15.03	35.48	31.68	148.97	24.25	299.25	52.44	58.08	18.58	28.29	5.49	24.45	28.19
10	Ix_SR2	SilentIntronRegion	0	1.85	1.39	0.00	3.10	0.00	2.97	1.74	0.80	2.43	1.25	0.51	2.39	0.00	0.39	2.37	2.92	1.29	2.50	0.00	2.38	1.23	0.78	1.56	0.00	0.00	0.00	0.00	0.70	2.02
11	E2_Aa	NovelBoundary	0	5.54	0.00	1.05	0.00	0.00	0.00	0.00	0.00	5.82	1.76	0.00	2.41	1.53	2.86	0.00	10.02	3.44	0.00	0.00	0.00	6.06	1.90	0.00	0.00	0.00	1.63	0.00	1.93	1.32
12	ER2a	ExonRegion	0	346.55	123.91	56.00	43.60	32.86	173.84	151.84	126.71	43.68	174.40	213.04	181.13	149.43	235.93	88.36	185.98	109.63	190.13	200.23	260.35	163.02	345.61	308.97	72.52	115.98	235.78	81.80	169.29	137.07
13	E2_Da	NovelBoundary	0	2.89	0.00	1.00	0.00	0.00	0.00	0.00	0.00	4.14	0.00	0.00	1.51	0.00	1.13	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.14	0.00	0.00	0.00	0.00	0.00	0.00
14	E2a_E3a	KnownJunction	0	238.95	75.52	313.63	59.10	215.31	161.83	118.32	112.67	47.45	155.15	103.03	157.14	113.43	179.87	67.17	153.23	117.43	191.62	97.11	231.72	120.77	242.16	243.98	76.56	83.46	116.30	194.96	128.59	105.25
15	ER2b	ExonRegion	0	225.27	78.84	267.11	58.85	163.92	159.33	122.77	106.34	35.04	127.74	103.37	154.49	115.86	167.89	54.67	129.55	112.77	142.18	111.42	204.64	124.64	234.36	268.74	71.60	76.91	143.39	215.86	146.70	102.00
16	E3_Aa	NovelBoundary	0	0.00	0.00	1.10	0.00	0.00	0.00	0.00	0.00	1.89	2.04	3.61	1.84	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	11.07	0.00	0.00	0.00	1.93	6.18	5.07	0.00	3.57
17	ER3a	ExonRegion	0	375.67	143.52	467.33	450.11	482.60	214.88	137.40	117.77	59.45	215.19	256.39	191.49	160.71	282.81	92.80	175.40	104.37	207.17	216.28	338.81	188.17	316.48	261.62	108.41	149.05	204.30	112.42	160.26	127.70
18	E3_Da	NovelBoundary	0	8.32	3.78	1.32	8.84	0.00	3.30	0.00	2.54	2.92	9.39	1.42	1.51	1.24	4.23	0.00	3.44	4.75	0.00	8.09	0.00	11.63	0.00	0.00	0.00	1.70	1.89	0.00	2.29	1.29
19	E3a_E4a	KnownJunction	0	456.78	232.87	321.80	582.58	611.00	293.74	171.76	115.01	70.25	292.24	404.48	216.23	196.13	311.92	210.28	221.77	106.56	234.26	469.14	316.32	273.43	365.26	395.13	165.69	208.90	330.70	188.01	199.90	203.17
20	Ix	Intron	0	7.64	2.30	2.39	0.00	1.74	2.45	0.72	2.30	3.40	3.09	2.76	4.18	0.46	6.45	3.60	5.63	3.46	3.55	6.84	0.35	5.85	1.93	1.61	1.92	3.31	1.68	1.96	0.29	0.00
21	Ix_SR1	SilentIntronRegion	0	7.77	2.53	2.53	0.00	1.92	2.58	0.79	2.40	3.74	3.40	3.03	4.30	0.51	6.90	2.95	5.83	3.62	3.90	7.40	0.39	6.44	2.12	1.63	2.02	3.64	1.75	1.94	0.32	0.00
22	E4_Aa	NovelBoundary	0	3.01	0.00	3.96	10.78	0.00	3.26	0.00	0.00	1.28	1.60	2.47	3.31	0.00	10.35	0.00	3.14	8.17	4.62	0.00	0.00	2.01	0.00	2.51	0.00	1.78	0.00	2.34	0.00	3.57
23	Ix_AR1	ActiveIntronRegion	0	6.97	0.00	0.98	0.00	0.00	1.26	0.00	1.38	0.00	0.00	0.00	3.20	0.00	2.04	10.73	3.90	1.96	0.00	1.32	0.00	0.00	0.00	1.58	0.99	0.00	1.05	2.21	0.00	0.00
24	ER4a	ExonRegion	0	399.32	144.33	256.17	182.97	207.92	224.04	191.77	138.42	67.64	234.69	294.71	261.42	238.22	332.57	174.79	201.15	153.74	241.93	240.35	323.68	204.81	362.10	357.15	111.31	168.26	329.43	148.67	201.94	225.39
25	E4_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	1.96	0.00	0.00	0.00	0.00	1.61	1.30	1.46	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.89	0.00	0.00	2.87	1.44	0.00	0.00	0.00	1.82
26	E4a_E5a	KnownJunction	0	565.61	198.17	377.76	128.12	159.01	236.46	158.83	202.50	85.24	173.16	238.90	207.77	203.45	364.14	184.37	221.62	144.28	223.73	274.92	374.30	181.54	480.34	288.06	130.82	152.49	281.77	114.40	140.28	271.30
27	E4a_E6a	NovelJunction	0	2.71	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
28	Ix	Intron	0	0.48	3.22	0.74	0.96	1.30	1.59	0.36	0.00	1.92	1.86	1.75	1.48	0.92	1.57	1.03	0.99	0.80	0.86	3.41	0.25	2.86	0.08	0.64	1.05	1.08	0.91	2.61	0.29	0.80
29	Ix_SR2	SilentIntronRegion	0	0.50	3.38	0.78	1.01	1.37	1.67	0.38	0.00	2.02	1.89	1.84	1.50	0.97	1.65	0.86	1.04	0.84	0.81	3.29	0.26	3.00	0.08	0.68	1.11	1.07	0.96	2.74	0.31	0.84
30	Ix_SR1	SilentIntronRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.39	0.00	1.19	0.00	0.00	4.44	0.00	0.00	1.85	6.15	0.00	0.00	0.00	0.00	0.00	1.38	0.00	0.00	0.00	0.00
31	E5_Aa	NovelBoundary	0	0.00	0.00	4.58	0.00	0.00	1.80	0.00	0.00	6.21	7.71	2.59	2.98	3.18	4.54	0.00	0.00	0.00	4.88	8.09	0.00	9.43	0.00	2.07	0.00	1.48	0.00	0.00	5.39	1.39
32	ER5a	ExonRegion	0	408.77	160.67	348.02	186.52	159.29	220.91	197.84	155.07	72.90	235.44	275.87	272.32	252.99	323.43	186.39	190.74	167.53	218.51	230.49	295.99	198.79	410.10	365.38	100.57	161.23	346.15	188.66	255.60	263.27
33	E5_Da	NovelBoundary	0	2.48	0.00	3.09	0.00	0.00	0.00	0.00	0.00	3.50	2.04	0.00	1.30	0.00	3.70	0.00	0.00	1.40	0.00	0.00	0.00	6.58	0.00	0.00	2.51	0.00	0.00	0.00	0.00	0.00
34	E5a_E6a	KnownJunction	0	587.02	294.83	374.92	376.17	441.82	458.53	321.89	199.61	125.16	371.41	396.22	316.92	360.45	400.88	314.92	284.58	192.14	326.85	274.92	406.88	346.55	489.58	383.80	137.28	208.18	552.82	191.58	293.90	448.59
35	Ix_AR1	ActiveIntronRegion	0	1.13	0.85	0.66	0.00	2.57	2.54	0.00	0.24	2.29	2.28	2.36	0.65	0.51	1.07	1.82	0.00	0.79	0.76	1.68	0.73	3.95	0.71	0.48	1.70	0.38	0.41	5.31	0.86	0.35
36	E6_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	1.76	0.00	0.00	0.00	5.59	4.43	1.17	0.00	0.00	9.97	0.00	0.00	0.00	8.09	0.00	0.00	0.00	2.27	0.00	0.00	0.00	0.00	0.00	0.00
37	ER6a	ExonRegion	0	376.47	162.32	272.21	170.06	130.31	274.41	207.72	171.00	68.04	224.98	228.15	208.84	212.64	279.23	187.55	174.10	119.16	196.20	216.03	277.74	226.83	358.13	292.56	87.67	139.95	308.71	169.60	191.77	193.52
38	E6_Da	NovelBoundary	0	21.65	8.73	5.78	0.00	0.00	3.26	0.00	0.00	1.22	2.04	6.83	3.98	3.50	5.89	27.11	6.81	5.96	4.62	0.00	0.00	7.14	4.38	0.00	0.00	1.93	2.19	0.00	2.16	6.60
39	E6a_E7a	KnownJunction	0	270.63	148.24	230.14	172.77	152.68	251.42	173.53	145.61	57.10	198.21	182.18	211.53	190.05	202.00	181.38	235.31	82.00	194.70	242.55	274.56	200.31	250.57	306.19	59.58	110.93	241.74	117.83	151.37	157.31
40	E6a_E8b	NovelJunction	0	3.01	0.00	0.00	0.00	5.60	0.00	0.00	0.00	0.00	0.00	0.00	1.11	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.57	0.00	0.00	0.00	4.38	0.00	5.93	4.65
41	Ix	Intron	0	8.95	15.52	3.72	2.28	3.36	8.51	2.78	2.63	5.97	8.87	4.35	4.80	1.82	6.95	7.98	9.20	6.47	13.62	11.50	5.31	11.71	1.72	2.97	7.62	3.93	3.74	4.72	4.14	3.75
42	Ix_SR1	SilentIntronRegion	0	8.04	8.61	3.27	1.42	1.83	5.78	3.29	2.18	2.65	4.76	3.37	3.09	0.25	5.10	6.30	5.23	6.12	9.04	9.17	4.10	5.31	0.96	0.39	3.85	2.41	3.57	2.06	4.85	2.90
43	Ix_AR1	ActiveIntronRegion	0	10.03	23.53	4.25	3.27	5.14	11.68	2.20	3.15	9.81	13.64	5.48	6.78	3.63	9.10	9.95	13.80	6.90	18.94	14.24	6.73	19.12	2.59	5.94	12.00	5.70	3.94	7.81	3.35	4.74
44	E7_Aa	NovelBoundary	0	11.80	0.00	10.59	0.00	0.00	19.57	2.35	4.68	11.91	13.62	8.29	11.93	1.97	8.46	0.00	13.31	17.13	33.13	24.28	4.05	9.67	0.00	8.77	8.61	7.16	3.99	3.88	1.98	3.43
45	ER7a	ExonRegion	0	348.68	196.35	310.81	179.37	175.45	244.17	194.14	168.77	83.18	224.53	261.41	224.19	197.85	262.90	158.12	223.13	112.02	223.39	249.39	290.66	229.29	329.13	321.33	80.47	142.73	298.36	199.66	182.24	195.33
46	E7_Da	NovelBoundary	0	18.40	4.85	2.42	0.00	0.00	16.00	2.92	0.00	14.95	7.95	7.69	9.16	1.40	16.26	0.00	7.27	7.00	33.13	0.00	0.00	13.24	1.80	8.72	18.96	3.86	8.71	2.48	10.83	10.23
47	E7a_E8b	KnownJunction	0	245.85	123.32	199.19	64.28	140.15	139.81	167.35	175.42	77.04	82.85	172.57	178.58	179.47	185.38	138.73	163.32	95.46	205.36	218.27	250.25	137.26	247.80	204.34	48.21	76.87	200.80	110.13	108.82	153.78
48	Ix	Intron	0	10.61	14.31	5.67	1.96	6.28	6.86	2.12	2.23	7.93	7.48	8.03	8.84	5.32	10.30	6.74	14.20	7.27	13.86	7.60	2.38	14.79	2.32	6.06	8.13	6.51	4.78	6.64	4.96	7.11
49	Ix_AR2	ActiveIntronRegion	0	10.54	14.81	2.37	2.96	5.76	7.25	2.15	1.23	5.24	8.15	7.23	6.04	3.70	6.28	5.64	17.22	5.96	9.19	5.32	1.80	5.56	4.77	4.56	8.65	4.97	2.55	9.03	3.39	8.52
50	Ix_SR1	SilentIntronRegion	0	10.63	14.26	6.11	1.82	6.36	6.81	2.12	2.36	8.30	7.40	8.13	9.21	5.54	10.84	6.89	13.81	7.45	14.49	7.91	2.46	16.03	1.99	6.26	8.07	6.72	5.08	6.33	5.17	6.93
51	E8_Aa	NovelBoundary	0	8.14	20.26	5.93	0.00	0.00	10.97	2.75	4.78	4.63	3.95	4.46	10.69	1.97	15.58	8.37	12.78	7.07	14.51	8.09	0.00	7.74	0.00	2.22	5.86	4.89	3.60	20.33	1.84	7.66
52	ER8a	ExonRegion	0	6.36	7.75	4.80	2.52	3.80	3.53	2.10	3.44	10.89	10.41	7.49	11.05	6.06	17.64	8.10	15.02	10.85	15.91	12.21	5.12	11.80	2.89	9.32	8.96	4.33	6.57	8.77	3.39	9.16
53	E8_Ab	KnownBoundary	0	2.95	12.51	2.92	0.00	5.60	5.56	0.00	7.07	10.29	9.63	4.05	6.84	1.24	12.98	33.88	15.84	10.44	18.49	24.28	0.00	3.41	4.57	10.54	16.69	3.64	6.31	0.00	3.77	9.81
54	ER8b	ExonRegion	0	282.82	160.55	197.86	141.21	136.09	129.92	149.50	151.75	98.38	118.61	175.68	185.96	178.53	223.64	166.93	154.58	91.49	186.11	283.49	259.88	161.74	318.35	269.22	70.85	118.69	228.11	116.81	133.33	156.93
55	E8_Da	NovelBoundary	0	39.11	0.00	11.93	0.00	0.00	1.57	2.63	2.54	10.29	14.62	9.46	9.64	6.56	9.75	26.71	35.95	6.39	33.52	16.18	12.40	11.31	2.48	4.97	8.43	1.70	8.33	0.00	6.07	14.86
56	E8a_E9a	KnownJunction	0	192.23	130.01	146.28	238.12	103.90	105.43	122.04	125.36	62.06	106.14	175.48	170.18	137.73	198.52	147.10	208.08	72.16	159.90	218.50	228.42	159.00	279.50	255.01	78.54	98.01	175.22	80.21	102.71	104.29
57	E8a_E10a	KnownJunction	1	55.27	13.67	6.68	0.00	0.00	8.10	31.81	10.65	13.58	10.51	7.09	17.89	6.15	9.15	36.28	2.91	1.13	9.89	24.28	14.80	3.61	11.33	11.08	2.45	1.55	13.13	8.85	1.75	4.89
58	Ix	Intron	0	10.61	19.60	2.28	1.77	2.42	5.96	1.50	0.00	5.97	7.51	3.09	7.64	3.12	2.52	3.64	9.48	3.88	9.38	18.98	6.34	8.30	0.89	2.68	2.93	1.59	5.84	5.21	1.61	6.86
59	Ix_AR2	ActiveIntronRegion	0	3.98	8.96	0.00	0.00	0.00	2.52	1.87	0.00	2.08	4.02	1.10	2.29	0.00	0.00	4.28	2.30	0.00	7.10	2.96	0.00	5.26	1.67	0.00	0.00	1.33	0.00	1.70	0.00	1.24
60	Ix_SR1	SilentIntronRegion	0	0.00	0.07	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.12	0.00	5.23	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
61	Ix_AR1	ActiveIntronRegion	0	13.40	24.45	3.03	2.36	3.21	7.46	1.66	0.00	7.56	9.26	3.92	9.74	4.14	3.35	3.32	12.20	5.16	11.20	24.70	8.43	10.09	0.89	3.56	3.89	1.88	7.76	6.63	2.15	8.89
62	E9_Aa	NovelBoundary	0	15.81	17.94	8.07	10.57	7.07	1.80	13.22	0.00	7.37	5.15	1.20	12.05	3.18	1.22	23.72	0.00	7.25	10.02	0.00	11.91	1.56	0.00	9.60	0.00	3.86	18.71	15.06	1.80	5.78
63	ER9a	ExonRegion	0	164.70	134.73	134.08	126.61	86.69	104.13	92.39	147.45	50.49	117.44	155.37	158.21	143.26	206.94	160.24	160.61	81.42	185.09	226.76	206.35	124.39	275.36	242.09	70.38	77.38	205.16	91.22	102.81	108.84
64	E9_Da	KnownBoundary	0	211.99	176.06	145.45	91.88	116.13	111.99	105.45	133.02	68.18	130.62	167.60	157.68	165.27	235.13	201.51	125.30	88.96	196.11	339.43	221.14	139.38	292.53	247.87	59.28	86.68	263.71	129.46	118.39	141.83
65	ER9b	ExonRegion	0	141.70	173.40	120.81	134.92	140.42	163.70	129.77	60.36	90.95	142.72	209.99	166.93	151.22	196.38	186.77	150.11	84.74	136.13	261.20	236.16	185.31	178.53	194.88	89.33	103.81	141.63	170.96	121.63	125.51
66	E9_Db	NovelBoundary	0	117.85	217.56	48.09	66.86	125.56	454.00	188.69	32.35	176.93	201.41	301.57	196.56	184.41	198.72	241.77	261.32	102.51	182.63	428.45	295.40	412.82	120.72	122.53	178.97	152.26	140.76	144.52	78.76	164.84
67	E10_Aa	NovelBoundary	1	98.92	118.67	45.05	71.39	66.02	158.92	153.34	9.21	102.62	121.71	264.91	105.27	86.49	158.15	187.76	118.19	67.60	80.65	209.95	213.86	242.23	107.69	78.26	133.27	85.28	30.51	106.75	29.25	65.73
68	ER10a	ExonRegion	0	138.68	160.78	83.03	129.20	132.32	175.22	151.61	59.20	170.48	144.74	241.18	173.77	214.55	179.48	341.08	165.13	109.13	113.71	281.98	204.64	193.93	166.89	145.44	171.30	114.74	119.86	219.52	114.43	157.14