Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	CD99	Gene	0	47.04	46.67	4.94	12.78	138.13	227.89	289.68
2	381192	Transcript	0	18.11	11.96	1.68	5.19	45.63	82.92	80.42
3	398818	Transcript	0	0.31	0.00	0.00	0.00	0.97	1.47	2.43
4	381187	Transcript	0	0.88	2.99	0.00	3.09	9.11	15.30	5.43
5	381184	Transcript	0	1.55	1.55	0.25	0.15	2.07	4.75	4.77
6	381180	Transcript	0	0.31	0.50	0.00	0.31	0.18	0.30	1.21
7	381177	Transcript	1	1.03	1.56	0.18	0.35	2.05	9.62	5.08
8	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	2.63	3.98	0.00
9	ER1b	ExonRegion	0	2.16	1.75	0.55	0.70	24.36	19.72	14.59
10	E1_Ac	KnownBoundary	0	1.42	1.63	0.00	1.68	5.58	13.56	16.48
11	E1_Ad	KnownBoundary	0	5.64	2.89	0.70	0.00	12.68	35.08	27.72
12	ER1c	ExonRegion	1	7.68	2.73	0.68	1.25	20.04	50.27	37.44
13	ER1d	ExonRegion	0	36.28	14.47	1.85	5.26	56.21	78.28	83.55
14	E1_Ae	KnownBoundary	1	143.10	40.80	5.78	9.02	72.73	131.29	250.91
15	ER1e	ExonRegion	0	97.84	41.49	5.12	11.58	129.36	175.63	251.45
16	E1a_E2a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
17	E1a_E3a	KnownJunction	0	76.09	36.62	6.22	11.78	229.12	217.61	259.31
18	ER2a	ExonRegion	0	0.62	1.00	0.00	0.61	0.35	0.60	2.42
19	ER3a	ExonRegion	0	99.41	77.79	7.68	19.80	313.04	388.20	447.60
20	E3a_E4a	KnownJunction	0	66.23	80.81	3.09	15.09	345.08	336.77	401.06
21	E3a_E5a	KnownJunction	1	0.88	2.99	0.00	3.09	9.11	15.30	5.43
22	ER4a	ExonRegion	0	135.36	111.51	10.34	30.60	406.93	619.79	634.90
23	E4a_E5a	KnownJunction	0	145.80	96.89	13.44	29.85	430.51	623.63	596.76
24	I4_AR1	ActiveIntronRegion	1	1.99	9.72	0.38	0.00	1.19	2.02	1.87
25	ER5a	ExonRegion	0	248.05	161.87	18.71	50.82	403.88	926.58	962.82
26	E5a_E6a	KnownJunction	0	223.14	162.83	12.82	49.52	354.88	899.45	949.94
27	ER6a	ExonRegion	0	175.33	155.45	12.82	45.41	400.29	747.17	915.97
28	E6a_E7a	KnownJunction	0	86.92	95.47	6.65	19.86	430.21	459.72	654.10
29	ER7a	ExonRegion	0	94.44	93.65	10.02	30.71	394.48	494.77	714.14
30	E7a_E8a	KnownJunction	0	81.83	77.68	11.11	38.52	405.29	432.33	567.42
31	ER8a	ExonRegion	0	97.46	105.79	11.60	41.74	365.86	501.60	618.01
32	E8a_E9a	KnownJunction	0	91.88	101.46	8.03	24.06	320.57	431.34	578.22
33	ER9a	ExonRegion	0	87.67	104.92	6.72	24.39	314.88	500.98	663.68
34	E9_Ab	KnownBoundary	0	93.71	101.49	9.73	26.22	366.93	541.38	763.48
35	ER9b	ExonRegion	0	100.57	127.83	13.44	31.91	370.20	642.38	849.46
36	E9a_E11a	KnownJunction	1	0.92	0.00	0.00	0.00	2.28	8.50	3.22
37	E9a_E12a	NovelJunction	0	0.82	1.26	0.86	1.33	2.05	6.83	19.29
38	E9a_E13a	KnownJunction	0	0.00	0.00	0.00	0.00	0.95	7.42	0.89
39	E9a_E13b	KnownJunction	0	98.45	139.08	16.37	36.17	320.73	674.36	808.54
40	ER10a	ExonRegion	0	0.31	0.00	0.00	0.00	0.97	1.47	2.43
41	ER11a	ExonRegion	0	0.77	0.00	0.00	0.00	0.83	2.00	1.92
42	E11a_E12a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	1.66	0.82
43	ER12a	ExonRegion	0	4.49	6.21	0.99	0.60	5.16	6.86	13.12
44	ER13a	ExonRegion	0	2.07	3.11	0.37	0.70	3.16	11.82	9.27
45	E13_Ab	KnownBoundary	0	3.59	1.23	0.00	0.00	0.88	8.55	6.31
46	ER13b	ExonRegion	0	115.70	159.95	15.41	33.45	391.09	690.21	956.85
47	E13a_E14a	KnownJunction	0	103.66	157.08	13.06	23.35	419.47	604.55	886.18
48	ER14a	ExonRegion	0	100.66	124.86	14.15	30.87	366.75	603.36	821.67
49	E14_Da	KnownBoundary	0	50.49	53.12	8.15	20.56	218.73	238.44	371.54
50	E14_Db	KnownBoundary	0	62.62	39.25	6.73	14.39	57.06	186.82	233.49
51	ER14b	ExonRegion	0	67.53	68.79	9.85	25.82	161.77	309.16	424.29
52	ER14c	ExonRegion	0	36.22	23.92	3.36	10.37	88.63	161.86	160.85