Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	PTPRD	Gene	0	0.12	0.04	1.45	0.33	77.14	7.76	0.03
2	381196	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
3	346816	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
4	358503	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
5	356435	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
6	397606	Transcript	0	0.00	0.00	0.00	0.00	4.33	0.00	0.00
7	397617	Transcript	0	0	0	0	0	0	0	0
8	360074	Transcript	0	0.00	0.00	1.51	0.00	47.17	14.26	0.00
9	397611	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
10	355233	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
11	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
12	E1a_E2b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
13	ER2a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	2.45	0.00
14	ER2b	ExonRegion	0	0.00	0.00	0.57	0.00	14.57	7.96	0.00
15	E2a_E3a	KnownJunction	0	0.00	0.00	0.63	0.00	30.73	15.41	0.00
16	ER3a	ExonRegion	0	0.00	0.00	1.01	0.21	25.84	5.53	0.35
17	E3a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
18	ER4a	ExonRegion	0	0.00	0.00	1.87	0.45	34.52	5.79	0.36
19	E4a_E5a	KnownJunction	0	0.00	0.00	1.48	0.00	50.07	6.22	0.00
20	ER5a	ExonRegion	0	0.00	0.00	2.68	0.50	55.58	7.60	0.00
21	E5a_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
22	E5a_E8a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
23	E5a_E10a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
24	E5a_E10c	KnownJunction	0	0.00	0.00	1.51	0.00	47.17	14.26	0.00
25	E5b_E9a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
26	ER5b	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
27	E6a_E7a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
28	ER6a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
29	E7a_E10c	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
30	ER7a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
31	E8a_E10b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
32	ER8a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
33	ER9a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
34	ER10a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
35	ER10b	ExonRegion	0	0.00	0.00	0.17	0.00	6.18	1.69	0.00
36	ER10c	ExonRegion	0	0.00	0.00	2.18	0.97	52.63	9.73	0.00
37	E10a_E11a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
38	E10a_E12a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
39	E10a_E13a	KnownJunction	0	0.00	0.00	0.88	1.11	95.55	14.26	0.00
40	E11a_E13a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
41	ER11a	ExonRegion	0	0.00	0.00	0.00	0.00	0.27	0.00	0.00
42	E12a_E13a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
43	ER12a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
44	ER13a	ExonRegion	0	0.00	0.00	1.17	0.66	69.48	7.78	0.00
45	E13a_E14a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
46	ER14a	ExonRegion	0	0.30	0.00	1.16	0.32	57.93	7.52	0.00
47	E14a_E15a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
48	ER15a	ExonRegion	0	1.07	0.00	1.59	0.00	66.38	8.47	0.00
49	E15a_E16a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
50	ER16a	ExonRegion	0	0.22	0.00	1.08	0.00	72.02	10.29	0.09
51	E16a_E17a	KnownJunction	0	0.00	0.00	0.60	0.00	74.21	9.30	0.72
52	E16a_E21a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
53	E16a_E23a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
54	ER17a	ExonRegion	0	0.00	0.00	1.82	0.00	73.65	7.04	0.29
55	E17a_E18a	KnownJunction	0	0.00	0.00	2.34	0.00	60.14	4.90	0.00
56	ER18a	ExonRegion	0	0.00	0.00	3.13	0.00	81.07	9.57	0.00
57	E18a_E19a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
58	E18a_E20a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
59	E19a_E20a	KnownJunction	0	0.00	0.00	5.63	0.00	53.11	13.80	0.00
60	ER19a	ExonRegion	0	0.00	0.00	5.62	0.00	55.28	18.89	0.00
61	ER20a	ExonRegion	0	0.00	0.00	3.54	0.81	78.82	17.61	0.00
62	E20a_E22a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
63	E21a_E25a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
64	E21a_E28a	NovelJunction	0	0.00	0.00	0.00	0.00	12.15	1.34	0.00
65	ER21a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
66	ER22a	ExonRegion	0	0.21	0.07	2.14	0.85	66.44	12.20	0.00
67	E22a_E23a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
68	ER23a	ExonRegion	0	1.11	1.14	1.71	1.17	77.65	7.18	0.00
69	E23a_E24a	KnownJunction	0	0.00	1.44	2.34	2.60	83.98	7.93	0.00
70	ER24a	ExonRegion	0	0.46	0.11	1.50	2.73	87.52	8.40	0.00
71	E24a_E25a	KnownJunction	0	0.00	0.00	2.63	0.00	92.49	5.52	0.00
72	ER25a	ExonRegion	0	0.00	0.00	2.77	0.00	92.44	14.46	0.00
73	E25a_E26a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
74	ER26a	ExonRegion	0	0.00	0.00	2.24	0.00	118.17	11.98	0.00
75	E26a_E27a	KnownJunction	0	0.00	0.00	0.89	0.00	150.54	7.99	0.00
76	ER27a	ExonRegion	0	0.09	0.00	1.11	0.59	92.66	7.77	0.00
77	E27a_E28a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
78	E27a_E29a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
79	E27a_E30b	KnownJunction	0	0.82	0.00	0.00	0.00	60.70	3.78	0.00
80	E28a_E30a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
81	ER28a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
82	E29a_E30a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
83	ER29a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
84	ER30a	ExonRegion	0	0.09	0.00	0.00	0.00	6.93	0.54	0.00
85	ER30b	ExonRegion	0	0.39	0.00	0.77	0.85	95.51	3.83	0.00
86	E30a_E31a	KnownJunction	0	0.00	0.00	0.00	0.00	7.72	0.00	0.00
87	E30a_E32a	KnownJunction	0	0.00	0.00	0.00	0.00	53.76	2.60	0.00
88	ER31a	ExonRegion	0	0.00	0.00	0.00	0.00	7.83	0.00	0.00
89	E31a_E32a	KnownJunction	0	0.00	0.00	0.00	0.00	6.11	0.00	0.00
90	ER32a	ExonRegion	0	0.45	0.00	0.55	0.18	69.91	6.43	0.00
91	E32a_E33a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
92	ER33a	ExonRegion	0	0.57	0.00	1.88	1.39	71.97	7.68	0.00
93	E33a_E34a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
94	ER34a	ExonRegion	0	0.34	0.00	1.95	0.18	98.83	9.38	0.00
95	E34a_E35a	KnownJunction	0	0.00	0.00	0.00	1.52	109.78	19.59	0.00
96	ER35a	ExonRegion	0	0.00	0.00	1.71	0.53	101.33	13.32	0.00
97	E35a_E36a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
98	ER36a	ExonRegion	0	0.00	0.00	2.05	0.61	102.80	12.25	0.00
99	E36a_E37a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
100	ER37a	ExonRegion	0	0.14	0.00	1.57	0.33	110.83	10.32	0.00
101	E37a_E38a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
102	ER38a	ExonRegion	0	0.22	0.00	2.40	0.00	127.32	4.03	0.00
103	E38a_E39a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
104	ER39a	ExonRegion	0	0.00	0.00	1.35	0.00	109.46	8.99	0.00
105	E39a_E40a	KnownJunction	0	0.00	0.00	4.15	0.00	108.90	11.77	0.00
106	ER40a	ExonRegion	0	0.00	0.00	1.67	0.00	105.67	11.16	0.00
107	E40a_E41a	KnownJunction	0	0.00	0.00	0.00	0.00	76.26	13.99	0.00
108	ER41a	ExonRegion	0	0.00	0.00	0.75	0.49	120.17	16.91	0.00
109	E41a_E42a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
110	ER42a	ExonRegion	0	0.00	0.00	2.17	0.83	89.95	17.89	0.00
111	E42a_E43a	KnownJunction	0	0.00	0.00	0.00	0.00	91.64	19.16	0.00
112	ER43a	ExonRegion	0	0.03	0.05	1.08	0.08	79.11	5.42	0.01