Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	NRF1	Gene	0	22.99	72.34	41.97	71.89	54.94	70.83	26.90
2	393232	Transcript	0	0	0	0	0	0	0	0
3	353868	Transcript	1	2.62	14.90	2.89	37.28	1.01	39.32	1.59
4	393231	Transcript	0	0	0	0	0	0	0	0
5	311967	Transcript	0	0	0	0	0	0	0	0
6	223190	Transcript	0	0	0	0	0	0	0	0
7	393230	Transcript	0	2.27	2.63	7.97	4.85	0.91	6.41	1.12
8	IG40_AR6	ActiveIntergenicRegion	0	1.99	1.65	2.46	1.21	8.86	1.66	1.71
9	IG40_SR7	SilentIntergenicRegion	0	1.78	2.49	3.07	1.06	11.04	0.35	3.99
10	IG40_AR9	ActiveIntergenicRegion	0	1.58	1.51	2.71	1.60	8.29	0.52	3.30
11	ER1a	ExonRegion	0	1.72	7.40	4.19	15.95	6.95	6.36	0.64
12	E1_Ab	KnownBoundary	0	4.57	16.68	13.01	31.94	11.11	18.81	4.46
13	ER1b	ExonRegion	0	13.64	65.23	22.00	77.40	67.05	62.76	17.15
14	E1a_E2a	NovelJunction	0	0.77	8.88	8.05	4.74	3.48	5.07	1.29
15	E1a_E3a	KnownJunction	0	8.43	39.54	10.81	44.75	19.92	63.33	8.58
16	E1a_E3b	KnownJunction	0	6.06	29.21	4.80	16.96	9.59	13.59	5.66
17	ER2a	ExonRegion	0	3.58	2.28	6.19	4.08	1.82	8.23	2.24
18	E2_Da	NovelBoundary	1	5.24	0.00	1.72	0.00	0.88	1.02	8.63
19	E2a_E3a	KnownJunction	0	0.95	2.97	9.74	5.61	0.00	4.58	0.00
20	I2_AR3	ActiveIntronRegion	1	6.00	1.86	3.23	2.43	2.15	0.34	8.37
21	I2_SR2	SilentIntronRegion	1	4.67	3.69	3.22	1.81	1.54	1.05	9.40
22	ER3a	ExonRegion	0	14.41	70.46	26.25	62.35	19.84	85.82	15.18
23	ER3b	ExonRegion	0	28.68	132.70	55.47	122.21	69.76	135.55	38.97
24	E3a_E4a	KnownJunction	0	36.33	164.72	76.09	151.57	93.04	131.80	52.24
25	E3a_E5a	NovelJunction	0	1.03	7.93	3.10	16.69	4.98	7.18	0.00
26	ER4a	ExonRegion	0	40.51	192.96	86.27	180.63	83.87	162.40	49.69
27	E4a_E5a	KnownJunction	0	49.70	191.99	106.63	195.46	78.68	163.93	53.83
28	ER5a	ExonRegion	0	40.44	203.54	98.08	186.20	89.65	132.79	58.60
29	E5a_E6a	KnownJunction	0	34.68	140.84	72.58	174.49	79.72	112.93	44.79
30	ER6a	ExonRegion	0	37.34	143.15	66.13	134.87	74.83	96.72	38.60
31	E6a_E7a	KnownJunction	0	42.96	94.81	59.69	113.11	68.44	75.44	35.18
32	E7_Aa	NovelBoundary	1	15.19	0.00	19.07	2.25	0.00	1.66	2.57
33	ER7a	ExonRegion	0	51.92	123.98	83.90	133.06	108.37	106.90	39.97
34	E7a_E8a	KnownJunction	0	66.94	137.58	91.35	132.31	142.74	114.97	40.99
35	E7a_E9a	KnownJunction	1	2.62	14.90	2.89	37.28	1.01	39.32	1.59
36	ER8a	ExonRegion	0	57.40	124.88	93.47	106.08	125.10	85.97	59.15
37	E8a_E9a	KnownJunction	0	24.92	97.70	47.70	74.64	68.05	69.46	45.59
38	ER9a	ExonRegion	0	22.26	107.47	60.55	93.72	77.98	93.32	46.26
39	E9a_E10a	KnownJunction	0	29.54	110.73	52.22	103.65	62.63	95.89	51.16
40	ER10a	ExonRegion	0	19.39	97.48	36.09	91.71	67.89	87.27	41.93
41	E10a_E11a	KnownJunction	0	15.10	84.41	47.61	91.05	46.31	64.56	26.44
42	I10_AR1	ActiveIntronRegion	0	10.33	13.70	9.78	9.15	4.36	5.37	4.93
43	ER11a	ExonRegion	0	22.38	85.79	36.22	80.17	57.54	71.57	34.08
44	E11a_E12a	KnownJunction	0	0.00	0.00	0.00	0.00	1.18	0.00	0.00
45	E11a_E13a	KnownJunction	0	36.92	83.81	38.99	81.33	72.62	44.35	34.62
46	I11_AR6	ActiveIntronRegion	0	9.58	17.57	10.54	22.87	8.67	15.46	5.98
47	ER12a	ExonRegion	0	0.00	0.00	1.83	1.84	1.11	0.06	0.40
48	E12a_E13a	KnownJunction	0	0.00	0.00	2.33	3.36	0.00	0.00	0.86
49	I12_AR6	ActiveIntronRegion	0	3.43	12.09	4.09	9.33	1.48	14.17	3.26
50	I12_AR7	ActiveIntronRegion	0	17.06	14.82	18.42	7.23	4.99	19.71	3.99
51	I12_AR8	ActiveIntronRegion	0	9.70	11.59	10.10	13.13	5.28	11.21	3.53
52	I12_AR11	ActiveIntronRegion	1	1.79	9.23	2.94	20.16	2.82	4.84	2.51
53	I12_AR12	ActiveIntronRegion	1	2.05	12.96	4.06	15.38	0.81	4.36	2.02
54	ER13a	ExonRegion	0	24.48	46.96	37.84	47.65	49.15	49.80	21.65
55	E13_Da	KnownBoundary	0	5.77	44.11	15.53	26.50	32.27	44.76	12.34
56	ER13b	ExonRegion	0	8.83	31.95	20.26	40.13	30.55	55.28	13.83
57	IG41_AR6	ActiveIntergenicRegion	0	3.56	7.63	2.24	2.86	0.55	0.96	3.57
58	IG41_AR8	ActiveIntergenicRegion	0	4.35	11.98	0.76	6.41	0.27	1.60	2.94
59	IG41_SR7	SilentIntergenicRegion	0	2.55	9.40	1.57	2.76	0.90	1.04	4.17