Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	CNTLN	Gene	0	3.26	0.65	9.29	1.17	46.58	2.45	5.53
2	380643	Transcript	0	0.16	0.54	0.67	0.01	6.91	0.64	2.22
3	262360	Transcript	0	0.00	0.00	0.26	0.00	1.24	0.00	0.26
4	380647	Transcript	0	2.60	0.00	5.30	0.28	67.68	1.26	5.12
5	380641	Transcript	0	8.14	2.97	10.95	3.03	31.49	2.68	5.21
6	ER1a	ExonRegion	0	0.00	0.00	0.16	0.02	3.12	0.00	1.20
7	E1_Ab	KnownBoundary	0	0.00	0.00	0.00	0.00	1.11	0.00	0.89
8	E1_Ac	KnownBoundary	0	0.00	0.00	0.68	0.00	2.28	0.00	0.75
9	ER1b	ExonRegion	0	0.00	0.00	0.68	1.25	9.52	0.00	3.04
10	ER1c	ExonRegion	0	0.87	0.56	3.74	1.68	19.93	2.08	4.17
11	E1a_E2a	KnownJunction	0	6.33	1.50	15.33	0.00	44.81	3.73	5.72
12	ER2a	ExonRegion	0	5.97	0.98	17.19	1.29	52.85	7.92	11.04
13	E2a_E3a	KnownJunction	0	0.00	1.26	0.00	0.00	9.54	1.13	2.35
14	E2a_E4a	KnownJunction	0	5.82	1.00	22.85	1.33	47.72	8.33	12.70
15	ER3a	ExonRegion	0	0.47	0.36	1.84	0.00	8.07	0.80	3.12
16	ER4a	ExonRegion	0	13.81	2.49	27.97	2.86	69.89	9.81	14.16
17	E4a_E5a	KnownJunction	0	14.57	2.44	31.89	6.56	103.09	14.63	15.16
18	ER5a	ExonRegion	0	12.44	4.44	30.93	3.99	100.25	9.00	10.19
19	E5a_E6a	KnownJunction	0	11.62	3.23	32.45	4.50	75.68	12.09	6.68
20	ER6a	ExonRegion	0	8.07	0.58	25.12	3.78	84.42	5.63	10.90
21	E6a_E7a	KnownJunction	0	8.36	0.00	26.97	1.52	79.56	4.66	12.81
22	ER7a	ExonRegion	0	5.58	0.00	22.61	3.35	65.60	4.51	12.17
23	E7a_E8a	KnownJunction	0	4.74	0.00	23.41	1.68	71.03	4.45	13.39
24	ER8a	ExonRegion	0	4.25	0.57	21.97	0.66	83.17	3.79	10.95
25	E8_Da	KnownBoundary	0	3.19	0.00	12.37	0.00	26.95	0.00	4.03
26	E8a_E9a	KnownJunction	0	1.00	0.00	14.70	1.68	72.85	0.00	3.25
27	ER8b	ExonRegion	0	8.14	2.97	10.95	3.03	31.49	2.68	5.21
28	E8_Db	NovelBoundary	0	0.82	7.01	1.11	8.86	0.85	3.91	3.25
29	I8_AR1	ActiveIntronRegion	0	2.22	0.44	11.88	0.00	31.06	1.33	6.33
30	I8_AR2	ActiveIntronRegion	0	0.21	0.56	3.45	0.00	11.20	0.00	3.57
31	I8_AR9	ActiveIntronRegion	0	1.63	0.55	3.41	0.37	21.23	1.02	3.92
32	ER9a	ExonRegion	0	3.93	0.47	15.37	4.97	72.22	0.96	5.68
33	E9a_E10a	KnownJunction	0	4.17	0.00	15.29	5.47	101.55	0.00	4.46
34	ER10a	ExonRegion	0	4.41	0.52	14.50	2.34	75.26	4.19	4.74
35	E10a_E11a	KnownJunction	0	2.55	0.00	11.68	1.19	78.22	6.49	6.78
36	ER11a	ExonRegion	0	3.26	0.86	10.36	1.63	58.91	5.13	8.58
37	E11a_E12a	KnownJunction	0	1.00	1.16	8.98	1.54	52.68	6.86	7.44
38	ER12a	ExonRegion	0	3.53	1.05	13.56	1.88	83.83	1.69	9.10
39	E12a_E13a	KnownJunction	0	5.41	1.63	21.40	1.33	79.16	3.08	8.73
40	ER13a	ExonRegion	0	3.71	0.34	17.88	1.45	62.86	0.98	5.81
41	E13a_E14a	KnownJunction	0	5.61	0.00	19.99	2.49	51.55	2.49	7.25
42	ER14a	ExonRegion	0	3.69	0.00	17.59	0.94	62.13	2.91	5.80
43	E14a_E15a	KnownJunction	0	2.15	0.00	8.91	1.68	32.80	3.75	3.17
44	ER15a	ExonRegion	0	3.22	0.67	10.45	1.91	44.26	2.60	3.51
45	E15a_E16a	KnownJunction	0	4.36	1.47	12.70	1.68	47.86	1.15	3.43
46	ER16a	ExonRegion	0	2.95	0.23	10.50	0.97	49.03	2.80	6.67
47	E16a_E17a	KnownJunction	0	2.07	0.00	11.14	1.00	34.46	0.00	5.47
48	ER17a	ExonRegion	0	2.29	0.00	15.10	0.88	71.03	0.92	7.72
49	E17a_E18a	KnownJunction	0	3.22	0.00	15.38	1.65	81.01	0.00	6.41
50	ER18a	ExonRegion	0	3.10	0.00	14.56	1.22	69.47	3.06	5.95
51	E18a_E19a	KnownJunction	0	1.85	0.00	16.09	1.22	68.01	1.15	5.39
52	ER19a	ExonRegion	0	2.89	0.00	12.16	0.08	54.69	0.79	5.82
53	E19a_E20a	KnownJunction	0	0.98	0.00	9.90	0.00	52.61	0.00	5.27
54	ER20a	ExonRegion	0	2.29	0.00	8.90	0.00	37.64	1.93	4.41
55	E20a_E21a	KnownJunction	0	3.82	0.00	6.45	0.00	28.72	6.08	2.82
56	ER21a	ExonRegion	0	2.63	0.00	6.53	0.00	42.86	3.85	5.13
57	E21a_E22a	KnownJunction	0	1.74	0.00	7.04	0.00	46.57	4.50	5.29
58	ER22a	ExonRegion	0	3.64	0.00	9.86	0.75	50.03	1.69	3.54
59	E22a_E23a	KnownJunction	0	3.02	0.00	9.63	0.00	39.51	1.50	7.04
60	ER23a	ExonRegion	0	2.03	0.67	8.86	0.00	60.09	3.44	5.83
61	E23a_E24a	KnownJunction	0	3.32	0.00	6.80	0.00	79.05	1.66	6.36
62	ER24a	ExonRegion	0	1.57	0.50	6.88	0.68	76.86	2.47	5.27
63	E24a_E25a	KnownJunction	0	0.90	0.00	5.33	2.38	67.18	1.34	4.13
64	ER25a	ExonRegion	0	3.92	0.00	8.21	0.84	67.61	3.87	3.48
65	E25a_E26a	KnownJunction	0	4.06	0.00	7.80	0.00	45.16	7.10	1.25
66	ER26a	ExonRegion	0	3.06	0.00	8.25	0.00	60.31	2.29	2.02
67	E26a_E27a	KnownJunction	0	0.00	0.00	0.52	0.00	0.00	0.00	0.00
68	E26a_E28a	KnownJunction	0	2.84	0.00	3.79	0.00	65.08	0.00	4.27
69	E27_Aa	NovelBoundary	0	10.98	6.12	12.88	14.87	1.18	12.92	3.88
70	ER27a	ExonRegion	0	0.00	0.00	0.01	0.00	2.47	0.00	0.52
71	E27_Da	NovelBoundary	0	377.61	212.01	261.14	189.31	685.78	147.35	260.14
72	ER28a	ExonRegion	0	2.37	0.00	6.80	0.55	70.28	2.51	5.96