Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	PPAPDC1B	Gene	0	65.28	228.90	88.50	336.56	104.35	330.97	75.70
2	317577	Transcript	0	63.33	235.33	87.09	336.54	92.04	300.25	65.92
3	399872	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
4	IG40	Intergenic	0	39.21	18.32	41.16	22.10	58.97	36.71	37.02
5	IG40_AR2	ActiveIntergenicRegion	0	42.80	19.64	44.33	23.00	64.53	39.73	40.14
6	IG40_SR2	SilentIntergenicRegion	0	3.71	3.70	20.10	10.50	2.94	2.76	5.54
7	IG40_AR1	ActiveIntergenicRegion	0	1.54	3.64	11.63	7.48	0.81	1.84	3.37
8	IG40_SR1	SilentIntergenicRegion	0	1.37	4.57	7.23	13.05	0.44	5.18	4.19
9	ER1a	ExonRegion	0	4.70	53.86	3.64	91.62	8.92	60.33	5.89
10	E1a_E2a	KnownJunction	0	20.71	99.31	11.27	125.27	10.65	118.45	19.62
11	ER2a	ExonRegion	0	15.90	119.87	24.11	167.40	14.33	160.97	24.79
12	E2_Da	NovelBoundary	0	36.60	143.68	47.87	181.19	11.18	134.35	20.91
13	E2a_E3a	KnownJunction	0	34.16	118.98	27.76	176.07	35.11	205.98	49.87
14	E2a_E4a	NovelJunction	1	0.83	29.63	1.55	6.39	2.24	25.27	0.89
15	I2	Intron	0	19.90	83.50	34.36	104.56	15.64	81.08	11.52
16	I2_AR1	ActiveIntronRegion	0	19.98	83.88	34.51	105.03	15.72	81.45	11.57
17	E3_Aa	NovelBoundary	1	32.24	129.05	82.34	159.27	27.23	93.24	30.91
18	ER3a	ExonRegion	0	52.98	192.23	78.03	287.94	95.77	313.03	80.34
19	E3_Da	NovelBoundary	1	46.98	117.35	68.58	130.12	27.16	122.05	13.80
20	E3a_E4a	KnownJunction	0	51.56	179.49	64.59	307.48	198.53	322.05	82.08
21	I3	Intron	0	42.72	123.91	80.60	134.36	26.98	103.53	18.97
22	I3_AR1	ActiveIntronRegion	0	42.91	124.47	80.96	134.98	27.10	104.01	19.06
23	E4_Aa	NovelBoundary	1	81.50	173.39	108.15	195.73	41.93	134.08	29.47
24	ER4a	ExonRegion	0	74.53	234.49	96.38	361.97	214.40	410.23	84.05
25	E4_Da	NovelBoundary	1	32.68	127.63	109.04	111.51	31.97	79.81	16.98
26	E4a_E5a	KnownJunction	0	110.84	272.54	118.99	414.82	219.42	497.11	99.36
27	I4	Intron	0	29.47	57.74	55.56	52.59	23.13	29.64	13.54
28	I4_SR1	SilentIntronRegion	1	35.20	76.70	58.44	64.54	19.98	35.33	15.72
29	I4_AR1	ActiveIntronRegion	1	27.06	61.59	63.66	61.91	30.81	34.04	15.94
30	I4_SR2	SilentIntronRegion	1	31.18	39.29	54.43	35.08	24.90	23.67	8.93
31	I4_AR2	ActiveIntronRegion	0	25.29	42.61	46.74	39.67	19.42	22.63	11.15
32	E5_Aa	NovelBoundary	1	58.28	69.75	83.33	73.04	42.21	29.35	14.73
33	ER5a	ExonRegion	0	135.40	380.17	174.89	535.59	185.03	556.90	143.12
34	E5_Da	NovelBoundary	0	97.27	117.88	96.93	196.74	87.49	172.19	64.03
35	E5a_E6a	KnownJunction	0	91.38	318.41	130.43	448.60	146.64	443.16	112.37
36	I5	Intron	0	36.12	43.66	45.74	58.90	40.67	49.31	25.67
37	I5_AR1	ActiveIntronRegion	0	53.97	67.57	64.74	89.17	60.99	76.82	38.43
38	I5_SR1	SilentIntronRegion	1	10.00	6.26	24.01	11.42	7.85	7.55	8.44
39	ER6a	ExonRegion	0	98.24	331.97	130.17	510.18	143.59	477.94	109.18
40	E6a_E7a	KnownJunction	0	72.68	253.15	92.85	369.74	96.59	318.81	67.74
41	I6	Intron	0	15.10	14.98	23.75	16.84	17.78	18.24	9.16
42	I6_AR1	ActiveIntronRegion	0	16.86	9.40	30.32	13.40	15.75	16.58	9.41
43	I6_AR2	ActiveIntronRegion	0	20.78	27.68	26.29	26.71	28.67	27.48	11.40
44	I6_SR2	SilentIntronRegion	0	13.88	21.38	22.82	22.94	22.14	18.21	14.03
45	ER7a	ExonRegion	0	53.98	217.50	81.34	303.34	87.48	281.68	64.09
46	E7_Da	NovelBoundary	0	78.29	189.94	96.81	231.52	72.57	294.64	49.96
47	I7	Intron	0	115.90	181.37	131.40	302.05	106.33	322.55	62.32
48	I7_AR1	ActiveIntronRegion	0	116.07	181.63	131.59	302.48	106.48	323.01	62.41
49	ER8a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00