Order SeqName SeqType IsAE Lum_Epi Lum_Epi2 Myo_Epi Myo_Epi2 hESCs StemLike vHMECs 1 ACO1 Gene 0 126.71 40.11 173.14 72.95 305.53 215.54 125.02 2 379921 Transcript 0 34.46 0.00 31.18 0.00 0.00 0.00 0.00 3 379923 Transcript 0 3.91 0.30 4.08 2.15 2.82 4.02 1.67 4 309951 Transcript 0 0 0 0 0 0 0 0 5 ER1a ExonRegion 0 7.99 3.53 3.96 1.25 41.72 3.42 2.78 6 E1_Ab KnownBoundary 0 16.72 8.83 10.02 2.28 108.21 6.46 6.99 7 ER1b ExonRegion 1 67.96 13.10 67.75 28.12 134.93 51.96 32.14 8 E1a_E2a KnownJunction 0 1.70 0.00 3.42 1.68 1.13 4.69 0.86 9 E1a_E3a KnownJunction 0 63.99 14.00 95.98 28.36 81.33 94.95 37.26 10 ER2a ExonRegion 0 3.02 0.00 3.02 1.74 0.24 4.54 0.75 11 E2a_E3a KnownJunction 0 3.62 0.00 2.76 2.68 0.00 3.46 0.86 12 ER3a ExonRegion 0 62.88 22.52 76.61 45.88 69.01 118.60 43.00 13 E3a_E4a KnownJunction 1 128.21 16.03 162.80 62.91 180.55 174.04 71.30 14 ER4a ExonRegion 0 104.34 29.91 160.10 56.25 235.29 185.52 93.37 15 E4a_E5a KnownJunction 0 85.52 43.43 164.86 52.42 148.83 242.70 94.21 16 ER5a ExonRegion 0 119.70 50.58 207.99 64.31 187.36 227.11 112.89 17 E5a_E6a KnownJunction 0 152.70 42.85 265.77 73.36 221.15 244.31 116.30 18 ER6a ExonRegion 0 146.65 42.61 272.13 63.42 260.67 217.35 120.04 19 E6a_E7a KnownJunction 0 126.16 35.31 249.64 59.38 205.35 186.45 108.72 20 ER7a ExonRegion 0 110.39 45.34 206.90 65.55 240.16 188.70 123.67 21 E7a_E8a KnownJunction 0 71.22 37.99 151.55 57.16 170.22 176.74 93.99 22 ER8a ExonRegion 0 81.87 52.24 148.61 80.07 245.85 217.55 130.04 23 E8a_E9a KnownJunction 0 126.39 43.51 187.48 72.66 267.90 214.37 149.94 24 ER9a ExonRegion 0 125.48 55.33 210.62 72.27 288.53 197.03 144.31 25 E9a_E10a KnownJunction 0 129.08 47.66 229.64 65.83 260.27 178.59 118.74 26 ER10a ExonRegion 0 152.87 42.47 280.36 76.52 430.34 188.77 158.82 27 E10a_E11a KnownJunction 0 125.34 43.11 282.03 75.91 325.02 199.85 142.00 28 ER11a ExonRegion 0 145.40 36.98 242.16 80.31 385.42 225.91 146.26 29 E11a_E12a KnownJunction 0 165.08 42.80 258.09 98.21 401.19 224.90 167.78 30 ER12a ExonRegion 0 161.88 60.11 270.08 116.38 530.46 293.22 217.41 31 E12_Da KnownBoundary 0 141.73 65.36 203.81 124.35 470.51 264.25 193.46 32 E12a_E22b KnownJunction 0 34.46 0.00 31.18 0.00 0.00 0.00 0.00 33 ER12b ExonRegion 0 128.93 63.62 185.41 110.86 468.41 276.89 194.00 34 E12b_E13a KnownJunction 0 133.60 56.27 186.44 105.93 469.45 296.89 201.66 35 ER13a ExonRegion 0 151.56 59.04 220.55 122.94 548.53 294.64 259.51 36 E13a_E14a KnownJunction 0 98.60 54.43 158.27 104.60 416.98 318.09 227.94 37 ER14a ExonRegion 0 97.71 54.74 140.52 91.79 366.07 234.58 173.10 38 E14a_E15a KnownJunction 0 147.26 48.37 160.29 87.80 361.49 229.46 193.55 39 ER15a ExonRegion 0 158.99 43.16 216.68 95.79 504.48 252.65 197.73 40 E15a_E16a KnownJunction 0 228.25 52.83 260.40 96.42 575.61 220.56 163.68 41 ER16a ExonRegion 0 247.52 47.97 319.32 102.68 426.45 316.42 188.23 42 E16a_E17a KnownJunction 0 172.64 49.73 224.54 101.86 425.32 278.99 137.81 43 ER17a ExonRegion 0 327.42 57.72 376.75 116.17 607.27 357.58 222.28 44 E17a_E18a KnownJunction 0 327.12 49.89 343.41 132.72 851.92 378.76 167.91 45 ER18a ExonRegion 0 258.71 62.52 252.65 91.06 481.63 292.16 148.28 46 E18a_E19a KnownJunction 0 184.54 50.07 177.04 91.03 393.63 267.41 133.86 47 ER19a ExonRegion 0 176.01 42.77 149.53 66.37 347.75 243.72 115.66 48 E19a_E20a KnownJunction 0 93.33 31.66 105.15 71.90 339.34 185.99 114.41 49 ER20a ExonRegion 0 76.84 35.76 82.18 67.79 269.23 194.15 103.73 50 E20a_E21a KnownJunction 0 56.14 31.16 85.59 64.34 272.85 175.78 91.21 51 ER21a ExonRegion 0 85.23 27.49 103.74 74.20 280.94 221.57 102.99 52 E21a_E22a KnownJunction 1 83.17 16.89 99.99 78.00 245.51 216.01 103.92 53 I21_AR3 ActiveIntronRegion 0 12.36 8.34 2.68 5.50 3.75 2.45 2.88 54 I21_AR4 ActiveIntronRegion 1 8.88 9.85 4.21 4.99 2.16 1.23 3.07 55 ER22a ExonRegion 0 74.77 24.52 86.63 71.98 218.21 179.71 71.06 56 E22_Ab KnownBoundary 0 85.17 19.55 86.54 52.45 205.38 173.21 73.89 57 ER22b ExonRegion 0 118.60 37.38 150.22 66.55 265.38 240.85 104.88 58 E22_Da KnownBoundary 0 30.56 9.80 54.88 21.13 65.86 75.25 30.41 59 ER22c ExonRegion 0 28.78 9.08 30.41 10.23 42.34 49.65 19.44 60 ER22d ExonRegion 0 7.30 1.21 7.11 2.49 9.92 3.37 4.22 61 IG11 Intergenic 0 10.07 2.94 14.33 5.43 8.92 13.25 7.20 62 IG11_AR1 ActiveIntergenicRegion 0 24.67 2.29 22.33 8.21 22.00 10.97 8.87 63 IG11_SR2 SilentIntergenicRegion 0 6.46 2.04 10.31 3.40 7.27 11.10 4.34 64 IG11_AR5 ActiveIntergenicRegion 0 9.19 4.03 15.82 6.57 7.59 16.03 9.40