Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	PRKDC	Gene	0	168.49	49.61	480.81	132.02	750.50	29.56	221.29
2	338368	Transcript	1	34.15	10.80	18.49	48.38	119.55	8.25	51.01
3	314191	Transcript	0	226.44	46.61	511.71	143.86	1682.38	45.58	264.78
4	ER1a	ExonRegion	0	11.06	5.27	21.55	14.15	27.96	2.36	13.50
5	E1a_E2a	KnownJunction	1	29.52	12.85	55.67	43.89	55.40	8.84	18.34
6	ER2a	ExonRegion	0	96.53	18.33	245.96	68.96	161.72	14.63	71.13
7	E2a_E3a	KnownJunction	1	132.74	31.58	366.60	105.71	275.94	21.36	88.07
8	ER3a	ExonRegion	1	157.74	35.47	407.53	104.33	208.92	28.86	87.53
9	E3a_E4a	KnownJunction	1	169.00	41.48	437.84	80.00	197.56	24.23	84.90
10	ER4a	ExonRegion	1	133.64	38.13	373.05	72.31	159.49	12.26	70.54
11	E4a_E5a	KnownJunction	1	139.83	29.11	335.49	52.20	130.66	8.15	71.27
12	ER5a	ExonRegion	1	151.37	29.46	400.01	69.94	146.72	10.79	92.03
13	E5a_E6a	KnownJunction	1	101.64	24.96	365.93	70.25	177.67	11.39	80.64
14	ER6a	ExonRegion	0	153.33	36.24	403.85	86.12	215.85	16.70	114.96
15	E6a_E7a	KnownJunction	0	137.19	41.88	378.41	100.54	243.00	11.36	118.58
16	ER7a	ExonRegion	0	130.23	44.17	368.77	97.81	225.52	20.51	128.19
17	E7a_E8a	KnownJunction	0	112.51	36.91	292.78	97.80	219.65	13.21	111.76
18	ER8a	ExonRegion	0	128.63	39.57	320.05	85.19	254.96	16.49	120.19
19	E8a_E9a	KnownJunction	0	112.19	31.11	260.43	59.84	228.62	13.11	78.69
20	E9a_E10a	KnownJunction	0	85.25	29.40	257.50	63.50	238.57	15.52	96.55
21	ER9a	ExonRegion	0	140.55	38.29	368.28	84.67	268.22	19.73	122.30
22	ER10a	ExonRegion	0	110.91	42.85	337.39	101.15	271.52	15.60	140.84
23	E10a_E11a	KnownJunction	0	156.38	49.71	454.39	111.94	402.69	21.09	162.56
24	ER11a	ExonRegion	0	162.41	52.44	452.59	128.36	425.27	19.08	193.43
25	E11a_E12a	KnownJunction	0	158.74	43.01	414.38	120.77	351.33	18.65	182.15
26	ER12a	ExonRegion	0	188.00	53.70	456.45	147.20	488.36	16.06	229.57
27	E12a_E13a	KnownJunction	1	138.91	66.73	341.77	98.50	374.82	6.08	180.73
28	ER13a	ExonRegion	1	119.86	50.45	318.07	105.36	383.31	10.08	181.29
29	E13a_E14a	KnownJunction	1	85.29	44.14	268.78	97.88	364.26	9.19	119.50
30	ER14a	ExonRegion	1	90.31	55.42	303.12	104.50	300.05	11.35	136.13
31	E14a_E15a	KnownJunction	1	90.14	55.83	300.08	93.14	253.42	12.01	131.49
32	ER15a	ExonRegion	0	102.39	47.88	336.85	88.38	257.08	17.79	131.95
33	E15a_E16a	KnownJunction	0	104.38	47.97	395.86	95.93	264.55	22.54	137.38
34	ER16a	ExonRegion	0	123.82	41.62	437.18	95.52	242.55	21.26	142.73
35	E16a_E17a	KnownJunction	0	100.19	30.42	421.40	74.83	176.79	31.60	146.12
36	ER17a	ExonRegion	0	106.01	26.64	381.93	60.39	210.14	15.23	128.04
37	E17a_E18a	KnownJunction	0	123.12	24.67	400.16	56.30	184.40	13.45	119.87
38	E18_Aa	NovelBoundary	1	52.07	0.00	157.05	1.68	55.83	0.00	0.00
39	ER18a	ExonRegion	0	142.15	35.98	451.62	74.08	260.29	12.43	132.47
40	E18a_E19a	KnownJunction	0	198.63	40.04	585.49	121.02	594.21	14.87	174.13
41	ER19a	ExonRegion	0	283.49	45.12	732.97	142.41	502.55	20.81	218.50
42	E19a_E20a	KnownJunction	0	209.36	42.30	585.84	154.55	411.42	31.65	183.13
43	ER20a	ExonRegion	0	247.27	56.14	597.20	165.70	472.73	28.55	214.12
44	E20a_E21a	KnownJunction	0	278.34	63.79	712.68	233.63	793.80	37.41	281.80
45	ER21a	ExonRegion	0	183.59	52.44	482.14	154.98	474.52	22.04	198.88
46	E21a_E22a	KnownJunction	1	75.69	44.82	312.63	122.37	274.63	11.26	117.40
47	ER22a	ExonRegion	0	88.33	37.76	301.58	94.20	293.05	12.19	126.78
48	E22a_E23a	KnownJunction	0	115.36	35.83	351.54	98.99	307.71	17.26	137.44
49	ER23a	ExonRegion	0	107.27	35.52	344.93	99.02	364.90	25.38	140.65
50	E23a_E24a	KnownJunction	0	100.34	33.18	287.59	94.25	363.61	26.29	131.19
51	ER24a	ExonRegion	0	120.68	42.28	340.82	118.61	369.33	25.69	157.49
52	E24a_E25a	KnownJunction	0	107.87	48.31	316.51	128.52	385.79	29.32	177.84
53	ER25a	ExonRegion	0	108.60	45.01	289.89	112.39	412.22	14.08	149.29
54	E25a_E26a	KnownJunction	0	137.91	43.51	324.53	102.32	448.91	12.84	146.67
55	ER26a	ExonRegion	0	141.98	45.15	394.64	108.66	410.53	23.56	162.61
56	E26a_E27a	KnownJunction	0	174.79	45.27	467.34	101.32	367.25	27.04	173.20
57	ER27a	ExonRegion	0	155.09	35.12	403.79	88.43	408.68	27.39	158.91
58	E27a_E28a	KnownJunction	0	119.15	33.55	245.96	70.65	343.88	12.46	133.64
59	ER28a	ExonRegion	0	132.92	36.19	322.83	86.32	429.76	10.47	158.68
60	E28_Da	NovelBoundary	1	51.17	2.15	135.04	4.42	3.34	1.66	7.19
61	E28a_E29a	KnownJunction	0	109.47	33.23	318.45	62.58	551.49	12.14	180.99
62	E28a_E31a	NovelJunction	0	0.68	7.43	10.33	18.10	1.11	3.19	3.58
63	ER29a	ExonRegion	0	183.05	43.19	445.40	117.03	473.05	17.73	197.89
64	E29a_E30a	KnownJunction	0	209.36	27.66	475.39	136.35	410.36	17.58	193.89
65	ER30a	ExonRegion	0	145.62	26.96	390.24	96.31	452.39	14.50	159.35
66	E30a_E31a	KnownJunction	0	122.19	25.72	322.02	70.95	337.68	10.02	111.40
67	ER31a	ExonRegion	0	60.15	28.48	201.34	64.02	196.29	8.85	91.10
68	E31a_E32a	KnownJunction	0	35.08	15.32	90.29	51.36	52.01	4.88	50.82
69	ER32a	ExonRegion	0	62.06	24.87	172.87	67.24	216.35	8.44	96.15
70	E32a_E33a	KnownJunction	0	94.62	26.59	262.14	103.60	267.83	17.66	127.68
71	ER33a	ExonRegion	0	127.03	56.09	360.52	131.64	381.40	23.52	182.69
72	E33a_E34a	KnownJunction	0	123.71	47.29	361.54	100.29	383.74	25.97	184.39
73	ER34a	ExonRegion	0	128.08	58.98	397.04	111.23	449.52	21.46	192.19
74	E34a_E35a	KnownJunction	0	144.74	66.78	409.89	142.63	531.58	18.97	190.51
75	ER35a	ExonRegion	0	118.82	58.80	337.82	125.93	417.52	17.97	189.51
76	E35a_E36a	KnownJunction	0	102.86	72.90	335.10	140.77	381.76	29.32	182.25
77	ER36a	ExonRegion	0	101.95	56.41	303.81	115.94	388.19	28.78	173.10
78	E36a_E37a	KnownJunction	0	68.16	40.67	220.31	87.15	307.13	30.74	112.17
79	ER37a	ExonRegion	0	76.75	33.50	284.49	84.98	344.11	22.27	153.88
80	E37a_E38a	KnownJunction	0	59.22	35.68	280.38	65.86	289.45	25.78	149.56
81	ER38a	ExonRegion	0	79.28	34.23	333.27	85.09	383.27	17.66	167.49
82	E38a_E39a	KnownJunction	0	73.94	22.96	351.28	89.54	422.54	19.67	189.83
83	ER39a	ExonRegion	0	94.83	38.15	381.05	109.40	421.39	18.23	207.41
84	E39a_E40a	KnownJunction	0	77.02	38.57	343.36	102.92	474.45	12.81	191.98
85	ER40a	ExonRegion	0	96.39	43.36	380.63	104.49	411.75	17.28	201.45
86	E40a_E41a	KnownJunction	0	120.42	39.88	490.68	100.10	487.94	11.66	225.50
87	ER41a	ExonRegion	1	95.86	29.58	366.62	109.63	457.29	10.56	209.30
88	E41a_E42a	KnownJunction	1	90.66	25.04	347.06	101.59	445.01	7.58	187.99
89	ER42a	ExonRegion	0	124.03	38.96	390.08	128.09	497.25	14.61	216.28
90	E42a_E43a	KnownJunction	1	154.40	67.68	421.48	115.73	620.03	15.20	205.56
91	ER43a	ExonRegion	0	183.06	55.93	511.49	141.02	679.42	20.13	228.59
92	E43a_E44a	KnownJunction	1	207.41	56.38	547.35	119.39	578.33	14.07	222.29
93	ER44a	ExonRegion	0	149.88	40.08	459.82	92.99	477.02	18.93	172.88
94	E44a_E45a	KnownJunction	0	175.43	37.23	503.42	116.41	545.02	15.03	172.92
95	ER45a	ExonRegion	0	120.56	29.67	417.12	93.26	399.08	17.26	155.89
96	E45a_E46a	KnownJunction	0	80.46	25.90	327.63	85.74	308.68	14.85	124.08
97	ER46a	ExonRegion	0	93.48	27.41	342.46	104.80	373.19	16.81	150.82
98	E46a_E47a	KnownJunction	0	95.63	34.94	331.45	100.32	395.68	17.29	163.31
99	ER47a	ExonRegion	0	74.46	34.46	265.75	92.83	281.63	10.79	145.24
100	E47a_E48a	KnownJunction	1	73.10	40.85	229.52	79.65	329.10	8.68	142.45
101	ER48a	ExonRegion	0	69.50	32.87	227.49	85.16	401.74	10.63	143.62
102	E48a_E49a	KnownJunction	0	88.71	27.95	228.13	85.53	366.79	21.52	133.40
103	ER49a	ExonRegion	0	101.75	34.96	340.00	119.78	446.53	19.48	176.62
104	E49a_E50a	KnownJunction	0	101.19	40.83	355.25	102.13	487.78	17.39	179.87
105	ER50a	ExonRegion	0	128.50	46.96	392.43	114.97	522.61	21.72	167.63
106	E50a_E51a	KnownJunction	0	125.36	45.08	453.57	106.77	452.73	20.48	166.46
107	ER51a	ExonRegion	0	243.04	46.29	670.69	117.36	769.43	21.27	207.17
108	E51a_E52a	KnownJunction	0	216.65	36.39	582.52	84.09	647.25	15.03	161.13
109	ER52a	ExonRegion	0	198.20	43.66	573.88	114.58	652.86	14.74	187.43
110	E52a_E53a	KnownJunction	0	147.14	43.16	455.76	128.68	584.30	14.02	183.51
111	ER53a	ExonRegion	0	148.58	40.64	461.98	122.86	593.56	18.41	194.90
112	E53a_E54a	KnownJunction	0	149.43	36.70	448.15	133.88	603.94	22.16	206.46
113	ER54a	ExonRegion	0	153.77	49.30	474.20	123.22	787.31	23.83	250.52
114	E54a_E55a	KnownJunction	0	156.20	59.69	498.33	151.03	861.62	22.11	261.65
115	ER55a	ExonRegion	0	201.74	63.50	594.55	165.87	835.28	28.97	297.51
116	E55a_E56a	KnownJunction	0	204.03	50.07	608.33	167.40	852.75	23.91	281.73
117	E56_Aa	NovelBoundary	1	81.60	0.00	250.89	0.00	2.26	0.00	0.57
118	ER56a	ExonRegion	0	201.99	48.24	646.69	138.52	858.42	28.86	271.51
119	E56a_E57a	KnownJunction	0	166.15	52.10	565.21	119.88	797.47	16.72	231.21
120	ER57a	ExonRegion	0	279.59	49.33	772.16	113.45	1075.56	30.07	278.38
121	E57a_E58a	KnownJunction	1	432.65	47.05	925.15	118.06	1016.19	23.53	268.27
122	ER58a	ExonRegion	0	405.42	56.84	942.09	151.77	1262.51	37.82	299.93
123	E58a_E59a	KnownJunction	0	239.18	44.71	606.16	115.92	1198.17	15.76	212.43
124	ER59a	ExonRegion	0	128.09	41.92	367.65	99.76	642.80	21.84	178.32
125	E59a_E60a	KnownJunction	0	76.39	34.73	294.98	95.36	486.69	26.02	150.75
126	ER60a	ExonRegion	0	89.19	39.67	293.99	118.16	517.75	35.71	180.18
127	E60a_E61a	KnownJunction	0	123.56	37.25	367.62	122.94	697.58	42.21	221.09
128	ER61a	ExonRegion	0	136.80	58.36	366.74	136.49	640.41	33.39	224.22
129	E61a_E62a	KnownJunction	0	188.01	71.25	408.63	153.50	657.86	37.36	172.99
130	ER62a	ExonRegion	0	192.39	72.93	506.78	160.66	860.98	29.16	267.50
131	E62a_E63a	KnownJunction	0	163.01	56.77	443.38	137.81	761.87	24.44	211.19
132	ER63a	ExonRegion	0	170.59	45.40	505.61	134.03	815.59	32.27	226.75
133	E63a_E64a	KnownJunction	0	104.13	41.32	333.79	116.79	504.70	28.19	162.93
134	ER64a	ExonRegion	0	66.13	40.51	213.60	94.55	403.55	17.06	134.70
135	E64a_E65a	KnownJunction	0	82.30	44.95	320.92	103.60	586.37	22.70	187.24
136	ER65a	ExonRegion	0	118.15	56.07	406.62	137.27	668.54	28.01	248.31
137	E65a_E66a	KnownJunction	0	98.59	56.54	401.18	155.23	647.62	42.24	218.40
138	ER66a	ExonRegion	0	147.47	57.93	522.72	147.23	897.49	37.66	295.92
139	E66a_E67a	KnownJunction	0	177.48	59.14	569.44	137.38	999.57	24.31	256.45
140	ER67a	ExonRegion	0	213.00	54.97	641.17	152.43	1098.22	40.70	293.07
141	E67a_E68a	KnownJunction	0	307.40	52.62	847.66	149.06	1347.02	42.50	308.33
142	ER68a	ExonRegion	0	279.61	63.18	832.96	181.85	1325.05	51.35	362.25
143	E68a_E69a	KnownJunction	0	281.94	63.21	837.36	214.81	1441.98	47.49	348.81
144	ER69a	ExonRegion	0	298.57	74.12	890.17	193.27	1390.94	42.65	383.68
145	E69a_E70a	KnownJunction	0	207.67	59.66	696.17	167.40	1096.49	36.15	327.53
146	ER70a	ExonRegion	0	200.88	55.65	573.51	147.01	1063.68	22.91	278.65
147	E70a_E71a	KnownJunction	0	182.44	41.46	487.26	127.57	1012.46	14.63	228.36
148	ER71a	ExonRegion	0	164.45	44.76	433.79	126.39	875.34	24.53	217.32
149	E71a_E72a	KnownJunction	0	179.20	50.97	549.90	152.66	952.64	34.71	246.87
150	ER72a	ExonRegion	0	142.34	54.67	419.01	140.02	959.83	29.46	237.22
151	E72a_E73a	KnownJunction	0	112.21	41.56	363.41	133.40	896.76	24.87	215.19
152	ER73a	ExonRegion	0	104.81	47.27	330.02	116.02	738.81	23.40	210.67
153	E73a_E74a	KnownJunction	0	145.14	56.12	431.04	96.28	930.99	16.88	262.68
154	ER74a	ExonRegion	0	156.58	55.88	511.98	106.75	955.26	25.57	282.45
155	E74a_E75a	KnownJunction	0	116.26	49.08	432.30	83.33	956.79	35.99	244.59
156	ER75a	ExonRegion	0	166.95	67.45	596.60	149.96	973.34	47.43	318.74
157	E75a_E76a	KnownJunction	0	182.85	63.26	576.45	164.71	870.84	44.43	246.36
158	ER76a	ExonRegion	0	188.42	48.44	612.95	162.18	850.29	39.44	260.71
159	E76a_E77a	KnownJunction	0	226.62	52.39	768.05	163.74	1267.95	41.70	327.30
160	ER77a	ExonRegion	0	280.53	46.99	835.92	156.10	910.06	31.54	254.92
161	E77a_E78a	KnownJunction	0	161.16	32.92	510.82	139.38	595.73	24.28	176.05
162	E78_Aa	NovelBoundary	1	70.40	1.34	220.10	12.14	12.40	1.53	2.68
163	ER78a	ExonRegion	0	193.06	43.12	610.01	158.66	965.14	38.91	256.23
164	E78a_E79a	KnownJunction	0	126.73	54.22	397.11	162.47	941.06	46.95	237.84
165	E78a_E80a	NovelJunction	0	5.14	7.33	2.90	8.18	1.01	2.79	0.00
166	ER79a	ExonRegion	0	126.01	54.44	419.36	165.15	1045.66	37.99	266.90
167	E79a_E80a	KnownJunction	0	134.45	58.30	408.94	164.80	1182.24	39.77	306.94
168	ER80a	ExonRegion	0	149.34	63.80	352.31	166.27	1083.20	37.53	284.61
169	E80a_E81a	KnownJunction	0	181.20	34.42	468.30	136.84	1366.23	31.97	227.74
170	E80a_E82a	KnownJunction	1	34.15	10.80	18.49	48.38	119.55	8.25	51.01
171	ER81a	ExonRegion	0	230.44	49.69	522.39	136.58	1580.53	44.60	268.16
172	E81a_E82a	KnownJunction	0	267.69	55.72	544.45	158.16	2100.37	60.17	298.44
173	E82_Aa	NovelBoundary	0	21.06	2.78	26.60	4.36	22.94	10.05	13.82
174	ER82a	ExonRegion	0	488.26	87.82	968.52	287.49	2188.06	81.15	433.31
175	E82a_E83a	KnownJunction	0	449.79	105.24	1071.21	342.57	2080.15	123.01	485.68
176	ER83a	ExonRegion	0	396.56	90.51	892.53	302.01	1934.03	101.06	439.71
177	E83a_E84a	KnownJunction	0	394.67	71.06	832.03	239.40	2051.33	68.93	383.75
178	ER84a	ExonRegion	0	225.91	70.26	575.29	210.53	1790.34	57.76	354.11
179	E84a_E85a	KnownJunction	0	133.57	51.83	420.99	165.58	1334.99	30.85	298.60
180	ER85a	ExonRegion	0	183.19	61.31	489.43	164.82	1145.54	40.22	297.18
181	E85a_E86a	KnownJunction	0	211.28	63.13	563.66	156.86	1101.49	25.11	234.66
182	ER86a	ExonRegion	0	248.93	55.58	655.46	166.41	1298.16	45.31	269.78
183	E86a_E87a	KnownJunction	0	154.93	40.88	476.23	142.44	1266.78	43.36	243.68
184	ER87a	ExonRegion	0	295.97	75.36	794.59	221.61	1768.99	70.01	363.73
185	IG2_AR2	ActiveIntergenicRegion	0	4.81	10.21	6.80	7.81	0.18	6.43	0.91
186	IG2_SR1	SilentIntergenicRegion	0	7.51	22.88	11.02	23.75	0.00	15.06	1.64
187	IG2_AR1	ActiveIntergenicRegion	0	0.20	8.52	0.38	8.83	0.00	4.20	0.39