Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	AC011895.4	Gene	0	192.32	340.25	318.49	626.48	333.63	423.03	139.73
2	388793	Transcript	0	7.76	15.61	9.30	14.81	11.56	12.38	5.55
3	347433	Transcript	0	101.29	287.99	187.73	470.30	253.51	302.57	96.24
4	344056	Transcript	0	98.77	210.22	191.37	301.79	85.94	218.58	58.70
5	342198	Transcript	0	41.74	48.02	65.59	119.50	37.00	100.69	20.77
6	IG2	Intergenic	0	31.37	18.26	15.16	29.74	9.04	30.07	18.54
7	IG2_AR1	ActiveIntergenicRegion	0	38.56	20.43	18.27	32.70	11.13	34.46	22.52
8	IG2_SR1	SilentIntergenicRegion	0	9.12	13.47	5.50	23.63	2.62	18.83	6.64
9	ER1a	ExonRegion	0	42.45	113.67	69.55	226.34	58.43	127.87	41.47
10	E1a_E2a	KnownJunction	0	78.89	183.27	148.19	322.55	80.87	235.14	50.88
11	ER2a	ExonRegion	0	96.94	277.98	181.96	509.99	231.10	339.58	96.60
12	E2a_E3a	KnownJunction	0	7.11	16.34	7.72	17.34	16.78	10.93	4.99
13	E2a_E4a	KnownJunction	0	101.29	287.99	187.73	470.30	253.51	302.57	96.24
14	ER3a	ExonRegion	0	7.78	13.25	9.42	15.49	11.71	17.43	6.02
15	E3a_E4a	KnownJunction	0	8.40	17.23	10.78	11.59	6.20	8.76	5.65
16	ER4a	ExonRegion	0	102.84	328.72	186.64	533.53	206.03	351.57	87.15
17	E4a_E5a	KnownJunction	0	105.70	298.39	245.22	528.71	256.19	346.90	102.20
18	ER5a	ExonRegion	0	96.31	310.19	221.73	519.15	247.54	370.66	78.25
19	ER5b	ExonRegion	0	114.63	312.01	253.33	485.81	233.63	337.18	85.03
20	E5_Da	KnownBoundary	0	54.18	113.70	105.64	200.66	52.28	130.70	34.27
21	E5a_E5c	KnownJunction	0	98.77	210.22	191.37	301.79	85.94	218.58	58.70
22	E5_Ac	KnownBoundary	0	54.93	94.89	106.35	153.96	73.05	113.82	40.00
23	ER5c	ExonRegion	0	127.82	283.47	262.37	424.80	191.39	302.82	89.95
24	ER5d	ExonRegion	0	158.02	297.60	275.36	476.84	266.65	335.45	103.79
25	E5b_E6a	KnownJunction	0	186.59	332.07	317.50	569.67	381.32	414.73	112.57
26	E6_Aa	NovelBoundary	1	72.05	16.00	127.52	10.10	0.00	10.48	1.16
27	ER6a	ExonRegion	0	261.49	358.74	446.98	613.49	369.37	457.10	131.77
28	E6_Da	NovelBoundary	1	121.65	29.42	221.60	14.79	11.30	10.34	15.42
29	E6b_E7a	KnownJunction	0	187.13	300.73	384.54	520.56	302.34	371.12	115.37
30	ER6b	ExonRegion	0	207.86	309.18	407.11	550.53	322.73	372.70	120.75
31	I6	Intron	0	50.58	33.09	53.87	29.83	19.15	21.96	21.09
32	I6_AR1	ActiveIntronRegion	0	52.04	33.30	55.33	30.42	19.35	22.83	21.58
33	ER7a	ExonRegion	0	220.72	339.15	370.01	613.06	327.00	376.42	120.39
34	E7a_E8a	KnownJunction	0	237.11	357.11	372.18	687.65	400.36	359.55	174.97
35	ER8a	ExonRegion	0	210.11	406.61	370.26	745.19	386.79	448.87	185.49
36	E8a_E9a	KnownJunction	0	247.03	478.77	403.82	887.83	436.92	593.40	251.00
37	ER9a	ExonRegion	0	242.76	499.28	405.55	848.17	361.04	541.11	218.51
38	E9a_E10a	KnownJunction	0	228.70	477.46	404.65	881.60	471.82	536.05	217.75
39	ER10a	ExonRegion	0	184.82	388.73	328.17	698.82	401.21	442.41	178.73
40	E10a_E11a	KnownJunction	0	135.71	274.85	233.20	541.06	322.86	304.93	124.55
41	ER11a	ExonRegion	0	142.14	308.48	279.05	560.19	329.80	298.28	127.40
42	E11a_E12a	KnownJunction	0	142.15	332.28	252.67	630.30	375.92	309.43	131.55
43	ER12a	ExonRegion	0	148.11	351.19	267.73	606.08	316.55	338.24	132.95
44	E12a_E13a	KnownJunction	0	152.71	328.26	302.51	621.01	299.13	332.05	154.66
45	ER13a	ExonRegion	0	186.64	389.82	335.21	742.27	401.00	425.72	177.58
46	E13a_E14a	KnownJunction	0	225.53	427.46	396.29	923.43	349.53	526.91	185.08
47	ER14a	ExonRegion	0	189.24	460.02	319.19	821.71	366.74	536.40	191.12
48	E14a_E15a	KnownJunction	0	253.40	425.36	425.66	790.71	477.08	560.33	222.81
49	ER15a	ExonRegion	0	207.16	390.71	327.42	778.15	373.28	536.82	156.04
50	E15a_E16a	KnownJunction	0	220.72	504.49	406.41	964.52	423.60	620.49	200.61
51	ER16a	ExonRegion	0	250.35	496.29	442.88	935.41	430.88	615.44	199.26
52	E16_Ab	KnownBoundary	0	278.86	501.26	481.66	1048.91	434.87	653.73	214.74
53	ER16b	ExonRegion	0	253.03	483.44	440.36	1013.22	553.72	643.52	192.53
54	E16a_E17a	KnownJunction	0	195.62	400.30	359.49	810.16	423.60	529.83	146.91
55	ER17a	ExonRegion	0	406.27	519.29	644.45	948.39	671.83	697.85	237.06
56	E17a_E18a	KnownJunction	0	392.90	608.37	665.81	1118.89	474.66	900.39	268.36
57	ER18a	ExonRegion	0	452.77	489.37	675.13	895.85	607.71	720.44	249.79
58	E18a_E19a	KnownJunction	0	303.51	232.50	401.06	549.79	595.45	376.35	170.13
59	ER19a	ExonRegion	0	184.00	205.58	256.97	445.89	328.54	334.02	113.86
60	E19_Da	NovelBoundary	0	95.35	117.88	129.69	227.02	107.63	209.57	52.11
61	E19a_E19b	KnownJunction	0	41.74	48.02	65.59	119.50	37.00	100.69	20.77
62	E19b_E20a	KnownJunction	0	176.26	193.83	222.81	415.52	254.18	376.75	90.06
63	ER19b	ExonRegion	0	190.57	220.29	260.34	478.00	238.10	410.71	98.04
64	ER19c	ExonRegion	0	194.11	222.93	250.97	471.85	268.95	413.77	101.39
65	E20_Ab	NovelBoundary	0	139.41	177.70	163.85	394.91	264.99	332.75	84.18
66	ER20a	ExonRegion	0	188.06	233.38	235.44	498.06	298.96	420.58	106.37
67	ER20b	ExonRegion	0	181.61	234.87	219.92	514.58	304.50	418.07	109.28
68	ER20c	ExonRegion	0	136.18	227.86	171.35	510.35	214.42	376.92	93.58
69	E20b_E21a	KnownJunction	0	119.33	253.44	160.80	497.18	102.03	401.62	72.13
70	ER21a	ExonRegion	0	116.42	249.19	164.86	527.70	126.49	450.84	82.69
71	ER21b	ExonRegion	0	66.47	155.50	97.88	328.12	155.17	266.83	54.22
72	IG3	Intergenic	0	3.50	10.87	1.90	1.04	3.69	3.64	2.83
73	IG3_AR1	ActiveIntergenicRegion	0	3.53	10.98	1.92	1.04	3.73	3.67	2.86