Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	AGBL3	Gene	0	1.70	2.34	2.56	5.00	3.95	4.72	0.54
2	359383	Transcript	0	3.10	4.00	2.44	3.85	14.22	3.43	0.91
3	275763	Transcript	0	1.07	1.11	1.26	2.10	0.34	3.64	0.08
4	IG32	Intergenic	0	4.43	2.75	4.88	18.55	0.58	1.77	1.71
5	IG32_SR3	SilentIntergenicRegion	0	4.70	2.85	5.29	19.16	0.57	1.69	1.81
6	IG32_AR4	ActiveIntergenicRegion	0	2.42	2.71	2.09	17.86	0.63	3.65	0.48
7	ER1a	ExonRegion	0	0.99	1.90	1.10	6.87	3.69	5.39	0.00
8	E1_Da	NovelBoundary	0	0.00	7.62	1.54	15.63	1.18	0.00	0.89
9	E1a_E2a	KnownJunction	0	3.54	5.04	4.66	14.55	4.45	15.25	0.00
10	I1	Intron	0	4.30	4.18	6.10	19.21	8.76	4.23	2.16
11	I1_AR1	ActiveIntronRegion	0	4.30	4.19	6.10	19.24	8.77	4.24	2.16
12	E2_Aa	NovelBoundary	0	2.20	4.02	3.99	25.49	13.62	2.44	4.16
13	ER2a	ExonRegion	0	6.93	17.57	11.88	28.40	18.77	22.76	3.22
14	E2_Da	NovelBoundary	0	6.86	8.01	2.16	15.52	6.43	1.66	3.04
15	E2a_E3a	KnownJunction	0	3.50	9.83	3.02	14.22	23.81	16.48	4.33
16	E2a_E4a	NovelJunction	0	1.74	1.63	1.78	19.78	0.00	6.81	1.75
17	I2	Intron	0	3.76	1.90	4.31	10.60	6.35	1.62	1.33
18	I2_AR1	ActiveIntronRegion	0	3.77	1.91	4.32	10.62	6.36	1.62	1.34
19	E3_Aa	NovelBoundary	0	1.72	2.57	3.72	12.87	7.15	8.79	4.41
20	ER3a	ExonRegion	0	3.41	8.15	4.40	9.08	14.22	11.96	1.82
21	E3_Da	NovelBoundary	0	3.22	0.00	7.10	24.87	13.00	4.61	2.26
22	E3a_E4a	KnownJunction	0	2.90	10.11	5.32	3.85	5.72	11.12	0.00
23	I3_AR1	ActiveIntronRegion	0	5.74	3.90	2.73	14.98	5.26	2.22	1.84
24	ER4a	ExonRegion	0	3.13	7.02	3.90	13.92	9.21	8.70	1.66
25	E4a_E5a	KnownJunction	0	1.00	4.31	0.00	4.17	2.70	2.55	0.00
26	E4a_E6a	KnownJunction	0	1.03	0.00	1.52	5.82	0.00	2.33	0.00
27	I4_AR6	ActiveIntronRegion	0	1.38	1.85	1.91	7.13	8.62	1.10	1.06
28	I4_AR8	ActiveIntronRegion	0	1.80	4.23	1.15	10.19	6.80	2.59	0.92
29	ER5a	ExonRegion	0	5.20	3.69	4.88	3.52	25.74	4.32	1.81
30	E5_Da	NovelBoundary	0	91.44	70.46	62.65	54.91	59.22	81.87	50.82
31	ER6a	ExonRegion	0	0.99	2.16	0.92	3.23	0.00	5.20	0.95
32	E6a_E7a	KnownJunction	0	2.54	2.63	0.59	2.79	0.00	1.45	0.00
33	ER7a	ExonRegion	0	1.55	2.60	1.80	3.57	0.59	4.32	0.37
34	E7a_E8a	KnownJunction	0	0.00	1.52	0.00	0.00	0.00	1.10	0.00
35	ER8a	ExonRegion	0	1.34	0.92	2.37	4.01	1.05	2.77	0.26
36	E8_Da	NovelBoundary	0	3.24	1.39	2.26	8.32	0.00	6.14	0.63
37	E8a_E9a	KnownJunction	0	0.00	1.23	0.00	0.00	0.00	0.00	0.00
38	ER9a	ExonRegion	0	0.36	1.58	0.66	3.11	0.25	0.57	0.00
39	E9a_E10a	KnownJunction	0	0.00	0.00	0.55	1.68	0.00	0.00	0.00
40	ER10a	ExonRegion	0	1.24	1.49	2.88	3.75	0.24	8.94	0.00
41	E10a_E11a	KnownJunction	0	3.07	0.00	2.62	1.63	1.04	3.32	0.00
42	ER11a	ExonRegion	0	1.53	1.01	1.03	3.79	0.52	6.66	0.00
43	E11a_E12a	KnownJunction	0	0.90	1.13	0.89	1.68	0.00	8.28	0.00
44	ER12a	ExonRegion	0	0.17	1.51	0.67	2.11	0.37	3.73	0.00
45	E12a_E13a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
46	ER13a	ExonRegion	0	0.86	0.00	0.00	0.72	0.62	0.00	0.00
47	E13a_E14a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
48	ER14a	ExonRegion	0	0.61	0.69	2.25	1.25	0.10	2.34	0.00
49	E14a_E15a	KnownJunction	0	0.90	1.63	3.95	1.00	0.90	5.92	0.00
50	ER15a	ExonRegion	0	1.79	2.40	3.24	2.01	0.48	5.40	0.00
51	E15a_E16a	KnownJunction	0	2.90	2.84	1.61	2.82	0.00	5.92	0.00
52	ER16a	ExonRegion	0	2.70	1.01	1.45	1.74	0.67	10.48	0.00
53	E16a_E17a	KnownJunction	0	2.05	0.00	0.89	1.68	0.00	9.89	0.00
54	ER17a	ExonRegion	0	0.85	0.44	0.39	1.59	1.64	3.39	0.01
55	E17a_E18a	KnownJunction	0	0.00	1.50	0.00	1.41	0.00	0.00	0.00
56	ER18a	ExonRegion	0	0.52	0.50	2.53	3.14	0.34	2.49	0.41