Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	ASPH	Gene	0	118.10	65.39	80.72	85.72	118.13	36.03	171.95
2	379449	Transcript	0	1.43	6.51	2.91	12.37	1.05	3.81	2.52
3	379451	Transcript	1	31.09	42.48	36.96	76.29	7.92	27.93	18.93
4	389213	Transcript	1	55.99	15.68	39.69	49.23	8.49	5.57	2.06
5	379454	Transcript	1	121.08	26.51	85.47	76.52	127.42	30.73	103.76
6	356457	Transcript	0	239.31	100.57	141.80	128.02	237.34	44.66	330.78
7	389214	Transcript	0	1.49	0.73	0.27	0.91	6.05	0.08	1.53
8	389204	Transcript	0	0	0	0	0	0	0	0
9	356085	Transcript	0	0	0	0	0	0	0	0
10	ER1a	ExonRegion	0	4.67	33.50	3.92	38.00	9.25	15.12	21.67
11	E1_Ab	KnownBoundary	0	2.42	51.41	1.28	31.62	1.18	14.82	7.45
12	ER1b	ExonRegion	0	11.43	64.93	9.59	64.69	12.73	24.18	23.66
13	E1_Ac	KnownBoundary	0	25.29	96.23	26.74	112.64	13.28	40.63	52.68
14	ER1c	ExonRegion	1	32.87	117.83	35.52	120.48	48.30	43.35	116.14
15	E1a_E3a	KnownJunction	1	50.82	144.68	78.19	141.31	94.36	38.32	189.03
16	ER2a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
17	ER2b	ExonRegion	0	0.00	2.94	0.00	0.70	0.70	0.00	0.57
18	E2_Ac	KnownBoundary	0	0.00	4.36	0.00	1.68	0.00	0.00	2.21
19	ER2c	ExonRegion	0	0.14	2.02	0.21	1.15	0.10	0.14	1.47
20	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
21	ER3a	ExonRegion	0	125.28	250.70	130.27	240.71	152.32	91.56	320.65
22	E3a_E4a	KnownJunction	0	1.84	5.23	4.71	4.47	6.41	3.32	10.98
23	E3a_E5a	KnownJunction	0	172.99	289.75	174.96	277.90	146.85	109.99	405.26
24	ER4a	ExonRegion	0	5.33	8.37	7.42	8.17	6.48	3.81	17.58
25	E4a_E5a	KnownJunction	0	6.94	8.77	7.29	9.64	7.52	1.66	18.65
26	ER5a	ExonRegion	0	189.90	275.02	191.80	284.99	214.18	128.09	495.94
27	E5_Da	NovelBoundary	0	13.67	22.59	15.15	20.43	2.14	7.29	3.98
28	E5a_E6a	KnownJunction	0	0.00	2.21	2.79	10.94	1.04	2.57	1.20
29	E5a_E7a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.89
30	E5a_E9a	KnownJunction	0	185.73	241.93	169.02	276.11	256.09	115.05	467.29
31	I5_AR1	ActiveIntronRegion	1	8.92	14.01	10.17	8.33	1.64	1.29	3.58
32	I5_AR2	ActiveIntronRegion	1	13.61	26.36	9.16	9.05	2.77	0.74	3.13
33	ER6a	ExonRegion	0	2.86	10.81	3.03	13.79	1.06	5.05	3.84
34	ER7a	ExonRegion	0	0.22	0.00	0.00	0.03	0.04	0.03	0.67
35	E7a_E8a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
36	ER8a	ExonRegion	0	16.27	10.98	9.61	4.50	5.08	3.90	12.76
37	I8_AR9	ActiveIntronRegion	0	8.10	14.43	4.86	13.35	7.95	4.58	10.83
38	I8_AR13	ActiveIntronRegion	0	11.50	13.46	6.17	17.27	13.09	4.09	13.19
39	I8_AR14	ActiveIntronRegion	0	11.73	15.34	7.16	14.83	18.80	6.28	13.08
40	ER9a	ExonRegion	0	196.09	216.66	185.09	252.54	287.76	112.55	500.68
41	E9a_E10a	KnownJunction	0	234.43	195.83	193.45	232.93	269.28	100.85	508.28
42	ER10a	ExonRegion	0	287.81	229.43	223.23	297.14	344.59	120.43	552.79
43	E10a_E11a	KnownJunction	0	222.66	159.60	134.09	124.19	279.29	61.88	505.51
44	E10a_E12a	KnownJunction	1	60.95	84.96	73.12	152.58	14.22	55.85	37.45
45	ER11a	ExonRegion	0	200.95	169.23	144.36	126.71	314.56	58.08	517.94
46	E11a_E12a	KnownJunction	0	201.90	133.85	122.82	100.67	302.20	42.05	416.99
47	ER12a	ExonRegion	0	323.23	240.76	244.82	282.34	345.98	133.15	590.47
48	E12a_E13a	KnownJunction	1	123.52	156.05	105.33	145.34	325.32	112.37	417.52
49	E12a_E14a	KnownJunction	1	111.99	31.37	79.38	97.66	16.99	11.15	4.11
50	ER13a	ExonRegion	1	171.81	189.99	130.66	171.75	442.48	106.55	563.94
51	E13a_E14a	KnownJunction	1	154.47	149.96	97.30	142.34	490.86	67.21	458.53
52	ER14a	ExonRegion	0	444.70	194.58	289.23	265.32	464.40	89.65	588.68
53	E14a_E15a	KnownJunction	0	355.91	151.59	243.89	214.26	401.81	89.46	440.30
54	ER15a	ExonRegion	0	477.92	200.49	323.95	272.40	359.87	101.68	628.86
55	E15a_E16a	KnownJunction	0	288.94	128.97	189.30	184.92	288.58	74.77	398.14
56	E15a_E17a	NovelJunction	1	8.19	13.03	14.51	50.15	7.35	5.65	3.32
57	ER16a	ExonRegion	0	371.81	200.19	275.23	252.12	316.27	111.22	557.82
58	E16a_E17a	KnownJunction	0	218.27	152.32	166.72	180.21	318.89	84.04	360.42
59	ER17a	ExonRegion	0	383.13	202.88	257.83	246.57	325.09	95.89	473.43
60	E17a_E18a	KnownJunction	0	453.95	204.34	275.36	249.56	400.59	73.03	434.66
61	E17a_E21a	NovelJunction	0	4.57	4.60	10.91	13.30	9.66	1.55	9.60
62	E17a_E22a	NovelJunction	1	16.49	1.37	16.34	16.61	10.12	4.50	4.34
63	ER18a	ExonRegion	0	590.26	214.30	363.72	288.99	470.47	96.12	619.59
64	E18a_E19a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
65	E18a_E21a	KnownJunction	0	330.03	133.98	195.19	172.14	352.57	53.52	449.19
66	E18a_E22a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
67	ER18b	ExonRegion	0	1.23	0.00	0.81	0.00	1.62	0.00	0.40
68	ER19a	ExonRegion	0	4.46	2.19	0.81	2.74	18.14	0.25	4.59
69	ER20a	ExonRegion	0	0.00	0.00	0.00	0.80	0.00	0.00	0.00
70	ER21a	ExonRegion	0	148.59	67.15	88.41	83.91	122.11	35.80	212.37
71	ER22a	ExonRegion	1	165.54	31.15	120.19	73.96	98.20	35.73	99.63
72	E22a_E23a	KnownJunction	1	156.84	23.09	105.77	60.30	109.20	25.59	85.72
73	ER23a	ExonRegion	1	210.42	25.40	120.00	87.61	161.44	31.80	99.12
74	E23a_E24a	KnownJunction	1	232.77	29.48	114.32	96.90	168.61	23.88	115.55
75	ER24a	ExonRegion	1	174.66	30.09	112.05	81.14	146.36	32.68	120.47
76	E24a_E25a	KnownJunction	0	148.09	26.74	96.76	69.24	138.16	25.51	122.89
77	ER25a	ExonRegion	1	123.22	24.87	77.18	78.05	140.52	18.85	123.56
78	E25a_E26a	KnownJunction	1	82.10	26.17	77.53	83.96	135.97	22.94	121.04
79	ER26a	ExonRegion	1	83.39	27.92	79.14	95.70	122.16	32.82	124.90
80	E26a_E27a	KnownJunction	1	67.88	28.53	61.02	74.85	110.54	34.38	111.08
81	ER27a	ExonRegion	1	76.50	31.57	68.38	82.09	105.47	39.62	114.81
82	E27a_E28a	KnownJunction	0	85.39	35.34	77.77	80.00	134.01	40.44	107.89
83	ER28a	ExonRegion	0	71.65	34.68	71.64	72.52	100.04	24.93	102.18
84	E28a_E29a	KnownJunction	0	50.07	34.55	64.61	83.09	85.96	18.89	88.78
85	ER29a	ExonRegion	0	82.39	30.57	69.90	73.89	100.73	26.54	96.81
86	E29a_E30a	KnownJunction	1	90.59	16.26	88.48	56.89	110.54	24.33	83.17
87	ER30a	ExonRegion	1	145.58	24.73	104.71	92.07	132.07	37.54	103.93
88	E30a_E31a	KnownJunction	1	163.69	24.54	104.89	101.37	102.63	39.82	100.15
89	ER31a	ExonRegion	1	202.98	32.71	136.06	94.27	177.30	50.56	126.24
90	E31a_E32a	KnownJunction	1	173.63	29.58	103.50	88.32	242.42	44.22	122.25
91	ER32a	ExonRegion	1	141.40	21.24	77.33	71.52	145.04	41.59	114.68
92	E32a_E33a	KnownJunction	1	100.14	21.25	64.19	74.88	149.73	35.19	100.52
93	ER33a	ExonRegion	0	76.95	25.83	55.99	63.85	140.92	29.69	104.87
94	IG21	Intergenic	0	129.42	22.72	97.78	56.13	132.59	37.83	101.78
95	IG21_AR1	ActiveIntergenicRegion	0	129.57	22.74	97.89	56.19	132.73	37.87	101.90