Order SeqName SeqType IsAE Lum_Epi Lum_Epi2 Myo_Epi Myo_Epi2 hESCs StemLike vHMECs 1 C9orf155 Gene 0 136.59 96.70 37.41 30.14 409.71 70.50 75.56 2 388711 Transcript 0 3.73 3.71 0.00 0.00 11.86 0.43 0.81 3 257504 Transcript 0 0 0 0 0 0 0 0 4 388712 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5 376023 Transcript 0 0 0 0 0 0 0 0 6 376009 Transcript 0 8.55 16.46 5.73 14.42 6.37 18.63 4.22 7 ER1a ExonRegion 0 3.73 3.71 0.00 0.00 11.86 0.43 0.81 8 ER1b ExonRegion 1 19.40 22.01 1.80 2.29 12.36 15.62 4.01 9 E1a_E3a KnownJunction 1 6.93 10.75 0.00 0.00 6.45 4.37 2.77 10 ER2a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11 ER2b ExonRegion 0 3.87 4.03 0.24 1.35 25.00 1.93 5.68 12 E2a_E3a KnownJunction 0 0.68 9.85 0.00 5.80 9.34 6.54 3.97 13 ER3a ExonRegion 1 43.96 78.94 6.53 6.73 109.43 37.75 33.46 14 E3a_E4a KnownJunction 1 56.86 91.08 9.48 8.34 209.78 56.41 44.41 15 ER4a ExonRegion 1 70.70 120.32 12.45 8.24 322.31 63.00 67.82 16 E4a_E5b KnownJunction 1 129.08 143.91 17.99 1.68 445.10 53.89 95.06 17 E4a_E6a NovelJunction 0 1.97 5.60 0.00 4.14 0.00 11.18 0.00 18 E4b_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 19 ER4b ExonRegion 0 0.00 2.86 0.00 0.00 0.00 0.00 0.00 20 ER5a ExonRegion 0 7.37 8.86 1.12 0.37 27.82 3.68 6.47 21 ER5b ExonRegion 1 125.65 167.38 19.03 4.39 470.48 64.25 120.34 22 E5a_E6a KnownJunction 1 99.51 150.69 23.47 6.04 517.84 65.34 111.61 23 ER6a ExonRegion 1 145.73 172.51 20.77 12.75 669.95 104.90 130.57 24 E6a_E7a KnownJunction 1 151.24 182.77 19.92 17.58 816.62 99.19 132.41 25 E7_Aa NovelBoundary 0 2.74 7.33 1.52 9.54 2.97 6.19 1.63 26 ER7a ExonRegion 1 164.17 196.30 25.31 20.92 698.50 99.26 143.41 27 E7_Da NovelBoundary 0 8.33 19.39 2.26 8.53 3.09 20.39 0.85 28 E7a_E8a KnownJunction 1 155.23 190.42 17.12 19.97 590.18 86.08 117.00 29 I7_AR1 ActiveIntronRegion 0 10.41 19.11 4.45 8.75 3.03 16.89 3.79 30 E8_Aa NovelBoundary 0 9.93 28.90 4.53 18.61 3.34 17.47 4.74 31 ER8a ExonRegion 1 132.17 193.44 24.38 25.88 558.92 91.72 113.72 32 E8_Da NovelBoundary 0 6.28 10.25 5.55 9.83 0.99 16.99 4.08 33 E8a_E9a KnownJunction 1 119.52 132.17 19.74 7.04 470.35 70.46 80.49 34 E8a_E10a NovelJunction 0 2.59 4.83 0.76 1.16 1.01 7.85 4.70 35 ER9a ExonRegion 1 97.78 135.59 20.83 9.52 403.75 76.23 78.85 36 E9_Ab KnownBoundary 1 87.19 134.72 23.39 14.63 278.75 80.18 75.13 37 ER9b ExonRegion 0 111.44 125.08 21.38 24.25 425.92 80.51 84.17 38 E9_Da KnownBoundary 0 3.86 19.62 3.03 22.70 0.00 20.21 2.84 39 E9a_E10a KnownJunction 1 166.42 144.89 25.55 13.60 748.09 73.97 94.46 40 ER9c ExonRegion 0 8.55 16.46 5.73 14.42 6.37 18.63 4.22 41 E10_Aa NovelBoundary 0 6.66 15.76 6.93 14.71 2.05 20.13 2.85 42 ER10a ExonRegion 1 332.83 171.06 40.16 21.45 908.07 119.83 148.33 43 E10a_E11a KnownJunction 1 315.36 191.70 36.16 15.88 857.38 134.88 128.02 44 I10 Intron 0 9.18 7.20 5.36 8.47 5.73 11.29 4.71 45 I10_SR3 SilentIntronRegion 1 22.13 14.65 24.60 32.84 40.49 31.85 18.96 46 E11_Aa NovelBoundary 1 23.90 21.28 44.05 42.02 43.85 38.81 25.95 47 ER11a ExonRegion 0 269.63 145.68 81.40 57.62 761.89 118.31 132.79 48 ER11b ExonRegion 0 18.44 7.29 8.13 7.48 70.46 8.58 6.75 49 ER11c ExonRegion 0 7.84 5.59 5.15 5.24 27.37 5.15 4.45 50 IG22 Intergenic 0 25.16 20.25 30.63 22.60 33.41 17.56 24.05 51 IG22_AR2 ActiveIntergenicRegion 0 25.46 22.24 30.56 24.26 35.61 18.15 24.74 52 IG22_SR2 SilentIntergenicRegion 0 22.04 14.42 25.55 20.21 25.53 16.69 21.71 53 IG22_SR1 SilentIntergenicRegion 0 25.30 12.49 39.72 24.28 31.93 20.88 39.65 54 IG22_AR1 ActiveIntergenicRegion 0 24.26 11.80 31.24 13.47 23.27 13.80 18.35