Order SeqName SeqType IsAE Lum_Epi Lum_Epi2 Myo_Epi Myo_Epi2 hESCs StemLike vHMECs 1 TTC16 Gene 0 0.10 0.36 0.25 0.42 0.10 0.19 0.11 2 373288 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3 316259 Transcript 0 0.22 0.00 0.00 0.00 0.00 0.00 0.00 4 373289 Transcript 0 0 0 0 0 0 0 0 5 393748 Transcript 0 0.10 0.58 0.15 0.00 0.04 0.00 0.05 6 IG23_AR1 ActiveIntergenicRegion 0 1.98 7.85 1.76 2.07 4.46 2.07 2.67 7 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8 Ix_AR1 ActiveIntronRegion 0 6.65 4.29 10.04 2.85 6.76 3.33 4.36 9 Ix_SR2 SilentIntronRegion 0 5.12 6.27 7.69 2.67 8.58 2.24 3.77 10 Ix_SR1 SilentIntronRegion 0 8.90 8.34 9.53 5.16 8.15 3.06 7.16 11 Ix_AR2 ActiveIntronRegion 0 6.67 9.37 5.90 1.28 5.24 6.42 3.25 12 Ix Intron 0 13.61 11.46 19.75 8.78 9.65 4.12 6.47 13 Ix_SR1 SilentIntronRegion 0 13.67 11.50 19.82 8.81 9.70 4.14 6.49 14 Ix Intron 0 6.77 8.85 9.17 4.39 5.19 3.74 5.03 15 Ix_SR1 SilentIntronRegion 0 2.97 8.32 4.05 1.79 2.70 5.12 3.48 16 Ix_AR1 ActiveIntronRegion 0 8.08 9.09 10.94 5.29 6.05 3.31 5.58 17 Ix Intron 0 14.90 13.77 16.23 13.49 11.60 6.34 5.80 18 Ix_AR1 ActiveIntronRegion 0 14.95 13.80 16.28 13.53 11.64 6.35 5.81 19 ER2a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 20 ER2b ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.11 21 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.64 22 ER3a ExonRegion 0 0.00 0.00 0.35 0.00 0.21 0.54 0.28 23 E3a_E3c KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.77 24 ER3b ExonRegion 0 0.00 0.00 0.00 0.00 0.40 0.52 0.88 25 ER3c ExonRegion 0 0.30 1.73 0.45 0.00 0.13 0.00 0.14 26 E3_Ac KnownBoundary 0 1.00 0.00 0.56 0.00 0.00 0.00 0.00 27 ER3d ExonRegion 0 0.25 0.00 0.88 0.01 0.00 0.00 0.39 28 E3b_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 29 E3b_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 30 ER4a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 31 E4a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 32 ER5a ExonRegion 0 0.00 0.00 0.00 0.93 0.00 0.00 0.16 33 E5a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.79 34 ER6a ExonRegion 0 0.14 0.00 0.24 0.73 0.32 0.00 0.66 35 E6a_E7a KnownJunction 0 0.92 0.00 0.88 0.00 0.00 0.00 0.00 36 ER7a ExonRegion 0 0.19 0.86 0.33 0.00 0.19 0.00 0.04 37 E7a_E8a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 38 ER8a ExonRegion 0 0.00 0.75 0.00 1.78 0.00 0.00 0.17 39 E8a_E9a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 40 E8a_E10a KnownJunction 0 0.00 0.00 0.00 5.04 0.00 0.00 0.00 41 ER9a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 42 E9a_E10a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 43 ER10a ExonRegion 0 0.00 0.00 0.31 1.37 0.00 0.00 0.00 44 E10a_E11a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 45 ER11a ExonRegion 0 0.00 0.65 0.00 0.00 0.00 0.00 0.00 46 E11a_E12a KnownJunction 0 0.00 1.52 0.00 0.00 0.00 0.00 0.00 47 ER12a ExonRegion 0 0.30 0.00 0.26 0.48 0.00 0.00 0.15 48 E12_Da KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 49 E12a_E13a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.89 50 ER12b ExonRegion 0 0.44 0.00 0.00 0.00 0.00 0.00 0.00 51 ER13a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.24 52 E13a_E14a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 53 ER14a ExonRegion 0 0.06 0.19 0.37 0.49 0.17 0.57 0.00 54 ER15a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00