Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	EPHA1	Gene	0	15.01	13.23	14.03	11.46	291.84	2.16	21.80
2	275815	Transcript	0	14.63	12.61	12.53	10.09	317.41	1.74	21.88
3	ER1a	ExonRegion	0	4.95	4.76	1.77	2.24	26.13	0.00	2.47
4	E1a_E2a	KnownJunction	0	1.45	3.70	1.38	0.00	15.45	0.00	1.69
5	ER2a	ExonRegion	0	4.99	13.54	4.51	6.25	52.94	1.19	6.42
6	E2a_E3a	KnownJunction	0	9.53	18.15	9.97	14.11	95.42	1.10	10.75
7	E3_Aa	NovelBoundary	0	4.16	26.88	7.31	24.71	0.00	15.41	2.28
8	ER3a	ExonRegion	0	10.12	19.29	14.42	27.03	190.36	8.50	17.36
9	E3_Da	NovelBoundary	0	3.91	6.78	5.73	12.49	13.28	21.44	2.72
10	E3a_E4a	KnownJunction	0	6.58	10.04	6.45	3.06	187.58	1.66	10.12
11	I3_AR1	ActiveIntronRegion	0	2.72	9.92	5.72	10.16	5.38	11.54	0.79
12	ER4a	ExonRegion	0	6.97	8.58	6.35	8.32	145.26	0.75	9.91
13	E4a_E5a	KnownJunction	0	9.38	5.33	6.65	4.61	182.90	1.13	21.44
14	ER5a	ExonRegion	0	9.85	13.57	6.87	6.38	144.86	0.68	16.31
15	E5a_E6a	KnownJunction	0	6.31	7.62	8.49	2.55	122.92	1.34	12.33
16	ER6a	ExonRegion	0	7.51	6.65	11.60	6.36	154.80	2.12	14.47
17	E6a_E7a	KnownJunction	0	12.33	10.22	8.42	7.31	221.88	3.16	21.88
18	ER7a	ExonRegion	0	13.44	13.84	13.62	7.58	234.23	3.76	23.43
19	E7a_E8a	KnownJunction	0	18.23	16.13	13.74	9.83	330.81	4.37	24.95
20	ER8a	ExonRegion	0	16.18	17.35	16.22	15.41	311.92	2.44	30.49
21	E8a_E9a	KnownJunction	0	12.93	12.11	13.21	17.28	264.99	0.00	21.84
22	ER9a	ExonRegion	0	9.57	10.88	11.73	9.94	322.32	0.00	23.73
23	E9a_E10a	KnownJunction	0	12.67	3.55	7.16	5.31	324.58	0.00	17.28
24	E10_Aa	NovelBoundary	1	1.03	1.10	0.59	11.54	6.55	0.00	1.59
25	ER10a	ExonRegion	0	8.23	9.43	7.49	11.05	268.38	0.87	18.25
26	E10a_E11a	KnownJunction	0	11.28	15.37	8.03	18.21	365.53	1.63	19.55
27	ER11a	ExonRegion	0	12.63	12.05	12.80	16.91	334.53	1.42	23.33
28	E11a_E12a	KnownJunction	0	12.62	14.03	11.30	13.27	369.15	2.63	23.69
29	ER12a	ExonRegion	0	24.46	19.57	21.25	14.23	483.09	1.60	32.73
30	E12a_E13a	KnownJunction	0	24.27	18.63	17.62	6.99	602.00	2.22	36.56
31	E13_Aa	NovelBoundary	1	10.28	6.57	8.84	6.61	5.05	4.50	0.00
32	ER13a	ExonRegion	0	30.01	19.83	22.06	9.47	584.84	0.42	34.85
33	E13_Da	NovelBoundary	1	13.84	8.33	11.80	4.04	1.06	6.62	1.95
34	E13a_E14a	KnownJunction	0	30.24	19.34	22.62	13.82	458.43	0.00	29.52
35	ER14a	ExonRegion	0	31.28	14.78	24.18	13.30	571.16	1.81	35.80
36	E14a_E15a	KnownJunction	0	12.70	9.96	16.51	11.00	487.66	0.00	28.52
37	ER15a	ExonRegion	0	23.53	17.86	21.29	16.10	550.43	2.17	34.72
38	E15_Da	NovelBoundary	0	5.47	4.68	9.56	1.30	9.96	0.00	3.91
39	E15a_E16a	KnownJunction	0	19.38	12.35	12.21	10.46	473.04	2.71	26.79
40	E16_Aa	NovelBoundary	0	2.42	10.61	3.41	4.12	2.28	1.55	1.48
41	ER16a	ExonRegion	0	18.87	17.38	16.56	13.97	493.07	1.54	30.49
42	E16a_E17a	KnownJunction	0	10.71	6.02	11.35	6.56	435.35	1.39	19.86
43	I16_AR3	ActiveIntronRegion	0	5.94	6.71	10.71	4.96	1.77	4.88	8.26
44	E17_Aa	NovelBoundary	1	1.72	7.86	7.76	6.45	0.00	8.90	17.67
45	ER17a	ExonRegion	0	17.19	14.02	14.78	14.04	403.99	4.38	30.28
46	E17_Da	NovelBoundary	1	0.85	10.17	9.34	7.18	5.90	3.86	10.88
47	E17a_E18a	KnownJunction	0	29.06	11.82	15.95	2.60	584.67	2.63	29.01
48	E18_Aa	NovelBoundary	1	3.61	4.39	9.83	6.53	0.00	1.66	9.63
49	ER18a	ExonRegion	0	22.71	13.62	20.00	7.57	314.61	1.31	25.03