Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	NECAB1	Gene	0	0.42	0.23	38.97	25.77	59.98	33.99	20.94
2	242753	Transcript	0	0.08	0.01	2.10	1.88	28.78	3.43	1.08
3	IG31_AR1	ActiveIntergenicRegion	0	0.74	0.00	0.39	0.31	9.81	1.19	0.25
4	IG31_SR2	SilentIntergenicRegion	0	0.09	0.00	0.08	0.00	11.76	0.00	0.24
5	IG31_AR2	ActiveIntergenicRegion	0	0.09	0.00	0.24	0.10	15.65	0.05	0.29
6	IG31_SR3	SilentIntergenicRegion	0	0.20	0.00	0.00	0.33	8.76	0.00	0.00
7	IG31_AR3	ActiveIntergenicRegion	0	0.00	0.00	0.00	0.00	19.61	0.00	0.00
8	IG31_SR4	SilentIntergenicRegion	0	0.00	0.00	0.31	0.00	11.47	0.00	0.00
9	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	1.75	0.00	0.00
10	E1a_E2a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
11	ER2a	ExonRegion	0	0.00	0.00	0.00	0.00	7.34	2.14	0.00
12	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
13	E3a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
14	ER3a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
15	ER4a	ExonRegion	0	0.00	0.00	0.00	2.49	27.67	1.40	0.00
16	E4a_E5a	KnownJunction	0	0.00	0.00	0.00	0.00	24.44	1.63	0.00
17	E5a_E6a	KnownJunction	0	0.58	0.00	0.00	0.00	37.90	4.77	0.00
18	ER5a	ExonRegion	0	0.12	0.00	0.00	0.00	35.48	4.86	0.00
19	ER6a	ExonRegion	1	0.56	0.00	0.00	1.41	41.75	8.83	0.00
20	E6a_E7a	KnownJunction	0	0.00	0.00	0.00	1.68	54.70	2.39	0.00
21	ER7a	ExonRegion	0	0.00	0.00	0.74	1.77	39.07	3.59	0.35
22	E7a_E8a	KnownJunction	0	0.00	0.00	0.00	0.00	16.60	2.95	0.57
23	ER8a	ExonRegion	0	0.32	0.00	0.00	4.62	27.16	2.54	0.45
24	E8a_E9a	KnownJunction	0	0.00	0.00	0.00	0.00	19.92	0.00	0.00
25	ER9a	ExonRegion	0	0.00	0.00	0.00	2.04	22.18	0.00	0.00
26	E9a_E10a	KnownJunction	0	0.00	0.00	0.00	1.41	26.23	0.00	0.00
27	ER10a	ExonRegion	0	0.00	0.00	0.00	0.51	27.46	0.00	0.00
28	E10a_E11a	KnownJunction	0	0.00	0.00	0.00	0.00	23.56	0.00	0.00
29	ER11a	ExonRegion	0	0.00	0.00	0.89	0.84	33.63	1.65	0.00
30	E11a_E12a	KnownJunction	0	0.00	0.00	0.00	0.00	36.22	0.00	0.00
31	I11_AR1	ActiveIntronRegion	0	0.25	0.78	8.88	8.03	4.08	8.43	0.43
32	ER12a	ExonRegion	0	0.00	0.00	1.08	0.00	53.72	1.65	0.00
33	E12a_E13a	KnownJunction	0	0.00	0.00	0.00	0.00	56.78	2.79	0.00
34	I12	Intron	1	0.00	0.00	12.68	2.96	1.88	2.67	0.69
35	I12_SR1	SilentIntronRegion	1	0.00	0.00	12.70	2.96	1.88	2.67	0.69
36	ER13a	ExonRegion	0	0.00	0.00	2.02	0.01	49.48	3.76	0.00
37	E13a_E14a	KnownJunction	0	0.00	0.00	0.00	0.00	42.74	3.16	0.00
38	I13_AR1	ActiveIntronRegion	0	0.54	0.00	9.56	2.27	0.78	8.67	0.21
39	E14_Aa	NovelBoundary	1	0.00	0.00	14.46	1.35	2.17	4.85	2.34
40	ER14a	ExonRegion	0	0.54	0.31	51.87	34.00	71.22	44.56	27.91
41	IG32_SR1	SilentIntergenicRegion	0	0.13	0.00	16.48	1.22	1.97	2.04	1.14
42	IG32_AR1	ActiveIntergenicRegion	0	0.00	1.62	119.55	118.50	90.31	154.28	84.48
43	IG32_AR2	ActiveIntergenicRegion	0	0.52	0.00	23.04	17.97	51.57	19.89	14.55
44	IG32_AR4	ActiveIntergenicRegion	0	0.53	0.00	35.42	22.78	82.80	22.80	9.28
45	IG32_AR5	ActiveIntergenicRegion	0	0.00	1.85	22.62	67.66	16.75	67.26	32.95
46	IG32_AR6	ActiveIntergenicRegion	0	0.45	2.23	32.71	85.77	34.93	64.92	32.27
47	IG32_AR12	ActiveIntergenicRegion	0	0.53	0.00	1.12	0.00	11.55	0.00	0.00