Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	SEMA4D	Gene	0	11.82	14.06	27.68	13.00	140.01	10.55	4.16
2	356444	Transcript	0	1.18	0.00	0.82	0.00	14.86	0.00	0.00
3	343780	Transcript	0	0	0	0	0	0	0	0
4	ER1a	ExonRegion	0	0.55	0.00	0.78	0.00	19.94	0.00	0.00
5	E1a_E2a	KnownJunction	0	1.82	0.00	0.86	0.00	9.77	0.00	0.00
6	E1a_E3a	NovelJunction	0	3.07	2.60	4.33	8.10	16.41	0.00	2.92
7	E1a_E4a	NovelJunction	0	2.59	7.22	6.50	5.28	26.16	0.00	0.00
8	I1	Intron	0	7.77	10.73	26.16	24.84	37.48	15.46	10.47
9	I1_AR3	ActiveIntronRegion	1	33.27	59.00	122.56	141.60	165.84	89.99	57.38
10	I1_SR2	SilentIntronRegion	0	23.35	17.50	70.11	33.12	109.01	19.80	18.22
11	ER2a	ExonRegion	0	3.15	0.00	3.36	0.00	9.96	0.21	0.05
12	E2a_E3a	KnownJunction	0	1.84	0.00	2.96	0.00	13.23	1.18	0.00
13	ER3a	ExonRegion	0	1.94	1.06	6.81	1.19	19.83	3.27	1.33
14	E3a_E4a	KnownJunction	0	1.59	4.05	8.72	3.17	20.36	2.92	3.01
15	ER4a	ExonRegion	0	7.37	18.37	16.81	9.34	73.62	14.20	2.19
16	E4a_E5a	KnownJunction	0	10.63	21.25	25.75	15.23	114.71	7.37	1.43
17	ER5a	ExonRegion	0	8.37	17.82	28.15	16.08	102.17	14.81	3.48
18	E5a_E6a	KnownJunction	0	8.61	18.65	27.55	16.63	128.17	14.53	4.83
19	ER6a	ExonRegion	0	9.49	21.10	29.34	14.29	167.55	7.41	6.51
20	E6a_E7a	KnownJunction	0	6.93	17.00	28.32	15.93	228.25	4.45	5.42
21	ER7a	ExonRegion	0	9.97	16.76	40.96	16.90	178.52	9.91	6.34
22	E7a_E8a	KnownJunction	0	13.84	17.68	40.96	9.24	184.03	7.99	8.05
23	ER8a	ExonRegion	0	14.59	16.79	39.79	10.93	188.88	7.93	4.69
24	E8a_E9a	KnownJunction	0	17.67	14.53	38.46	19.67	188.85	14.69	4.47
25	ER9a	ExonRegion	0	14.38	19.57	37.02	14.65	186.07	10.45	5.28
26	E9a_E10a	KnownJunction	0	13.69	24.70	42.08	23.08	119.11	15.76	5.26
27	ER10a	ExonRegion	0	10.66	23.40	31.13	17.98	119.79	9.33	2.92
28	E10a_E11a	KnownJunction	0	7.99	11.03	28.88	9.10	95.21	8.23	3.57
29	ER11a	ExonRegion	0	8.37	14.65	27.14	12.27	116.53	9.11	2.72
30	E11a_E12a	KnownJunction	0	4.91	8.35	24.04	9.27	131.03	12.54	2.68
31	ER12a	ExonRegion	0	9.19	14.97	20.05	16.28	117.18	11.67	4.70
32	E12a_E13a	KnownJunction	0	6.18	11.93	25.41	19.86	81.24	6.14	3.87
33	ER13a	ExonRegion	0	10.58	13.76	29.23	21.93	150.96	15.86	6.80
34	E13a_E14a	KnownJunction	0	8.23	9.80	22.32	16.90	122.02	11.07	6.85
35	ER14a	ExonRegion	0	4.81	15.44	21.55	12.97	116.58	10.67	6.35
36	E14a_E15a	KnownJunction	1	0.75	5.78	9.84	4.47	122.62	10.05	5.09
37	E15_Aa	NovelBoundary	0	2.95	4.65	10.98	6.66	6.13	4.18	0.00
38	ER15a	ExonRegion	0	5.07	9.85	16.45	9.37	84.08	6.87	4.25
39	E15a_E16a	KnownJunction	0	3.81	9.98	12.67	7.37	54.82	1.63	1.20
40	E16_Aa	NovelBoundary	0	3.35	0.00	10.78	3.82	3.23	1.66	0.69
41	ER16a	ExonRegion	0	9.43	10.66	20.15	7.20	92.62	5.15	1.69
42	E16a_E17a	KnownJunction	0	16.02	8.56	23.65	4.80	104.43	5.39	2.18
43	ER17a	ExonRegion	0	14.91	13.34	31.20	13.30	165.66	10.76	4.42
44	IG12_AR2	ActiveIntergenicRegion	0	9.09	12.99	7.36	6.65	6.63	9.73	2.49