Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	PCM1	Gene	0	154.94	65.34	222.21	131.40	230.49	131.31	113.48
2	325083	Transcript	0	0	0	0	0	0	0	0
3	325126	Transcript	0	37.97	21.51	54.38	29.33	58.25	21.92	23.95
4	327578	Transcript	0	125.62	29.61	149.63	94.81	82.16	80.83	33.53
5	400012	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
6	ER1a	ExonRegion	0	18.29	28.11	23.28	43.24	11.38	34.33	15.43
7	E1a_E2a	KnownJunction	0	60.13	57.98	89.79	115.03	14.80	76.54	64.00
8	E1a_E3a	NovelJunction	0	9.08	10.17	8.16	18.77	0.00	28.68	1.39
9	E1a_E4a	NovelJunction	0	0.83	4.26	0.89	1.06	0.00	10.08	0.00
10	ER2a	ExonRegion	0	94.59	61.44	170.43	108.30	78.04	87.91	77.45
11	E2a_E3a	KnownJunction	0	87.56	53.62	172.60	89.13	165.38	90.53	70.55
12	I2_AR3	ActiveIntronRegion	0	22.40	19.87	32.07	46.94	12.25	32.09	8.75
13	ER3a	ExonRegion	0	123.66	95.57	230.96	175.59	169.62	142.30	109.35
14	E3a_E4a	KnownJunction	0	123.36	101.72	229.54	194.57	89.10	171.87	121.67
15	ER4a	ExonRegion	0	147.37	109.72	288.24	209.39	166.05	172.27	138.88
16	E4a_E5a	KnownJunction	0	163.69	107.98	290.68	217.27	132.55	157.53	111.11
17	ER5a	ExonRegion	0	144.53	94.82	265.37	179.58	163.11	140.78	120.13
18	E5a_E6a	KnownJunction	0	104.86	67.75	209.68	153.04	130.36	112.29	94.14
19	ER6a	ExonRegion	0	133.44	76.17	261.98	168.33	148.09	112.31	95.71
20	E6a_E7a	KnownJunction	0	36.27	15.45	54.48	31.64	47.26	18.41	16.34
21	E6a_E8a	KnownJunction	0	83.97	34.60	160.52	91.43	96.66	110.01	77.15
22	ER7a	ExonRegion	0	39.87	21.69	59.85	28.17	70.46	26.77	27.76
23	E7a_E8a	KnownJunction	0	37.77	27.40	48.80	28.17	57.03	20.58	27.75
24	ER8a	ExonRegion	0	189.57	78.95	281.52	178.26	207.45	152.35	120.70
25	E8a_E9a	KnownJunction	0	174.34	74.24	257.67	193.27	207.04	146.54	114.75
26	ER9a	ExonRegion	0	225.42	92.65	319.68	194.37	242.18	155.78	140.00
27	E9a_E10a	KnownJunction	0	212.08	79.26	335.04	203.70	276.80	180.26	160.17
28	ER10a	ExonRegion	0	257.17	104.17	366.24	237.78	290.72	183.96	167.61
29	E10a_E11a	KnownJunction	0	219.37	94.08	301.68	199.23	263.03	173.72	142.38
30	ER11a	ExonRegion	0	168.00	90.78	261.05	178.71	235.04	125.98	130.21
31	E11a_E12a	KnownJunction	0	168.64	85.54	294.43	174.03	267.87	152.79	111.99
32	ER12a	ExonRegion	0	201.57	91.92	345.49	184.79	237.67	152.92	140.78
33	E12a_E13a	KnownJunction	0	183.41	74.35	321.25	165.63	222.28	120.12	131.98
34	ER13a	ExonRegion	0	200.76	97.87	297.44	193.08	274.39	147.17	143.47
35	E13a_E14a	KnownJunction	0	167.00	83.31	238.65	175.88	145.44	121.83	103.10
36	ER14a	ExonRegion	0	233.00	126.29	337.30	216.50	278.39	176.99	156.95
37	E14a_E15a	KnownJunction	0	337.47	121.01	457.85	229.08	418.55	189.23	191.47
38	ER15a	ExonRegion	0	347.11	109.87	496.65	258.73	389.54	233.00	200.81
39	E15a_E16a	KnownJunction	0	379.05	77.29	495.68	239.95	432.24	200.38	195.87
40	ER16a	ExonRegion	0	235.10	85.25	349.44	217.61	286.55	165.25	141.60
41	E16a_E17a	KnownJunction	0	180.82	70.04	291.53	190.04	223.70	152.95	119.62
42	ER17a	ExonRegion	0	138.92	77.68	284.05	183.95	242.32	158.32	143.21
43	E17a_E18a	KnownJunction	0	94.35	56.85	201.70	146.10	207.18	133.22	117.22
44	E17a_E19a	NovelJunction	0	5.21	4.83	3.94	6.64	0.00	13.48	0.00
45	ER18a	ExonRegion	0	85.71	81.80	201.70	174.66	213.57	143.85	139.68
46	E18a_E19a	KnownJunction	0	99.09	86.12	240.62	213.02	236.20	167.20	173.28
47	ER19a	ExonRegion	0	110.29	95.61	239.97	231.26	227.44	170.14	170.96
48	E19_Ab	KnownBoundary	0	116.95	102.80	237.90	220.68	209.71	163.69	155.14
49	ER19b	ExonRegion	0	121.08	103.31	275.25	230.27	291.30	202.91	184.92
50	E19a_E20a	KnownJunction	0	163.63	112.13	313.03	206.38	349.80	245.86	188.99
51	ER20a	ExonRegion	0	188.91	111.51	334.36	240.32	365.21	238.36	217.08
52	E20_Da	NovelBoundary	0	143.58	73.51	205.17	123.91	177.71	137.86	127.84
53	E20a_E35b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
54	E20b_E21a	KnownJunction	0	190.58	127.63	294.12	216.65	338.02	169.35	190.15
55	ER20b	ExonRegion	0	199.20	122.79	311.75	225.32	345.74	207.76	215.61
56	ER21a	ExonRegion	0	204.99	89.97	321.41	218.53	416.24	216.71	216.77
57	E21a_E22a	KnownJunction	0	301.37	64.52	363.18	209.58	492.69	215.60	184.69
58	ER22a	ExonRegion	0	363.59	96.69	452.35	249.75	430.01	285.74	219.10
59	E22a_E23a	KnownJunction	0	450.03	94.81	507.24	230.25	509.03	259.98	189.19
60	ER23a	ExonRegion	0	382.31	98.53	467.60	205.14	440.63	246.43	165.94
61	E23a_E24a	KnownJunction	0	222.76	88.59	303.03	154.26	269.37	182.18	105.05
62	ER24a	ExonRegion	0	267.00	86.09	366.98	179.68	277.43	207.02	152.55
63	E24a_E25a	KnownJunction	0	78.49	34.26	106.46	30.07	139.05	38.43	53.36
64	E24a_E26a	KnownJunction	1	251.23	59.22	299.23	189.61	164.32	161.66	67.06
65	ER25a	ExonRegion	0	115.49	29.53	139.35	43.75	161.36	48.65	76.61
66	E25a_E26a	KnownJunction	0	172.71	20.52	167.87	55.05	173.33	55.64	80.54
67	ER26a	ExonRegion	0	289.90	95.32	395.91	200.96	322.54	195.52	156.75
68	E26a_E27a	KnownJunction	0	236.21	103.59	280.26	133.40	344.36	166.24	125.16
69	ER27a	ExonRegion	0	249.35	93.80	304.42	165.23	438.18	148.63	148.64
70	E27a_E28a	KnownJunction	0	288.17	92.71	295.87	131.47	518.27	136.76	189.89
71	I27_AR1	ActiveIntronRegion	1	20.19	7.64	47.83	25.10	2.75	11.86	1.78
72	I27_SR1	SilentIntronRegion	1	12.76	8.13	43.62	28.71	2.41	12.71	1.65
73	ER28a	ExonRegion	0	428.98	115.92	408.79	175.46	705.41	184.77	229.75
74	E28_Da	NovelBoundary	1	182.57	0.00	172.90	1.03	0.00	0.00	0.00
75	E28a_E29a	KnownJunction	0	369.05	103.85	373.00	166.39	665.84	178.54	206.32
76	ER29a	ExonRegion	0	264.64	69.87	272.26	123.16	512.47	141.99	175.22
77	E29a_E30a	KnownJunction	0	159.49	28.71	187.83	69.98	366.70	90.93	97.20
78	ER30a	ExonRegion	0	189.82	49.23	239.56	107.46	371.59	116.38	153.06
79	E30a_E31a	KnownJunction	0	181.17	44.14	189.08	69.16	289.47	87.07	133.14
80	E30a_E32a	NovelJunction	1	12.82	0.00	7.70	13.74	1.15	0.00	4.46
81	ER31a	ExonRegion	0	180.72	56.23	235.15	79.39	337.03	119.34	132.84
82	E31a_E32a	KnownJunction	1	171.97	53.46	219.62	54.72	298.79	120.46	110.80
83	ER32a	ExonRegion	0	162.01	65.34	227.28	92.98	302.79	145.59	144.60
84	E32a_E33a	KnownJunction	0	150.23	77.16	229.31	119.88	298.72	156.89	153.06
85	ER33a	ExonRegion	0	134.57	85.12	203.58	122.10	311.64	180.47	157.30
86	E33a_E34a	KnownJunction	0	138.08	85.28	188.85	131.85	382.40	186.20	156.97
87	ER34a	ExonRegion	0	203.60	70.91	260.39	152.32	414.59	183.34	187.16
88	E34a_E35a	KnownJunction	0	170.15	71.93	235.85	172.30	416.31	190.79	169.57
89	ER35a	ExonRegion	0	233.40	91.34	274.36	172.01	429.92	196.00	187.71
90	E35_Ab	KnownBoundary	0	315.39	82.62	302.42	141.50	564.96	172.38	159.98
91	ER35b	ExonRegion	0	294.32	84.32	289.59	173.16	608.37	196.23	224.62
92	E35a_E36a	KnownJunction	0	291.07	104.03	309.98	207.49	706.27	198.37	274.85
93	ER36a	ExonRegion	0	373.33	137.15	389.70	223.60	661.72	276.81	259.74
94	E36a_E37a	KnownJunction	0	454.13	152.74	387.01	232.77	584.99	332.61	208.91
95	ER37a	ExonRegion	0	253.09	92.85	271.11	162.44	475.22	222.83	173.80
96	E37a_E38a	KnownJunction	0	166.78	82.33	203.53	142.34	304.90	236.05	126.83
97	ER38a	ExonRegion	0	158.31	83.00	232.98	139.71	286.67	243.33	150.35
98	E38a_E39a	KnownJunction	0	159.26	76.82	215.60	170.94	232.30	285.87	155.93
99	ER39a	ExonRegion	0	161.01	76.24	224.51	155.14	236.22	274.59	141.51
100	E39a_E40a	KnownJunction	1	77.78	39.30	124.95	112.64	150.58	188.62	83.80
101	ER40a	ExonRegion	0	81.64	31.78	110.91	67.34	148.34	109.08	63.46
102	E40_Da	KnownBoundary	0	53.04	24.09	94.93	45.16	100.51	59.98	46.84
103	ER40b	ExonRegion	0	22.91	8.17	39.80	18.96	47.82	26.28	15.81
104	ER41a	ExonRegion	0	0.00	0.00	0.03	0.00	0.00	0.00	0.00