Order SeqName SeqType IsAE Lum_Epi Lum_Epi2 Myo_Epi Myo_Epi2 hESCs StemLike vHMECs 1 NRCAM Gene 0 1.53 0.03 94.10 1.48 18.62 1.25 208.87 2 379022 Transcript 0 0.87 0.00 0.66 0.00 3.14 0.00 0.00 3 379024 Transcript 0 0.38 0.00 25.36 0.00 0.59 0.00 81.22 4 351718 Transcript 0 3.38 0.00 77.42 0.94 15.42 1.78 209.51 5 379028 Transcript 0 0 0 0 0 0 0 0 6 379032 Transcript 0 0.00 0.00 0.08 0.00 0.00 0.00 0.08 7 379027 Transcript 0 0.45 0.00 0.73 0.00 0.48 0.00 0.61 8 IG24_AR6 ActiveIntergenicRegion 0 30.48 13.48 23.87 13.86 4.33 48.19 5.04 9 IG24_AR5 ActiveIntergenicRegion 0 9.63 5.00 9.40 6.67 0.84 22.36 0.88 10 IG24_SR4 SilentIntergenicRegion 0 4.35 2.76 4.75 3.60 0.19 8.49 0.16 11 IG24_AR4 ActiveIntergenicRegion 0 5.86 4.87 8.32 5.06 0.10 8.25 0.87 12 ER1a ExonRegion 0 0.00 0.00 4.61 0.68 0.30 0.28 14.14 13 E1a_E2a KnownJunction 0 0.00 0.00 15.06 0.00 0.00 1.66 35.76 14 ER2a ExonRegion 0 0.89 0.00 51.19 1.07 3.64 2.06 83.73 15 E2a_E3a KnownJunction 0 0.85 0.00 74.47 1.30 9.11 0.00 106.28 16 ER3a ExonRegion 0 1.24 0.00 85.28 0.47 8.41 1.04 146.45 17 E3a_E4a KnownJunction 0 1.03 0.00 80.98 1.06 7.75 1.42 158.98 18 ER4a ExonRegion 0 2.81 0.00 123.46 2.19 9.91 1.13 223.19 19 E4a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 20 E4a_E7a KnownJunction 0 4.39 0.00 107.29 1.60 17.11 1.42 214.43 21 E5a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 22 ER5a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 23 E6a_E7a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 24 ER6a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 25 ER7a ExonRegion 0 2.87 0.00 110.48 2.72 13.56 1.11 213.51 26 E7a_E8a KnownJunction 0 1.02 0.00 106.87 0.00 20.54 1.66 216.46 27 ER8a ExonRegion 0 0.90 0.56 119.44 1.92 16.76 1.38 265.40 28 E8a_E9a KnownJunction 0 0.97 1.21 122.78 3.33 8.99 1.66 196.04 29 ER9a ExonRegion 0 1.26 0.60 149.18 3.80 20.12 1.45 295.52 30 E9a_E10a KnownJunction 0 2.82 0.00 121.99 0.00 6.34 3.16 190.55 31 ER10a ExonRegion 0 1.77 0.00 118.80 1.31 13.49 0.36 198.13 32 E10a_E11a KnownJunction 1 0.00 0.00 57.47 1.63 10.07 0.00 32.12 33 E10a_E12a KnownJunction 0 0.77 0.00 50.02 0.00 1.18 0.00 161.73 34 ER11a ExonRegion 1 0.00 0.00 64.21 1.03 7.93 1.23 29.97 35 E11a_E12a KnownJunction 1 0.00 0.00 65.84 0.00 3.57 1.37 28.68 36 ER12a ExonRegion 0 2.57 0.00 134.03 0.87 18.94 0.49 211.02 37 E12a_E13a KnownJunction 0 4.92 0.00 129.69 0.00 29.95 1.50 253.55 38 ER13a ExonRegion 0 3.65 0.00 160.06 1.15 25.33 2.58 269.09 39 E13a_E14a KnownJunction 0 3.57 0.00 124.29 1.38 21.44 1.66 195.65 40 E14_Aa NovelBoundary 1 1.20 0.00 41.88 0.00 0.00 0.00 1.59 41 ER14a ExonRegion 0 1.88 0.00 119.99 4.18 21.31 2.49 231.98 42 E14a_E15a KnownJunction 0 1.72 0.00 117.64 2.87 26.58 2.76 191.45 43 ER15a ExonRegion 0 0.45 0.00 103.20 1.45 19.71 0.43 211.94 44 E15a_E16a KnownJunction 0 0.00 0.00 120.09 2.41 14.75 1.50 238.36 45 ER16a ExonRegion 0 1.06 0.00 101.41 1.99 16.52 0.79 215.75 46 E16a_E17a KnownJunction 0 0.98 0.00 117.31 2.82 29.88 1.61 239.55 47 ER17a ExonRegion 0 0.89 0.00 107.68 1.90 22.31 1.52 282.65 48 E17a_E18a KnownJunction 0 1.84 0.00 86.55 0.00 16.76 1.53 247.86 49 ER18a ExonRegion 0 1.47 0.00 91.64 2.11 33.70 2.28 398.29 50 E18a_E19a KnownJunction 0 2.67 0.00 97.73 1.65 27.36 0.00 450.01 51 ER19a ExonRegion 1 1.87 0.00 69.65 0.69 18.10 0.87 350.54 52 E19a_E20a KnownJunction 0 0.00 0.00 0.00 0.00 2.01 0.00 0.67 53 E19a_E21a KnownJunction 0 2.29 0.00 72.33 1.22 14.87 3.91 281.67 54 E20a_E21a KnownJunction 0 0.00 0.00 0.89 0.00 2.17 0.00 0.80 55 ER20a ExonRegion 0 0.00 0.00 0.75 0.00 2.29 0.00 1.53 56 ER21a ExonRegion 0 2.74 0.00 92.97 1.63 32.59 2.25 426.92 57 E21a_E22a KnownJunction 0 2.15 0.00 75.66 0.00 17.87 2.95 218.05 58 ER22a ExonRegion 0 1.67 0.00 73.48 1.27 14.53 0.63 196.99 59 E22a_E23a KnownJunction 0 0.00 0.00 80.50 1.57 11.34 0.00 177.01 60 ER23a ExonRegion 0 0.26 0.00 78.92 0.47 18.42 0.95 205.63 61 E23a_E24a KnownJunction 0 0.83 0.00 60.63 0.00 20.84 1.39 174.93 62 ER24a ExonRegion 0 0.87 0.00 72.96 3.00 15.15 1.07 211.71 63 E24a_E25a KnownJunction 0 2.64 0.00 59.18 6.75 22.57 3.06 213.55 64 ER25a ExonRegion 0 1.03 0.00 72.37 1.58 19.28 2.77 241.67 65 E25a_E26a KnownJunction 0 0.00 0.00 72.01 0.00 15.81 2.12 210.71 66 ER26a ExonRegion 0 1.25 0.00 66.87 1.41 14.40 3.74 199.36 67 E26a_E27a KnownJunction 0 2.75 0.00 49.68 1.11 7.93 0.00 129.67 68 ER27a ExonRegion 0 1.11 0.00 80.66 2.90 15.67 0.64 187.94 69 E27a_E28a KnownJunction 0 0.62 0.00 89.27 2.00 17.84 1.15 195.31 70 ER28a ExonRegion 0 2.97 0.00 80.73 2.71 16.78 0.08 179.50 71 E28a_E29a KnownJunction 0 0.00 0.00 0.89 0.00 0.00 0.00 2.44 72 E28a_E32a KnownJunction 0 3.47 0.00 52.65 0.00 14.29 0.00 132.42 73 ER29a ExonRegion 0 0.00 0.00 1.24 0.00 0.02 0.00 2.17 74 E29a_E30a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 75 E29a_E32a KnownJunction 0 0.00 0.00 0.69 0.00 0.00 0.00 0.72 76 ER30a ExonRegion 0 0.46 0.00 5.31 0.00 1.31 0.00 5.74 77 E30a_E31a KnownJunction 0 0.00 0.00 1.47 0.00 0.00 0.00 0.57 78 ER31a ExonRegion 0 0.00 0.00 4.03 0.00 0.55 0.00 2.69 79 E31a_E32a KnownJunction 0 0.00 0.00 1.26 0.00 0.00 0.00 0.00 80 ER32a ExonRegion 0 3.10 0.00 98.77 0.22 21.56 1.05 219.75 81 E32a_E33a KnownJunction 0 2.50 0.00 105.74 1.35 19.69 1.66 223.70 82 ER33a ExonRegion 0 3.63 0.00 113.41 0.90 29.34 1.78 261.32 83 E33a_E34a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 84 E33a_E36a KnownJunction 0 0.87 0.00 0.66 0.00 3.14 0.00 0.00 85 E33a_E37a KnownJunction 0 1.99 0.00 105.97 0.00 25.91 0.00 238.99 86 ER34a ExonRegion 0 0.00 0.00 0.17 0.00 0.00 0.00 0.17 87 ER35a ExonRegion 0 0.00 0.00 2.94 0.00 0.00 0.00 2.45 88 E35a_E36a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 89 ER36a ExonRegion 0 0.36 0.00 0.02 0.00 2.10 0.00 0.02 90 E36b_E37a KnownJunction 0 1.03 0.00 0.00 0.00 0.88 0.00 0.00 91 ER36b ExonRegion 0 0.77 0.00 0.00 0.00 1.04 0.00 0.00 92 ER37a ExonRegion 0 1.69 0.00 117.60 1.43 25.83 1.41 242.91