Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	ADAM9	Gene	0	860.07	936.77	314.95	302.73	80.21	227.47	747.87
2	302458	Transcript	0	936.77	1162.85	363.95	389.60	110.32	245.21	1129.76
3	379917	Transcript	0	31.74	201.08	21.45	85.91	0.00	46.95	9.10
4	IG50_SR1	SilentIntergenicRegion	0	36.69	45.56	10.85	12.04	1.56	4.76	6.25
5	ER1a	ExonRegion	0	186.64	302.06	71.43	91.31	9.96	70.92	187.59
6	E1a_E2a	KnownJunction	0	253.80	426.02	116.76	136.11	17.50	111.17	260.32
7	ER2a	ExonRegion	0	664.36	717.89	253.56	208.97	38.49	192.28	484.23
8	E2a_E3a	KnownJunction	0	802.45	951.42	276.10	284.40	79.88	258.70	464.05
9	ER3a	ExonRegion	0	959.19	1111.39	357.83	368.72	66.46	283.06	589.57
10	E3a_E4a	KnownJunction	0	984.99	1201.16	379.94	413.22	61.87	299.00	654.27
11	ER4a	ExonRegion	0	1035.30	1385.89	408.49	446.22	49.98	335.27	709.24
12	E4a_E5a	KnownJunction	0	1001.91	1300.28	393.33	448.11	32.85	289.63	690.36
13	ER5a	ExonRegion	0	1008.35	1201.30	399.03	390.67	64.69	235.74	756.18
14	E5a_E6a	KnownJunction	0	928.04	1076.13	362.35	302.04	78.29	177.55	733.07
15	E6_Aa	NovelBoundary	1	400.21	44.40	139.72	2.79	7.26	4.23	7.21
16	ER6a	ExonRegion	0	819.04	1219.81	344.03	346.94	75.10	203.14	791.69
17	E6a_E7a	KnownJunction	0	696.54	1200.74	300.89	350.04	95.00	213.38	806.14
18	ER7a	ExonRegion	0	704.47	1132.34	305.98	338.44	76.46	217.11	785.83
19	E7a_E8a	KnownJunction	0	808.16	1075.87	316.49	331.57	88.68	203.52	812.94
20	ER8a	ExonRegion	0	1078.92	1218.01	398.06	372.08	92.56	249.81	912.34
21	E8a_E9a	KnownJunction	0	1112.63	1242.38	420.45	413.60	87.95	259.29	854.35
22	ER9a	ExonRegion	0	796.35	1174.68	307.28	369.69	85.45	241.31	790.37
23	E9a_E10a	KnownJunction	0	781.16	980.08	297.67	342.35	89.56	194.86	717.57
24	E9a_E11a	NovelJunction	0	11.57	41.01	2.49	13.68	0.00	4.48	1.48
25	ER10a	ExonRegion	0	754.65	1166.80	308.61	390.27	72.39	233.25	887.99
26	E10a_E11a	KnownJunction	0	628.48	1187.84	284.85	395.99	68.51	206.71	836.85
27	ER11a	ExonRegion	0	657.68	1219.69	311.17	399.22	76.63	230.26	851.52
28	E11a_E12a	KnownJunction	0	693.00	1161.46	323.39	340.48	86.86	226.78	788.99
29	E11a_E13a	NovelJunction	0	27.49	44.16	21.91	29.01	1.18	17.26	3.00
30	ER12a	ExonRegion	0	709.19	1107.42	322.84	330.40	78.87	226.93	837.90
31	E12a_E13a	KnownJunction	0	843.14	1155.68	332.53	358.63	104.34	215.04	901.90
32	ER13a	ExonRegion	0	815.79	1332.20	341.12	451.48	98.78	259.33	968.69
33	E13a_E14a	KnownJunction	0	877.86	1318.04	345.71	484.52	54.59	313.69	1017.47
34	ER14a	ExonRegion	0	925.04	1329.69	381.78	467.44	103.07	256.23	1041.09
35	E14a_E15a	KnownJunction	0	902.41	1178.38	393.06	451.88	113.97	223.00	922.61
36	E14a_E16a	NovelJunction	1	30.89	145.39	17.83	42.34	2.21	12.14	8.80
37	ER15a	ExonRegion	0	688.60	1056.15	317.10	329.47	83.14	188.60	792.44
38	E15a_E16a	KnownJunction	0	766.59	1016.42	332.79	292.75	91.38	170.02	828.38
39	ER16a	ExonRegion	0	853.46	1226.46	377.18	366.40	104.49	239.83	943.89
40	E16a_E17a	KnownJunction	0	872.67	1335.46	375.32	418.23	129.40	257.63	893.89
41	E16a_E19a	NovelJunction	0	6.39	39.49	4.11	11.57	0.00	10.75	1.59
42	ER17a	ExonRegion	0	956.25	1435.33	402.15	499.37	117.01	299.02	1111.70
43	E17_Da	NovelBoundary	1	370.60	3.63	140.93	1.03	34.37	3.75	2.06
44	E17a_E18a	KnownJunction	0	940.49	1313.73	373.50	424.95	108.49	264.08	1227.97
45	E17a_E19a	KnownJunction	0	31.74	201.08	21.45	85.91	0.00	46.95	9.10
46	ER18a	ExonRegion	0	950.48	1157.42	375.08	386.37	110.93	244.32	1108.63
47	E18a_E19a	KnownJunction	0	919.35	1017.41	343.28	357.47	111.55	227.24	1052.67
48	ER19a	ExonRegion	0	914.13	1269.47	371.37	439.64	115.07	311.96	1177.00
49	E19a_E20a	KnownJunction	0	1101.57	1331.02	416.11	505.30	113.77	422.23	1258.06
50	ER20a	ExonRegion	0	862.05	1226.27	314.98	429.49	96.06	343.21	1020.78
51	E20a_E21a	KnownJunction	0	775.97	1083.99	276.79	405.17	95.44	263.71	836.18
52	ER21a	ExonRegion	0	941.14	1223.65	352.46	438.38	114.34	364.39	1153.53
53	E21a_E22a	KnownJunction	0	1151.44	1266.81	421.31	410.02	86.61	401.76	1104.45
54	ER22a	ExonRegion	0	957.57	643.45	297.33	209.90	77.60	211.32	605.97