Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	ENTPD4	Gene	0	152.08	160.15	140.68	103.01	92.91	120.72	154.49
2	358689	Transcript	0	125.38	103.98	95.45	63.59	42.55	72.26	83.39
3	356206	Transcript	0	21.79	21.38	25.91	17.02	39.75	12.43	48.12
4	ER1a	ExonRegion	0	17.03	17.19	13.54	18.87	5.00	28.58	7.92
5	E1a_E2a	KnownJunction	0	27.91	34.89	22.58	29.56	11.60	39.66	25.25
6	ER2a	ExonRegion	0	88.17	105.37	69.23	60.36	36.11	73.58	76.23
7	E2a_E3a	KnownJunction	0	168.28	192.60	164.86	120.80	60.49	161.31	138.46
8	ER3a	ExonRegion	0	192.75	255.08	185.55	150.17	95.01	204.90	172.84
9	E3a_E4a	KnownJunction	0	205.94	181.35	195.87	150.06	125.61	151.98	165.38
10	ER4a	ExonRegion	0	199.54	204.84	203.09	142.80	110.58	160.03	207.39
11	E4a_E5a	KnownJunction	0	200.10	169.21	206.24	107.39	130.02	138.74	207.33
12	ER5a	ExonRegion	0	167.14	193.43	198.96	115.66	129.86	137.70	207.38
13	E5a_E6a	KnownJunction	0	198.29	195.33	212.26	142.01	134.44	183.93	184.24
14	ER6a	ExonRegion	0	207.56	215.20	218.78	135.63	134.90	166.17	214.81
15	E6a_E7a	KnownJunction	0	202.72	183.37	188.70	140.44	146.06	125.05	209.38
16	E6a_E8a	NovelJunction	0	6.03	19.39	3.58	12.57	2.14	30.47	3.90
17	ER7a	ExonRegion	0	205.66	187.15	188.15	152.75	134.75	133.63	215.69
18	E7a_E8a	KnownJunction	0	176.45	162.67	163.56	125.16	128.57	116.69	178.20
19	ER8a	ExonRegion	0	268.67	217.33	199.50	136.01	165.19	151.06	214.48
20	E8_Da	NovelBoundary	0	230.27	111.92	132.80	73.85	55.40	63.89	90.36
21	E8a_E9a	KnownJunction	0	63.20	63.34	76.39	45.78	117.82	34.14	138.69
22	E8_Db	NovelBoundary	0	29.12	38.07	24.11	16.85	5.49	35.88	3.73
23	E8b_E9a	KnownJunction	1	191.23	120.51	152.07	62.20	38.91	62.58	85.47
24	ER8b	ExonRegion	1	213.40	123.16	156.67	72.12	52.24	64.26	96.02
25	I8	Intron	1	33.12	17.47	22.36	9.44	4.28	11.38	3.40
26	I8_SR1	SilentIntronRegion	1	31.25	25.69	20.63	12.84	4.65	16.15	4.17
27	I8_AR1	ActiveIntronRegion	1	34.79	10.61	23.88	6.61	3.97	7.40	2.77
28	E9_Aa	NovelBoundary	1	72.40	29.19	72.40	20.02	9.82	22.48	3.25
29	ER9a	ExonRegion	0	273.89	242.32	238.75	154.07	159.49	173.50	262.80
30	E9a_E10a	KnownJunction	0	275.43	255.59	316.85	164.04	152.17	213.11	326.13
31	ER10a	ExonRegion	0	225.68	222.36	219.06	141.65	134.70	168.43	218.78
32	E10a_E11a	KnownJunction	0	256.87	202.68	214.41	126.00	193.00	166.61	213.90
33	I10	Intron	1	33.80	18.29	16.74	5.52	8.09	6.91	4.15
34	I10_SR1	SilentIntronRegion	1	70.72	29.49	32.56	10.09	13.05	12.38	8.58
35	ER11a	ExonRegion	0	199.51	150.16	156.06	111.75	128.34	111.88	208.93
36	E11a_E12a	KnownJunction	0	96.45	72.90	93.52	80.49	88.45	38.16	183.67
37	E12_Aa	NovelBoundary	1	43.26	101.75	49.51	40.15	27.73	80.94	19.75
38	ER12a	ExonRegion	0	127.44	168.00	121.00	109.57	107.82	121.12	192.51
39	E12a_E13a	KnownJunction	0	50.25	99.86	38.53	73.69	46.57	104.81	96.38
40	E12a_E14a	KnownJunction	0	0.00	0.00	0.00	1.52	0.00	0.00	0.00
41	I12	Intron	0	20.67	15.09	14.32	6.49	20.09	8.08	7.76
42	I12_AR1	ActiveIntronRegion	0	20.72	15.12	14.36	6.50	20.14	8.10	7.78
43	ER13a	ExonRegion	0	46.64	72.41	34.52	46.36	32.46	57.39	55.69
44	E13_Da	NovelBoundary	0	3598.07	2214.03	2495.90	2005.34	1189.13	1750.35	1732.24
45	I13_AR1	ActiveIntronRegion	1	94.86	81.63	87.25	63.39	75.48	90.19	92.69
46	ER14a	ExonRegion	0	2.18	0.81	1.33	3.75	1.43	3.15	5.67