Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	CENPP	Gene	0	2.95	1.56	5.42	1.79	11.45	1.90	2.63
2	402724	Transcript	0	1.41	0.10	1.13	0.73	7.23	0.00	0.76
3	375587	Transcript	0	7.97	3.32	25.15	3.31	44.02	8.08	7.13
4	375579	Transcript	0	0.81	1.27	1.16	0.94	0.49	1.48	0.81
5	375576	Transcript	0	2.73	2.58	1.77	1.35	1.27	1.62	3.15
6	ER1a	ExonRegion	0	2.82	0.20	2.26	1.45	13.55	0.00	1.53
7	E1_Ab	KnownBoundary	0	6.33	1.05	3.95	5.01	23.54	0.00	3.83
8	ER1b	ExonRegion	0	6.38	2.75	9.54	1.58	19.25	4.92	3.67
9	E1a_E2a	KnownJunction	0	4.82	4.15	13.09	2.82	12.79	11.93	4.07
10	E1a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.90	0.00	0.00
11	ER2a	ExonRegion	0	8.50	2.88	24.45	4.36	47.40	6.72	7.84
12	E2a_E3a	KnownJunction	0	10.60	2.92	37.92	2.74	71.86	5.60	9.49
13	ER3a	ExonRegion	0	11.25	2.89	32.26	3.95	56.76	5.95	11.04
14	E3a_E4a	KnownJunction	0	7.64	2.81	26.13	3.20	44.65	6.67	10.45
15	ER4a	ExonRegion	0	9.80	1.24	25.94	3.08	52.44	5.14	9.27
16	E4a_E5a	KnownJunction	0	12.37	0.00	17.16	2.76	75.13	5.68	5.70
17	ER5a	ExonRegion	0	6.45	0.00	17.21	2.22	56.65	3.31	5.91
18	E5a_E7b	KnownJunction	0	3.15	0.00	6.70	0.00	32.74	1.31	5.30
19	I5_AR3	ActiveIntronRegion	0	1.68	0.82	2.03	0.00	3.26	9.72	0.63
20	I5_SR2	SilentIntronRegion	0	1.23	0.00	0.37	0.68	2.06	10.62	0.37
21	I5_AR3	ActiveIntronRegion	0	0.38	0.40	1.76	1.12	3.12	30.95	0.44
22	I5_AR4	ActiveIntronRegion	0	0.00	0.00	1.73	1.25	1.94	17.41	0.00
23	I5_SR3	SilentIntronRegion	0	0.00	0.00	2.74	0.65	1.08	13.54	0.06
24	I5_SR4	SilentIntronRegion	0	0.00	0.00	3.34	0.00	1.21	14.36	0.49
25	I5_AR1	ActiveIntronRegion	0	2.07	0.00	0.17	0.00	2.92	13.27	0.00
26	E6_Aa	NovelBoundary	0	2.05	2.29	1.52	2.76	1.15	9.03	2.49
27	ER6a	ExonRegion	0	1.62	2.55	2.32	1.88	0.98	2.96	1.63
28	E6a_E7b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
29	ER7a	ExonRegion	0	2.73	2.58	1.77	1.35	1.27	1.62	3.15
30	E7_Ab	KnownBoundary	0	0.00	4.73	1.22	1.57	1.89	1.58	1.52
31	ER7b	ExonRegion	0	5.49	1.60	9.10	0.79	26.27	1.29	3.07
32	E7a_E8a	KnownJunction	0	5.26	0.00	7.31	1.57	22.20	1.34	0.64
33	E8_Aa	NovelBoundary	0	0.98	6.07	8.33	7.56	0.00	10.72	0.73
34	ER8a	ExonRegion	0	5.61	4.01	11.91	4.47	44.35	3.68	4.75
35	E8a_E9a	KnownJunction	0	7.61	0.00	10.98	3.36	39.95	0.00	5.42
36	ER9a	ExonRegion	0	11.32	6.14	18.18	8.66	35.71	8.68	8.47
37	E9_Da	KnownBoundary	0	16.01	13.74	18.60	12.03	30.06	16.78	8.97
38	ER9b	ExonRegion	0	0.93	0.52	1.44	1.04	3.31	0.46	0.76
39	ER9c	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00