Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	CBWD5	Gene	0	20.71	33.34	34.19	77.68	7.80	26.20	15.15
2	377389	Transcript	0	3.71	9.16	7.28	20.17	0.00	3.89	2.18
3	314367	Transcript	0	0	0	0	0	0	0	0
4	377395	Transcript	0	0.00	0.00	0.21	0.00	0.23	0.00	0.35
5	377380	Transcript	0	0	0	0	0	0	0	0
6	377384	Transcript	0	35.02	24.71	55.61	53.96	7.36	15.37	30.10
7	377400	Transcript	0	0	0	0	0	0	0	0
8	377392	Transcript	0	0	0	0	0	0	0	0
9	ER1a	ExonRegion	0	3.71	9.16	7.28	20.17	0.00	3.89	2.18
10	E1_Ab	KnownBoundary	1	2.84	0.00	7.01	2.84	0.00	10.32	2.38
11	E1_Ac	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
12	E1_Ad	KnownBoundary	0	3.79	1.55	6.83	7.72	0.00	3.06	2.42
13	ER1b	ExonRegion	0	5.38	13.36	13.55	32.42	0.00	9.40	2.70
14	ER1c	ExonRegion	0	5.38	13.36	13.55	32.42	0.00	9.81	2.70
15	ER1d	ExonRegion	0	18.98	49.36	34.56	139.00	0.30	37.41	10.37
16	E1_Ae	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
17	ER1e	ExonRegion	0	36.15	190.82	70.03	421.41	18.87	132.55	34.25
18	E1a_E2a	KnownJunction	0	2.39	2.71	4.71	2.87	0.00	0.00	0.60
19	E1a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
20	ER2a	ExonRegion	0	4.03	2.45	5.83	4.33	0.05	1.23	0.67
21	E2_Ab	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
22	ER2b	ExonRegion	0	1.45	1.48	2.35	1.86	0.81	0.46	0.27
23	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
24	ER3a	ExonRegion	0	54.04	49.91	103.59	180.74	57.12	64.58	49.83
25	E3a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
26	ER4a	ExonRegion	0	30.17	24.30	34.34	83.41	18.18	35.54	13.79
27	E4_Da	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
28	E4a_E5a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
29	ER4b	ExonRegion	0	20.63	26.32	27.03	42.12	3.47	15.02	13.11
30	E4_Db	KnownBoundary	0	4.82	11.82	9.47	12.65	3.53	3.32	4.33
31	ER4c	ExonRegion	0	35.02	24.71	55.61	53.96	7.36	15.37	30.10
32	E4_Dc	NovelBoundary	0	20.58	12.79	29.69	12.54	9.20	2.87	27.70
33	ER5a	ExonRegion	0	48.95	79.28	67.58	199.79	13.64	83.14	19.01
34	E5a_E6a	KnownJunction	1	120.07	175.91	130.76	376.21	51.27	161.39	39.88
35	ER6a	ExonRegion	0	66.65	82.93	82.46	225.68	28.70	94.65	28.27
36	E6a_E7a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
37	ER7a	ExonRegion	0	14.58	32.39	23.94	67.43	0.60	23.07	8.75
38	E7a_E8a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
39	ER8a	ExonRegion	0	38.80	43.01	90.77	100.63	14.42	40.74	24.04
40	E8a_E9a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
41	E8a_E10a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
42	ER9a	ExonRegion	1	4.65	14.10	16.07	37.72	2.22	13.56	1.02
43	E9a_E10a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
44	ER10a	ExonRegion	1	32.14	32.40	77.19	90.58	16.59	29.70	16.76
45	E10a_E11a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
46	E10a_E12a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
47	ER11a	ExonRegion	0	0.98	7.23	1.78	13.21	2.88	4.39	1.89
48	E11a_E12a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
49	ER12a	ExonRegion	0	14.59	21.21	39.77	50.07	2.32	12.24	10.09
50	E12a_E13a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
51	ER13a	ExonRegion	0	5.42	3.63	12.90	11.73	5.02	5.05	6.40
52	E13a_E14a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
53	ER14a	ExonRegion	0	1.75	0.00	5.97	1.44	1.48	1.50	0.80
54	E14a_E15a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
55	ER15a	ExonRegion	0	0.00	0.00	0.18	0.00	0.27	0.01	0.12
56	E15a_E16a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
57	ER16a	ExonRegion	0	0.00	0.00	0.00	0.58	0.00	0.00	0.00
58	E16_Da	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
59	E16_Db	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
60	E16_Dc	KnownBoundary	0	16.64	10.80	37.69	45.84	1.04	15.03	17.99
61	ER16b	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
62	ER16c	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
63	ER16d	ExonRegion	0	0.00	0.00	0.42	0.00	0.45	0.00	0.69