Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	TAF3	Gene	0	33.95	70.81	45.23	43.15	32.51	73.50	11.31	11.79	69.97	54.83	63.72	65.51	45.45	75.83	36.20	45.89	51.74	62.00	62.80	30.83	80.60	56.05	66.65	72.10	44.63	67.60	58.03	65.22	58.48
2	344293	Transcript	0	35.09	46.73	42.77	35.27	26.10	48.81	9.23	11.59	57.61	42.01	43.50	58.98	43.94	71.74	19.91	36.47	49.10	54.97	46.28	28.94	53.45	54.40	60.80	57.48	38.90	66.81	34.14	56.81	53.73
3	ER1a	ExonRegion	0	16.77	15.81	20.19	22.74	12.31	32.24	5.32	3.24	6.51	21.45	16.09	27.12	14.64	31.07	7.68	41.34	19.91	34.91	13.29	9.51	31.26	29.83	36.64	9.27	9.25	26.24	10.16	26.76	12.37
4	E1a_E2a	KnownJunction	0	38.05	42.85	84.01	73.77	13.85	49.42	13.27	6.57	34.96	58.88	28.91	52.20	29.81	74.60	0.00	53.01	51.73	66.27	48.55	31.59	49.38	63.98	60.43	30.09	30.54	53.13	40.50	44.39	29.35
5	ER2a	ExonRegion	0	61.40	67.06	55.66	51.10	34.75	93.01	11.67	16.79	50.40	69.32	97.71	97.73	42.30	120.16	25.91	63.35	74.48	88.78	55.00	46.98	78.90	73.99	100.20	67.29	56.18	77.64	58.77	81.70	37.11
6	E2_Da	NovelBoundary	0	0.00	0.00	1.12	0.00	0.00	0.00	0.00	0.00	1.46	0.00	5.41	1.51	0.00	1.06	0.00	0.00	1.19	0.00	8.09	3.31	0.00	0.00	0.00	2.87	3.86	2.19	0.00	0.00	0.00
7	E2a_E3a	KnownJunction	0	65.24	38.10	72.40	28.90	26.53	72.67	20.77	20.25	57.83	50.49	84.94	100.84	59.58	126.74	25.91	39.55	83.01	38.53	32.37	52.27	42.44	52.17	110.76	78.00	68.27	94.50	62.87	75.17	40.67
8	I2_AR1	ActiveIntronRegion	0	0.40	1.21	0.42	0.45	0.31	0.43	0.13	0.12	3.76	1.27	0.37	1.08	0.69	0.28	2.93	0.93	3.00	0.12	0.20	0.30	1.79	0.45	0.11	1.08	0.00	0.69	0.00	0.10	0.59
9	I2_AR2	ActiveIntronRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.43	0.00	0.00	0.00	0.00
10	I2_AR6	ActiveIntronRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.79	0.00	0.00	0.00	0.00	0.00
11	I2_AR7	ActiveIntronRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	5.60	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.15	0.00	0.00	0.00	0.00	0.00
12	I2_AR8	ActiveIntronRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	5.60	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.84	0.00	0.00	0.00	0.00	0.00
13	I2_AR9	ActiveIntronRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.42	0.00	0.00	0.00	0.00	0.00	5.60	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.30	0.00	0.00	0.00	0.00	0.00
14	I2_AR11	ActiveIntronRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.45	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
15	ER3a	ExonRegion	0	58.80	108.59	84.07	66.22	42.02	116.16	15.61	18.90	103.63	92.09	105.22	102.30	67.16	126.79	45.38	70.00	83.21	96.27	92.85	37.82	121.09	100.08	120.54	107.54	75.97	115.89	91.09	115.53	89.47
16	E3_Da	NovelBoundary	0	3.01	0.00	0.00	0.00	0.00	1.96	0.00	0.00	0.00	5.91	0.00	1.54	0.00	0.00	9.37	0.00	7.90	4.62	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.19	0.00	2.25	2.51
17	E3a_E4a	KnownJunction	0	48.01	70.29	36.23	29.98	20.78	39.13	5.44	13.64	109.42	44.98	24.55	47.38	59.99	92.04	7.37	26.09	43.42	42.38	89.02	30.76	54.11	87.75	71.61	96.18	36.86	64.54	12.77	64.97	73.46
18	ER4a	ExonRegion	0	23.29	51.41	39.88	17.09	32.59	43.74	9.62	7.01	63.72	28.04	39.22	43.07	49.17	63.21	24.83	24.09	35.01	52.81	44.88	24.21	48.93	66.20	40.30	65.36	44.21	61.12	26.97	60.68	55.21
19	E4_Da	NovelBoundary	0	2.24	0.00	1.42	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.89	1.62	0.00	0.00	0.00	0.00	0.00	0.00	0.00	5.74	2.19	0.00	0.00	0.00	1.89	0.00	0.00	0.00
20	E4a_E5a	KnownJunction	0	29.08	35.00	51.20	31.92	25.79	42.47	5.66	9.36	84.02	35.51	42.14	60.27	58.50	62.19	32.69	24.40	56.99	66.14	56.65	29.36	77.81	41.91	38.46	66.28	30.65	65.66	24.25	59.80	73.49
21	I4_AR2	ActiveIntronRegion	0	1.73	0.80	0.41	0.00	0.00	0.57	1.16	0.00	3.80	0.47	0.98	0.84	0.26	0.33	3.14	0.32	2.72	1.96	2.64	1.34	2.10	0.00	0.00	1.70	0.47	1.36	0.00	1.17	1.49
22	I4_AR3	ActiveIntronRegion	0	0.00	0.00	0.63	0.00	1.92	0.94	0.00	0.00	2.78	1.05	0.58	1.93	1.00	0.43	1.28	1.81	4.69	2.69	2.39	0.16	2.10	0.00	0.00	2.06	0.00	1.73	0.00	2.38	0.00
23	E5_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.40	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.72
24	ER5a	ExonRegion	1	14.60	20.83	20.62	16.19	12.96	16.76	3.10	8.77	34.14	22.24	14.58	33.17	35.42	31.66	12.93	18.69	29.84	31.67	24.01	10.70	23.80	29.61	25.31	25.12	22.47	52.50	15.74	47.35	48.34
25	E5a_E6a	KnownJunction	0	10.56	48.28	25.29	31.06	28.88	15.46	7.78	4.78	41.81	30.08	7.18	65.66	40.25	48.08	24.12	20.12	40.99	41.61	40.46	25.55	14.36	34.66	46.54	39.60	17.88	48.84	20.82	21.30	38.59
26	E6_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	3.80	0.00	0.00	1.55	1.68	8.22	0.00	0.00	0.00	0.00	0.00	3.20	0.00	8.09	0.00	0.00	0.00	4.58	0.00	0.00	1.76	0.00	0.00	0.00
27	ER6a	ExonRegion	0	27.91	29.93	22.49	27.88	17.46	28.20	7.31	14.33	52.01	27.92	32.29	49.06	43.13	56.08	12.88	25.69	42.95	42.16	27.20	22.22	32.82	46.90	43.23	46.02	36.59	77.11	27.30	50.38	58.42
28	E6_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	1.50	0.00	0.00	0.00	0.00	1.46	0.00	0.00	0.93	0.00	0.00	0.00	0.00	24.28	0.00	2.05	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
29	E6a_E7a	KnownJunction	0	48.13	22.98	26.29	31.49	40.82	34.61	4.63	20.25	51.28	33.23	33.22	46.90	38.28	60.73	0.00	39.78	46.73	75.39	24.28	25.55	55.95	58.19	69.93	56.82	52.47	99.82	7.60	62.95	99.24
30	I6	Intron	0	3.01	0.71	0.75	0.00	0.31	0.88	0.13	0.47	1.18	1.20	0.61	0.32	0.33	1.33	2.06	0.95	0.67	1.60	5.10	0.35	1.37	0.23	0.35	2.33	0.18	0.70	0.12	0.83	0.47
31	I6_SR1	SilentIntronRegion	0	3.02	0.71	0.75	0.00	0.31	0.88	0.13	0.47	1.18	1.20	0.61	0.32	0.33	1.33	2.07	0.95	0.67	1.60	5.11	0.35	1.37	0.23	0.35	2.34	0.18	0.70	0.12	0.83	0.47
32	E7_Aa	NovelBoundary	0	0.00	0.00	1.54	0.00	0.00	0.00	0.00	0.00	1.52	3.52	0.00	0.00	0.00	3.21	0.00	0.00	0.90	0.00	8.09	0.00	2.05	2.24	0.00	2.99	0.00	0.00	0.00	2.16	3.27
33	ER7a	ExonRegion	0	14.28	56.30	17.66	30.21	30.59	50.66	9.78	6.73	59.18	31.89	39.44	40.99	32.96	39.33	39.07	27.99	30.05	37.72	53.09	29.73	64.06	21.86	26.43	59.64	24.41	31.56	44.94	27.59	42.77