Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	FBXO10	Gene	0	18.28	23.69	29.09	24.26	50.91	22.71	22.85
2	276960	Transcript	0	9.39	17.75	20.42	13.09	48.39	15.42	21.95
3	IG36	Intergenic	0	3.20	3.13	3.94	3.07	7.53	1.68	4.93
4	IG36_SR4	SilentIntergenicRegion	0	5.18	2.94	4.76	5.31	10.87	1.39	4.01
5	IG36_AR2	ActiveIntergenicRegion	0	4.85	5.31	6.22	5.26	13.08	2.85	7.89
6	ER1a	ExonRegion	0	0.00	1.92	0.00	0.00	1.85	0.00	1.08
7	E1a_E2a	KnownJunction	0	0.00	2.73	0.00	0.00	5.07	0.00	1.71
8	ER2a	ExonRegion	1	4.78	16.44	20.08	10.01	45.20	15.82	22.05
9	E2a_E3a	KnownJunction	1	8.14	26.93	19.24	10.76	74.67	22.08	31.14
10	ER3a	ExonRegion	0	8.14	18.43	25.48	11.67	55.58	14.41	22.63
11	E3a_E4a	KnownJunction	1	8.23	13.74	31.77	11.00	73.03	23.93	23.95
12	I3_AR1	ActiveIntronRegion	0	1.81	2.92	1.49	0.00	11.40	0.58	2.58
13	I3_SR1	SilentIntronRegion	0	2.03	4.83	1.90	4.18	12.12	4.21	3.40
14	ER4a	ExonRegion	1	3.99	11.47	16.83	12.36	48.92	13.05	20.68
15	E4_Da	NovelBoundary	0	4.76	5.04	8.68	11.54	17.22	4.58	8.48
16	E4a_E5a	KnownJunction	0	1.02	0.00	6.77	0.00	0.00	4.82	5.89
17	I4	Intron	0	4.05	6.82	2.68	8.25	1.21	8.18	1.56
18	I4_AR1	ActiveIntronRegion	0	7.04	16.15	5.68	21.21	1.09	18.49	2.75
19	E5_Aa	NovelBoundary	1	15.27	17.26	7.82	51.53	0.00	23.10	2.29
20	ER5a	ExonRegion	0	10.34	27.96	13.92	21.08	54.43	18.15	22.11
21	E5_Da	NovelBoundary	1	12.30	22.59	7.08	33.32	1.94	19.86	0.00
22	E5a_E6a	KnownJunction	1	4.52	23.49	11.34	8.07	53.90	6.97	26.48
23	I5	Intron	0	8.69	8.75	2.47	10.82	0.71	8.47	0.71
24	I5_AR2	ActiveIntronRegion	0	3.07	6.07	4.06	11.14	0.81	9.58	0.97
25	I5_SR1	SilentIntronRegion	0	8.83	8.83	2.45	10.88	0.72	8.50	0.72
26	E6_Aa	NovelBoundary	1	9.03	7.22	2.16	12.60	1.15	2.28	0.89
27	ER6a	ExonRegion	1	8.34	22.30	25.47	8.75	61.90	9.64	29.52
28	E6_Da	NovelBoundary	0	3.50	10.06	4.12	7.40	0.00	6.70	0.63
29	E6a_E7a	KnownJunction	1	9.48	19.81	33.31	8.94	78.73	12.70	29.11
30	I6	Intron	0	3.03	6.47	1.64	9.71	0.14	4.95	0.18
31	I6_SR1	SilentIntronRegion	0	3.04	6.49	1.64	9.75	0.14	4.97	0.18
32	E7_Aa	NovelBoundary	1	13.59	14.45	4.40	20.91	0.95	7.50	0.79
33	ER7a	ExonRegion	0	12.86	31.55	24.62	23.37	62.77	25.40	30.41
34	E7_Da	NovelBoundary	0	5.96	13.66	4.74	18.15	3.53	7.75	3.12
35	E7a_E8a	KnownJunction	1	8.58	15.97	17.13	5.45	59.02	12.76	31.43
36	I7	Intron	1	12.64	15.33	4.53	17.76	5.37	8.73	4.43
37	I7_SR1	SilentIntronRegion	1	17.47	18.53	4.63	19.51	5.99	10.73	3.58
38	I7_AR1	ActiveIntronRegion	1	22.31	22.79	6.07	17.69	6.19	6.79	5.48
39	I7_SR2	SilentIntronRegion	1	5.94	10.76	4.24	19.39	4.88	8.88	5.08
40	E8_Aa	NovelBoundary	0	6.31	24.96	6.02	16.23	5.19	14.45	6.38
41	ER8a	ExonRegion	0	11.40	23.88	18.33	17.85	56.06	24.50	25.39
42	E8_Da	NovelBoundary	0	5.56	6.57	1.68	10.70	3.14	9.38	2.28
43	E8a_E9a	KnownJunction	1	4.59	11.51	17.20	5.12	43.39	9.38	14.70
44	I8	Intron	1	10.83	13.82	4.37	16.70	2.97	11.26	2.52
45	I8_AR1	ActiveIntronRegion	0	7.75	12.42	2.76	12.94	2.29	9.78	2.51
46	I8_AR4	ActiveIntronRegion	0	10.38	20.97	4.84	18.21	5.15	14.88	3.94
47	I8_SR2	SilentIntronRegion	1	16.89	15.52	7.05	23.32	3.25	14.37	2.43
48	E9_Aa	NovelBoundary	1	14.29	21.70	4.47	26.66	3.04	27.50	3.60
49	ER9a	ExonRegion	0	15.10	19.93	26.57	27.29	47.39	31.52	25.08
50	E9_Da	NovelBoundary	0	4.06	30.66	5.03	11.73	1.98	16.99	2.82
51	E9a_E10a	KnownJunction	1	7.73	8.35	17.53	11.51	29.16	7.83	23.85
52	I9	Intron	0	9.29	10.99	6.04	15.04	6.39	6.90	2.03
53	I9_SR1	SilentIntronRegion	0	9.32	11.01	6.06	15.08	6.41	6.92	2.04
54	E10_Aa	NovelBoundary	1	22.63	34.26	13.62	52.91	19.41	11.12	3.32
55	ER10a	ExonRegion	0	31.95	33.14	42.34	37.40	59.30	31.18	27.26
56	E10_Da	NovelBoundary	1	24.82	27.64	15.25	38.82	12.22	16.00	7.09
57	E10a_E11a	KnownJunction	1	7.49	14.61	23.22	8.07	56.59	11.55	24.72
58	I10	Intron	0	18.02	12.33	11.43	22.03	7.43	11.55	3.33
59	I10_AR1	ActiveIntronRegion	1	11.70	9.26	5.18	16.72	8.36	5.21	2.05
60	I10_SR1	SilentIntronRegion	1	14.92	12.83	9.29	26.52	6.18	10.36	3.30
61	I10_AR2	ActiveIntronRegion	0	26.94	17.46	21.21	25.27	12.44	21.83	4.90
62	I10_SR2	SilentIntronRegion	0	8.97	4.19	9.10	8.50	6.11	9.01	1.19
63	I10_AR5	ActiveIntronRegion	1	31.21	10.45	12.92	14.95	3.44	7.69	3.87
64	E11_Aa	NovelBoundary	1	27.12	19.65	19.62	36.11	5.35	12.46	6.08
65	ER11a	ExonRegion	0	30.51	28.69	37.70	36.19	49.26	28.05	21.86
66	IG35	Intergenic	0	66.61	55.95	94.62	112.62	60.74	27.92	28.73
67	IG35_SR3	SilentIntergenicRegion	0	33.70	21.12	26.72	28.89	3.80	11.95	5.15
68	IG35_AR2	ActiveIntergenicRegion	0	77.84	64.54	108.02	138.79	72.32	33.15	33.42
69	IG35_SR2	SilentIntergenicRegion	0	53.77	37.42	81.92	67.45	40.36	20.15	19.15
70	IG35_AR1	ActiveIntergenicRegion	0	69.04	66.02	105.25	118.00	69.19	26.80	34.32
71	IG35_SR1	SilentIntergenicRegion	0	40.24	31.47	75.75	60.44	45.45	20.70	19.36