Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	ATP11C	Gene	0	46.72	12.03	85.26	26.42	156.69	37.40	29.89
2	370557	Transcript	0	6.44	4.96	13.18	6.44	12.62	8.65	2.62
3	359686	Transcript	0	1.15	0.00	2.78	1.75	1.62	0.00	0.00
4	370543	Transcript	0	0.00	0.00	4.23	1.08	2.79	3.69	0.01
5	327569	Transcript	0	47.79	15.07	40.09	10.02	207.62	8.62	43.40
6	361648	Transcript	0	0	0	0	0	0	0	0
7	ER1a	ExonRegion	0	2.81	2.88	5.40	8.17	4.94	8.80	1.93
8	E1a_E3a	KnownJunction	1	22.70	16.95	47.08	16.36	43.66	25.41	7.22
9	ER2a	ExonRegion	0	0.43	0.00	0.38	0.01	0.61	0.00	0.38
10	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
11	ER3a	ExonRegion	0	28.85	15.69	68.65	28.21	49.12	35.97	20.00
12	E3a_E4a	KnownJunction	0	35.65	17.42	77.41	30.75	54.08	32.32	20.29
13	ER4a	ExonRegion	0	44.19	15.00	106.90	31.55	89.18	40.02	28.17
14	E4a_E5a	KnownJunction	0	52.34	16.13	118.30	29.26	152.10	44.81	37.22
15	ER5a	ExonRegion	0	51.44	20.85	116.89	30.91	130.99	41.46	41.70
16	E5a_E6a	KnownJunction	0	49.72	14.55	96.05	36.63	120.91	36.85	29.44
17	ER6a	ExonRegion	0	69.02	29.94	138.86	32.57	201.01	47.34	41.48
18	E6a_E7a	KnownJunction	0	88.29	23.78	171.22	43.21	219.16	36.93	54.39
19	ER7a	ExonRegion	0	61.85	24.35	135.04	46.52	173.16	43.22	38.70
20	E7a_E8a	KnownJunction	0	71.22	21.86	140.50	42.48	224.37	39.02	31.82
21	ER8a	ExonRegion	0	61.14	16.31	121.29	39.73	208.70	40.06	38.22
22	E8a_E9a	KnownJunction	0	46.50	18.26	93.45	40.50	189.24	33.69	31.27
23	ER9a	ExonRegion	0	59.34	16.98	123.67	47.19	131.21	37.62	34.59
24	E9a_E10a	KnownJunction	1	58.06	12.03	128.14	53.83	71.19	36.34	32.86
25	ER10a	ExonRegion	0	71.02	14.28	138.49	52.56	114.03	37.40	34.46
26	E10a_E11a	KnownJunction	0	62.85	12.74	121.17	41.18	143.41	36.26	35.60
27	ER11a	ExonRegion	0	54.45	11.79	121.01	40.63	143.20	38.04	31.27
28	E11a_E12a	KnownJunction	1	43.04	4.68	116.41	30.40	128.91	28.06	22.16
29	ER12a	ExonRegion	0	41.10	15.49	106.88	33.45	121.10	36.60	26.36
30	E12a_E13a	KnownJunction	0	32.81	16.87	80.66	35.16	124.35	38.54	24.98
31	ER13a	ExonRegion	0	52.80	19.79	114.49	34.36	147.99	28.61	35.77
32	E13a_E14a	KnownJunction	0	58.06	25.64	122.00	33.70	147.54	29.02	29.19
33	ER14a	ExonRegion	0	78.21	24.70	147.76	46.41	196.25	48.59	42.31
34	E14a_E15a	KnownJunction	0	63.76	21.15	132.45	39.85	197.22	56.52	42.32
35	ER15a	ExonRegion	0	71.00	18.96	128.52	41.78	179.31	49.56	46.66
36	E15a_E16a	KnownJunction	1	38.97	3.28	111.99	23.57	151.64	29.59	39.28
37	E15a_E17a	NovelJunction	1	8.33	9.20	25.62	20.29	2.17	19.35	0.00
38	ER16a	ExonRegion	0	41.57	7.93	102.17	23.16	149.04	32.45	46.69
39	E16a_E17a	KnownJunction	0	52.29	6.04	89.79	23.95	203.16	39.74	50.56
40	ER17a	ExonRegion	0	50.59	10.33	92.89	38.86	155.67	51.39	39.76
41	E17a_E18a	KnownJunction	0	40.96	18.13	104.04	29.48	116.28	51.88	27.46
42	ER18a	ExonRegion	0	44.00	20.62	95.78	34.05	115.72	60.71	34.24
43	E18a_E19a	KnownJunction	0	45.58	14.55	77.46	38.12	142.07	51.21	35.33
44	ER19a	ExonRegion	0	44.93	17.42	90.21	33.39	142.74	57.18	35.45
45	E19a_E20a	KnownJunction	0	42.21	7.62	87.26	27.31	138.89	49.55	26.08
46	ER20a	ExonRegion	0	96.23	17.94	139.69	34.81	213.57	55.35	38.61
47	E20a_E21a	KnownJunction	1	140.26	27.53	184.04	41.15	223.47	76.92	40.66
48	ER21a	ExonRegion	0	85.60	27.78	136.98	32.01	223.38	53.33	36.56
49	E21a_E22a	KnownJunction	0	44.38	16.58	99.41	28.96	186.08	31.86	35.33
50	ER22a	ExonRegion	0	44.04	15.85	96.50	29.91	195.56	41.09	35.88
51	E22a_E23a	KnownJunction	0	47.77	9.51	113.43	34.11	176.61	43.01	41.78
52	E22a_E23b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
53	E23_Ab	NovelBoundary	0	32.88	4.39	65.27	21.86	107.17	14.74	18.11
54	ER23a	ExonRegion	0	52.41	11.78	120.64	34.79	196.79	39.23	44.39
55	ER23b	ExonRegion	0	74.10	15.41	139.91	45.32	278.74	68.60	57.00
56	E23a_E24a	KnownJunction	0	75.14	26.11	132.26	45.32	263.91	89.06	53.64
57	ER24a	ExonRegion	0	78.29	25.73	120.24	58.03	232.40	93.05	58.63
58	E24a_E25a	KnownJunction	0	68.36	23.20	95.82	59.52	164.83	79.73	64.41
59	ER25a	ExonRegion	0	64.70	25.29	118.04	52.53	264.69	85.67	55.91
60	E25a_E26a	KnownJunction	0	83.35	24.09	117.09	40.45	266.44	55.53	28.92
61	ER26a	ExonRegion	0	72.40	18.50	111.04	37.75	194.21	57.80	40.58
62	E26a_E27a	KnownJunction	0	57.20	14.03	110.35	41.26	182.90	70.13	37.83
63	ER27a	ExonRegion	0	64.89	24.46	135.95	39.83	177.04	64.64	42.27
64	E27a_E28a	KnownJunction	0	77.56	31.24	124.15	33.97	178.18	51.96	33.91
65	ER28a	ExonRegion	0	62.30	26.22	117.02	33.19	143.64	69.34	37.56
66	E28a_E29a	KnownJunction	0	53.21	16.00	126.76	32.51	146.36	35.64	45.27
67	ER29a	ExonRegion	0	50.19	18.74	108.17	25.81	162.58	48.84	40.95
68	E29a_E31a	KnownJunction	0	0.00	0.00	0.79	1.49	0.92	1.66	0.00
69	E29a_E32a	KnownJunction	0	50.95	19.07	34.63	7.96	240.16	7.29	42.16
70	E29a_E33a	KnownJunction	1	3.79	5.99	34.27	18.83	5.09	27.15	1.92
71	ER30a	ExonRegion	0	1.15	0.00	2.78	1.75	1.62	0.00	0.00
72	ER31a	ExonRegion	0	0.00	0.00	7.68	0.67	4.66	5.72	0.03
73	ER32a	ExonRegion	0	50.13	14.01	48.33	12.07	197.46	9.92	47.41
74	E32a_E33a	KnownJunction	0	42.29	12.14	37.31	10.02	185.25	8.66	40.62
75	I32_AR2	ActiveIntronRegion	1	2.98	4.88	22.69	1.17	7.49	4.14	1.34
76	ER33a	ExonRegion	0	49.90	7.53	85.49	23.53	211.11	37.31	31.98
77	ER33b	ExonRegion	0	0.26	0.00	0.23	1.25	1.89	0.41	1.35