Order SeqName SeqType IsAE Lum_Epi Lum_Epi2 Myo_Epi Myo_Epi2 hESCs StemLike vHMECs 1 YWHAZ Gene 0 2402.55 2653.87 1731.31 1449.76 2290.67 1567.30 3967.61 2 353245 Transcript 1 63.06 43.65 11.39 1.02 38.94 4.89 66.66 3 395957 Transcript 0 96.34 123.62 55.00 73.83 153.46 92.52 186.82 4 395958 Transcript 0 0 0 0 0 0 0 0 5 395953 Transcript 0 19.18 13.46 19.54 12.47 24.23 4.61 11.52 6 395956 Transcript 0 13.01 3.74 0.85 1.08 4.71 0.18 4.00 7 395948 Transcript 0 5.18 4.87 1.93 1.26 1.45 0.10 1.25 8 395951 Transcript 1 48.89 55.87 15.20 14.80 7.30 14.78 104.73 9 ER1a ExonRegion 0 51.67 31.40 9.23 0.46 49.08 5.22 58.08 10 E1a_E7a KnownJunction 0 74.45 55.91 13.55 1.57 28.79 4.56 75.24 11 ER2a ExonRegion 0 34.90 25.27 25.34 28.07 177.96 39.97 65.09 12 E2a_E3a KnownJunction 0 14.09 11.14 14.33 2.98 28.54 8.42 16.90 13 E2a_E7a NovelJunction 0 101.44 53.65 138.30 99.05 265.32 69.71 143.97 14 ER3a ExonRegion 0 36.27 54.68 25.76 46.80 49.34 28.54 83.25 15 E3_Ab KnownBoundary 0 58.65 113.81 45.27 64.40 48.87 30.71 192.11 16 ER3b ExonRegion 0 844.78 774.65 424.13 465.77 754.34 351.79 1062.45 17 E3a_E7a KnownJunction 0 1980.54 1427.56 1130.66 972.33 1752.18 928.96 1478.13 18 ER4a ExonRegion 0 19.18 13.46 19.54 12.47 24.23 4.61 11.52 19 ER5a ExonRegion 0 3.23 3.49 0.17 2.16 6.32 0.35 0.36 20 E5_Ab KnownBoundary 0 29.37 8.33 2.36 4.44 45.07 1.55 13.04 21 ER5b ExonRegion 0 23.48 10.07 1.35 3.13 17.13 0.78 5.18 22 E5_Da KnownBoundary 0 2.37 6.49 2.57 3.22 1.18 0.00 2.42 23 E5a_E7a KnownJunction 0 22.80 3.99 1.52 0.00 3.11 0.00 7.64 24 ER5c ExonRegion 0 2.98 5.48 1.37 1.22 0.83 0.20 0.39 25 E5b_E7a KnownJunction 0 7.38 4.26 2.50 1.30 2.07 0.00 2.11 26 ER6a ExonRegion 0 43.82 41.49 20.37 16.38 3.63 7.07 38.90 27 E6a_E7a KnownJunction 1 53.96 70.25 10.03 13.22 10.97 22.48 170.57 28 ER7a ExonRegion 0 2689.82 3646.38 2024.35 1919.76 1873.70 2054.73 3951.99 29 E7a_E8a KnownJunction 0 3672.24 6203.71 3406.17 3001.56 3310.20 3537.86 7140.92 30 ER8a ExonRegion 0 3513.99 5648.40 3083.16 2864.89 2827.81 3018.79 6872.33 31 E8a_E9a KnownJunction 0 3574.92 5353.67 2864.28 2694.83 4104.21 2552.70 6591.88 32 ER9a ExonRegion 0 3409.66 4820.02 2877.38 2632.47 3667.34 2527.31 7400.69 33 E9a_E10a KnownJunction 0 3412.86 4176.45 2578.46 2524.19 2846.24 2384.46 6126.71 34 ER10a ExonRegion 0 3728.60 4684.15 2959.54 2713.40 3550.42 2582.98 6771.53 35 E10a_E11a KnownJunction 0 3507.79 5773.75 2734.03 3107.46 3630.15 2803.79 6259.94 36 ER11a ExonRegion 0 4466.71 4560.69 3131.79 2519.87 3211.54 2439.97 5745.46 37 E11_Da KnownBoundary 0 3198.31 2630.80 2103.62 1539.61 1419.29 1544.01 3579.93 38 E11_Db KnownBoundary 0 1963.35 1852.32 1313.92 1135.63 2132.69 1094.88 2593.87 39 ER11b ExonRegion 0 4992.72 4397.68 3430.10 2555.13 2683.24 2487.45 6134.24 40 ER11c ExonRegion 0 4698.06 4274.88 3290.00 2430.16 3355.59 2371.82 5640.71 41 E11_Dc KnownBoundary 0 4184.60 3679.47 2923.04 1998.46 3601.89 1951.32 4344.04 42 ER11d ExonRegion 0 3069.35 3104.13 2137.45 1706.20 3126.41 1929.32 5068.93 43 E11_Dd KnownBoundary 0 183.62 420.53 114.98 231.47 170.34 275.26 437.11 44 E11_De KnownBoundary 0 223.26 289.12 116.70 164.42 166.72 203.38 339.10 45 ER11e ExonRegion 0 450.05 794.52 259.89 432.70 387.92 533.72 930.71 46 ER11f ExonRegion 0 300.09 403.38 154.56 217.46 358.01 293.17 582.04 47 IG6_SR7 SilentIntergenicRegion 0 7.52 1.32 5.83 2.01 3.45 0.85 16.54 48 IG6_SR6 SilentIntergenicRegion 0 42.48 9.35 20.39 11.48 17.24 8.52 68.84 49 IG6_AR9 ActiveIntergenicRegion 0 48.19 10.93 23.90 13.72 28.69 11.03 76.71 50 IG6_AR8 ActiveIntergenicRegion 0 21.19 17.65 17.10 13.45 8.49 12.72 40.18 51 IG6_AR4 ActiveIntergenicRegion 0 20.27 11.70 20.54 14.22 1.51 8.39 13.53 52 IG6_AR3 ActiveIntergenicRegion 0 10.13 14.03 12.86 28.74 0.54 14.79 9.53 53 IG6_SR2 SilentIntergenicRegion 0 14.22 22.93 15.58 40.53 0.81 21.91 12.82 54 IG6_AR2 ActiveIntergenicRegion 0 11.83 13.71 15.80 27.93 0.38 16.59 9.60