Order SeqName SeqType IsAE Lum_Epi Lum_Epi2 Myo_Epi Myo_Epi2 hESCs StemLike vHMECs 1 DGKI Gene 0 0.03 2.87 1.68 2.27 1.22 5.54 0.18 2 288490 Transcript 0 0.03 1.74 1.43 1.85 0.89 3.54 0.06 3 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.23 0.00 4 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5 I1_AR12 ActiveIntronRegion 0 1.22 0.23 0.32 3.04 0.00 10.22 0.81 6 I1_AR13 ActiveIntronRegion 0 0.33 0.31 0.81 2.68 0.48 28.17 1.04 7 ER2a ExonRegion 0 0.00 0.00 0.47 0.00 0.57 0.35 0.47 8 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 2.03 4.23 0.00 9 ER3a ExonRegion 0 0.00 0.00 0.84 0.99 1.30 1.53 0.00 10 E3a_E4a KnownJunction 0 0.00 0.00 1.68 0.00 2.01 0.00 0.00 11 ER4a ExonRegion 0 0.00 0.00 0.73 0.00 1.36 1.24 0.00 12 E4a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13 ER5a ExonRegion 0 0.00 0.00 0.43 0.00 2.22 2.99 0.00 14 E5a_E6a KnownJunction 0 0.00 0.00 0.89 0.00 4.31 5.79 0.00 15 ER6a ExonRegion 0 0.00 0.00 0.86 0.93 1.21 4.37 0.00 16 E6a_E7a KnownJunction 0 0.00 0.00 0.55 1.57 0.00 4.45 0.00 17 ER7a ExonRegion 0 0.00 0.00 0.22 0.47 1.72 3.97 0.00 18 E7a_E8a KnownJunction 0 0.00 0.00 0.68 0.00 0.00 2.68 0.00 19 ER8a ExonRegion 0 0.00 0.00 0.79 1.62 1.06 3.16 0.00 20 E8a_E9a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 21 ER9a ExonRegion 0 0.00 0.00 1.75 2.66 0.00 0.64 0.00 22 E9a_E10a KnownJunction 0 0.00 0.00 3.03 4.17 0.00 1.66 0.00 23 ER10a ExonRegion 0 0.00 0.00 2.61 4.48 0.83 2.01 0.30 24 E10a_E11a KnownJunction 0 0.00 0.00 3.77 7.99 0.00 4.88 0.89 25 ER11a ExonRegion 0 0.00 0.00 3.21 5.41 0.00 4.14 0.26 26 E11a_E12a KnownJunction 0 0.00 0.00 2.74 6.34 0.00 6.54 0.00 27 ER12a ExonRegion 0 0.00 0.00 4.35 3.86 0.00 5.53 0.63 28 E12a_E13a KnownJunction 0 0.00 0.00 5.00 0.00 0.00 0.00 0.72 29 ER13a ExonRegion 0 0.00 0.00 2.71 0.80 0.01 6.12 0.11 30 E13a_E14a KnownJunction 0 0.00 0.00 1.67 0.00 0.00 4.26 0.00 31 ER14a ExonRegion 0 0.00 0.00 1.92 0.69 1.16 4.63 0.00 32 E14a_E15a KnownJunction 0 0.00 0.00 3.12 0.00 0.00 1.47 0.00 33 ER15a ExonRegion 0 0.00 0.00 3.29 0.00 0.86 4.39 0.00 34 E15a_E16a KnownJunction 0 0.00 0.00 2.40 0.00 2.17 2.57 0.00 35 ER16a ExonRegion 0 0.00 0.00 1.26 0.85 1.58 1.49 0.00 36 E16a_E17a KnownJunction 0 0.00 0.00 1.09 1.68 0.92 0.00 0.00 37 ER17a ExonRegion 0 0.00 0.00 3.32 1.11 1.95 0.62 0.00 38 E17a_E18a KnownJunction 0 0.00 0.00 2.85 1.33 0.95 1.66 0.00 39 ER18a ExonRegion 0 0.00 0.00 1.68 1.62 0.61 1.64 0.03 40 E18a_E19a KnownJunction 0 0.00 0.00 0.00 1.68 1.91 1.39 0.00 41 ER19a ExonRegion 0 0.11 0.00 0.00 2.15 0.48 4.69 0.44 42 E19a_E20a KnownJunction 0 0.78 0.00 0.00 3.28 0.97 7.13 0.00 43 ER20a ExonRegion 0 0.13 0.01 0.63 1.86 1.19 6.84 0.00 44 E20a_E21a KnownJunction 0 0.00 0.00 0.89 0.00 0.00 1.15 0.00 45 ER21a ExonRegion 0 0.00 0.89 0.29 2.81 0.41 3.67 0.00 46 E21a_E22a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 47 I21_AR3 ActiveIntronRegion 0 55.47 84.34 67.03 83.65 153.09 75.09 99.88 48 ER22a ExonRegion 0 0.00 0.76 0.00 0.00 0.00 1.23 0.00 49 E22_Da NovelBoundary 0 5.67 2.65 4.25 3.12 0.00 8.23 5.98 50 E22a_E23a KnownJunction 0 0.00 1.63 0.00 0.00 0.00 2.25 0.00 51 ER23a ExonRegion 0 0.00 0.73 0.78 2.56 0.52 5.50 0.00 52 E23a_E24a KnownJunction 0 0.00 0.00 1.47 4.31 0.00 6.38 0.00 53 ER24a ExonRegion 0 0.00 1.21 1.35 5.21 0.99 4.99 0.00 54 E24a_E25a KnownJunction 0 0.00 1.47 0.75 4.98 2.33 4.18 0.00 55 ER25a ExonRegion 0 0.00 0.43 0.53 1.87 1.72 2.75 0.00 56 E25a_E26a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 57 E26a_E27a KnownJunction 0 0.72 4.33 0.62 1.16 0.00 0.00 0.00 58 ER26a ExonRegion 0 0.00 0.00 1.35 1.47 0.00 0.00 0.00 59 ER27a ExonRegion 0 0.00 9.04 1.63 1.48 1.13 2.91 0.00 60 E27a_E28a KnownJunction 0 0.00 7.33 0.62 2.98 1.15 0.00 0.00 61 ER28a ExonRegion 0 0.00 7.58 1.84 1.72 1.17 1.93 0.00 62 E28a_E29a KnownJunction 0 0.00 6.59 4.50 2.71 0.00 2.84 0.00 63 E29a_E30a KnownJunction 0 0.00 1.63 0.62 0.00 0.00 4.53 0.00 64 ER29a ExonRegion 0 0.00 7.06 3.83 1.82 0.00 5.05 0.00 65 ER30a ExonRegion 0 0.00 6.75 2.69 3.05 0.77 8.03 0.00 66 E30a_E31a KnownJunction 0 0.00 7.22 2.21 4.63 1.15 10.24 0.00 67 ER31a ExonRegion 0 0.00 9.82 1.25 6.17 1.81 10.16 0.00 68 E31a_E32a KnownJunction 0 0.00 4.70 0.00 3.25 0.00 6.46 0.00 69 ER32a ExonRegion 0 0.00 7.32 0.90 2.43 0.70 9.18 0.00 70 E32a_E33a KnownJunction 0 0.00 11.09 1.15 1.16 1.15 10.16 0.00 71 ER33a ExonRegion 0 0.00 5.48 1.60 3.01 2.05 6.67 0.00 72 E33a_E34a KnownJunction 0 0.00 8.51 2.17 4.25 7.45 8.50 0.00 73 ER34a ExonRegion 0 0.07 5.25 2.46 3.27 1.90 9.24 0.39