Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	C9orf84	Gene	0	8.62	0.45	1.04	0.06	0.80	0.20	1.00
2	374283	Transcript	0	0.99	0.22	0.23	0.00	0.37	0.00	0.15
3	374287	Transcript	0	0	0	0	0	0	0	0
4	318737	Transcript	0	0.26	0.00	1.45	0.00	0.00	0.00	0.00
5	394779	Transcript	0	0	0	0	0	0	0	0
6	394778	Transcript	0	6.09	0.00	0.00	0.00	0.00	0.00	0.89
7	394777	Transcript	0	0	0	0	0	0	0	0
8	ER1a	ExonRegion	0	0.63	0.00	0.05	0.00	0.00	0.00	0.00
9	E1a_E2a	KnownJunction	0	0.70	0.00	0.00	0.00	0.00	0.00	0.00
10	ER2a	ExonRegion	0	1.81	0.00	0.86	0.00	0.42	0.00	0.00
11	E2_Ab	KnownBoundary	0	2.54	0.00	2.18	0.00	1.13	0.00	0.00
12	ER2b	ExonRegion	0	3.89	0.00	1.20	0.00	0.59	0.00	0.00
13	E2a_E3a	KnownJunction	0	3.62	0.00	0.00	0.00	0.00	0.00	0.00
14	ER3a	ExonRegion	0	2.22	0.00	0.40	0.00	0.00	0.00	0.99
15	E3a_E5a	KnownJunction	0	4.42	0.00	0.00	0.00	0.00	0.00	0.87
16	ER4a	ExonRegion	0	0.52	0.00	2.91	0.00	0.00	0.00	0.00
17	E4a_E5a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
18	ER5a	ExonRegion	0	2.49	0.00	0.36	0.00	0.00	0.00	0.35
19	E5a_E6a	KnownJunction	0	2.29	0.00	0.00	0.00	0.00	0.00	0.00
20	ER6a	ExonRegion	0	1.52	0.00	0.54	0.00	0.45	0.00	0.55
21	E6a_E8a	KnownJunction	0	0.60	0.00	0.00	0.00	0.00	0.00	0.00
22	ER7a	ExonRegion	0	0.20	0.23	2.57	0.17	0.23	1.50	0.18
23	E7_Ab	KnownBoundary	0	0.00	1.39	4.35	1.68	1.18	1.47	0.00
24	ER7b	ExonRegion	0	0.00	0.29	4.41	0.53	0.20	0.32	0.00
25	E7a_E8a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
26	ER8a	ExonRegion	0	0.52	0.00	0.68	0.62	0.27	0.00	0.67
27	E8a_E9a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
28	ER9a	ExonRegion	0	0.87	0.00	0.42	0.00	0.00	0.00	0.00
29	E9a_E10a	KnownJunction	0	2.70	0.00	0.00	0.00	0.00	0.00	0.00
30	ER10a	ExonRegion	0	1.63	0.00	0.36	0.62	0.27	0.00	0.00
31	E10a_E11a	KnownJunction	0	2.44	0.00	0.00	0.00	0.00	0.00	0.00
32	ER11a	ExonRegion	0	2.26	0.60	3.13	0.00	1.88	0.00	0.00
33	E11a_E12a	KnownJunction	0	1.77	1.42	0.00	0.00	0.00	0.00	0.00
34	ER12a	ExonRegion	0	2.14	0.86	0.37	0.00	1.14	0.00	0.47
35	E12a_E13a	KnownJunction	0	1.03	1.39	0.69	0.00	0.00	0.00	0.00
36	ER13a	ExonRegion	0	0.72	0.28	0.12	0.00	0.86	0.00	0.00
37	E13a_E14a	KnownJunction	0	0.88	0.00	0.00	0.00	0.00	0.00	0.00
38	ER14a	ExonRegion	0	2.44	0.00	0.57	0.00	0.88	0.00	0.46
39	E14_Da	KnownBoundary	0	2.59	0.00	0.00	0.00	2.17	0.00	0.62
40	E14a_E15a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
41	ER14b	ExonRegion	0	0.83	0.90	0.00	0.00	1.08	0.00	0.60
42	ER15a	ExonRegion	0	19.39	0.22	1.48	0.00	1.08	0.22	1.11
43	E15a_E16a	KnownJunction	0	25.40	0.00	0.89	0.00	0.00	0.00	0.00
44	ER16a	ExonRegion	0	15.43	0.00	1.40	0.00	0.34	0.00	0.82
45	E16a_E17a	KnownJunction	0	12.05	0.00	0.00	0.00	0.00	0.00	1.78
46	ER17a	ExonRegion	0	12.80	0.52	0.58	0.51	0.93	0.00	1.54
47	E17_Da	NovelBoundary	0	9.48	1.18	3.00	0.00	2.03	0.00	0.60
48	E17a_E18a	KnownJunction	0	5.27	0.00	0.00	0.00	0.00	0.00	0.89
49	E17a_E19a	KnownJunction	0	6.09	0.00	0.00	0.00	0.00	0.00	0.89
50	I17	Intron	0	9.71	0.41	1.26	0.21	1.23	0.00	0.68
51	I17_SR1	SilentIntronRegion	0	9.72	0.41	1.26	0.21	1.23	0.00	0.68
52	ER18a	ExonRegion	0	16.20	0.00	0.00	0.02	0.79	0.00	0.66
53	E18a_E19a	KnownJunction	0	16.74	0.00	0.00	0.00	0.00	0.00	0.00
54	ER19a	ExonRegion	0	28.49	1.03	1.73	0.00	0.69	0.00	1.31
55	E19_Da	NovelBoundary	0	10.11	0.00	1.26	0.00	1.13	0.00	0.56
56	E19a_E20a	KnownJunction	0	21.41	0.00	0.82	0.00	0.00	0.00	0.62
57	ER20a	ExonRegion	0	19.43	0.00	0.46	0.00	0.00	0.00	1.74
58	E20a_E21a	KnownJunction	0	20.61	0.00	0.00	0.00	0.00	0.00	0.80
59	ER21a	ExonRegion	0	20.66	0.97	0.06	0.00	0.59	0.00	0.26
60	E21a_E22a	KnownJunction	0	17.24	1.34	0.53	0.00	0.00	0.00	0.00
61	ER22a	ExonRegion	0	18.96	1.16	0.26	0.00	1.14	0.00	1.88
62	E22a_E23a	KnownJunction	0	21.90	0.00	0.00	0.00	0.00	0.00	3.30
63	ER23a	ExonRegion	0	17.74	0.00	0.44	0.00	0.35	0.00	1.49
64	E23a_E24a	KnownJunction	0	2.04	0.00	0.00	0.00	0.00	0.00	0.00
65	E23a_E25a	NovelJunction	0	15.84	0.00	0.00	0.00	0.00	0.00	3.17
66	ER24a	ExonRegion	0	3.11	0.00	0.00	0.00	0.00	0.00	0.46
67	E24a_E25a	KnownJunction	0	1.03	0.00	0.00	0.00	0.00	0.00	0.00
68	ER25a	ExonRegion	0	14.90	0.00	0.42	0.00	1.02	0.00	0.91
69	E25a_E26a	KnownJunction	0	14.75	0.00	0.00	0.00	0.00	0.00	1.75
70	ER26a	ExonRegion	0	20.17	0.00	0.00	0.00	0.01	0.00	1.41
71	E26a_E27a	KnownJunction	0	17.92	0.00	0.00	0.00	0.00	0.00	2.52
72	ER27a	ExonRegion	0	14.23	0.40	0.41	0.00	0.62	0.00	2.07
73	E27a_E28a	KnownJunction	0	18.69	1.63	0.00	0.00	0.00	0.00	2.34
74	ER28a	ExonRegion	0	13.25	0.96	0.68	0.00	1.38	0.00	3.51
75	E28a_E29a	KnownJunction	0	15.79	1.08	0.00	0.00	0.00	0.00	5.86
76	ER29a	ExonRegion	0	11.79	0.96	1.47	0.00	0.95	0.29	2.06
77	E29a_E30a	KnownJunction	0	16.89	1.00	0.00	0.00	0.88	0.00	0.00
78	ER30a	ExonRegion	0	9.22	1.08	1.59	0.00	1.18	1.50	0.79
79	E30_Da	KnownBoundary	0	6.46	2.78	3.64	0.00	1.11	0.00	0.64
80	ER30b	ExonRegion	0	3.17	1.71	1.35	0.00	2.91	0.00	0.19
81	E30_Db	KnownBoundary	0	2.00	0.00	0.00	0.00	4.43	0.00	0.00
82	ER30c	ExonRegion	0	1.15	0.01	1.16	0.00	1.57	0.00	0.51